PDB Chemical Component J0G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for J0G
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C22 |
N4 |
1.451 |
1.468 |
C22 |
C16 |
1.513 |
1.530 |
C16 |
N2 |
1.458 |
1.465 |
N2 |
C4 |
1.428 |
1.389 |
C23 |
C8 |
1.518 |
1.530 |
C4 |
C3 |
1.396 |
1.386 |
C4 |
C5 |
1.397 |
1.405 |
C3 |
C2 |
1.386 |
1.391 |
C8 |
N1 |
1.455 |
1.465 |
C8 |
C9 |
1.498 |
1.507 |
O1 |
C7 |
1.228 |
1.216 |
C7 |
N1 |
1.386 |
1.348 |
C7 |
C5 |
1.488 |
1.473 |
C5 |
C6 |
1.382 |
1.398 |
C2 |
C17 |
1.460 |
1.483 |
C2 |
C1 |
1.380 |
1.397 |
C17 |
C18 |
1.384 |
1.398 |
C17 |
C21 |
1.384 |
1.398 |
C18 |
C19 |
1.382 |
1.380 |
C21 |
C20 |
1.379 |
1.380 |
C6 |
C1 |
1.377 |
1.375 |
C19 |
N3 |
1.340 |
1.320 |
C20 |
N3 |
1.338 |
1.319 |
C9 |
C10 |
1.380 |
1.381 |
C9 |
C14 |
1.379 |
1.383 |
C10 |
C11 |
1.386 |
1.388 |
C15 |
O2 |
1.427 |
1.429 |
C14 |
C13 |
1.378 |
1.383 |
C11 |
O2 |
1.397 |
1.359 |
C11 |
C12 |
1.380 |
1.387 |
C13 |
C12 |
1.378 |
1.381 |
N1 |
H1 |
1.000 |
0.971 |
C6 |
H2 |
1.080 |
1.080 |
C8 |
H3 |
1.100 |
1.090 |
C10 |
H4 |
1.079 |
1.080 |
C13 |
H5 |
1.080 |
1.080 |
C15 |
H6 |
1.100 |
1.090 |
C15 |
H7 |
1.100 |
1.090 |
C15 |
H8 |
1.100 |
1.091 |
C20 |
H9 |
1.080 |
1.080 |
C21 |
H10 |
1.080 |
1.080 |
C22 |
H11 |
1.100 |
1.090 |
C22 |
H12 |
1.101 |
1.090 |
C1 |
H13 |
1.080 |
1.080 |
N2 |
H14 |
1.000 |
0.970 |
C3 |
H15 |
1.080 |
1.080 |
N4 |
H16 |
1.001 |
1.008 |
N4 |
H17 |
0.999 |
1.009 |
C12 |
H19 |
1.080 |
1.080 |
C14 |
H20 |
1.080 |
1.079 |
C16 |
H21 |
1.100 |
1.090 |
C16 |
H22 |
1.100 |
1.090 |
C18 |
H23 |
1.080 |
1.080 |
C19 |
H24 |
1.080 |
1.079 |
C23 |
H25 |
1.100 |
1.090 |
C23 |
H26 |
1.100 |
1.090 |
C23 |
H27 |
1.100 |
1.090 |
Bond Angles for J0G
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N4 |
C22 |
C16 |
108.7 |
109.5 |
N4 |
C22 |
H11 |
109.7 |
109.5 |
N4 |
C22 |
H12 |
109.6 |
109.5 |
C22 |
N4 |
H16 |
109.5 |
111.0 |
C22 |
N4 |
H17 |
109.5 |
111.0 |
C22 |
C16 |
N2 |
110.7 |
109.5 |
C16 |
C22 |
H11 |
109.7 |
109.4 |
C16 |
C22 |
H12 |
109.7 |
109.5 |
C22 |
C16 |
H21 |
109.1 |
109.4 |
C22 |
C16 |
H22 |
109.2 |
109.5 |
C16 |
N2 |
H14 |
106.3 |
119.9 |
N2 |
C4 |
C3 |
120.8 |
120.1 |
C23 |
C8 |
H3 |
108.5 |
109.5 |
C5 |
C4 |
C3 |
117.1 |
119.8 |
C4 |
C3 |
C2 |
122.7 |
120.0 |
C4 |
C3 |
H15 |
118.6 |
120.0 |
C4 |
C5 |
C6 |
120.6 |
119.8 |
C8 |
N1 |
H1 |
118.9 |
120.0 |
C8 |
C9 |
C10 |
118.1 |
120.0 |
C8 |
C9 |
C14 |
122.3 |
120.0 |
C9 |
C8 |
H3 |
108.8 |
109.5 |
C7 |
N1 |
H1 |
118.9 |
120.0 |
C5 |
C6 |
C1 |
120.8 |
120.1 |
C5 |
C6 |
H2 |
119.6 |
119.9 |
C2 |
C17 |
C18 |
121.6 |
120.9 |
C2 |
C1 |
H13 |
119.9 |
119.9 |
C21 |
C17 |
C18 |
117.9 |
118.1 |
C17 |
C18 |
C19 |
118.9 |
119.0 |
C17 |
C18 |
H23 |
120.6 |
120.5 |
C17 |
C21 |
C20 |
118.9 |
119.1 |
C17 |
C21 |
H10 |
120.5 |
120.5 |
C19 |
C18 |
H23 |
120.6 |
120.5 |
C18 |
C19 |
H24 |
117.9 |
119.6 |
C21 |
C20 |
H9 |
117.8 |
119.6 |
C1 |
C6 |
H2 |
119.6 |
120.0 |
C6 |
C1 |
H13 |
119.9 |
119.9 |
C9 |
C10 |
C11 |
120.3 |
119.9 |
C9 |
C10 |
H4 |
119.8 |
120.0 |
C9 |
C14 |
H20 |
119.8 |
119.9 |
C10 |
C11 |
O2 |
125.6 |
120.0 |
C10 |
C11 |
C12 |
119.7 |
119.9 |
C11 |
C10 |
H4 |
119.8 |
120.0 |
O2 |
C15 |
H6 |
109.5 |
109.5 |
O2 |
C15 |
H7 |
109.5 |
109.5 |
O2 |
C15 |
H8 |
109.5 |
109.5 |
C14 |
C13 |
H5 |
120.0 |
119.9 |
C13 |
C12 |
C11 |
120.0 |
120.0 |
C11 |
C12 |
H19 |
120.0 |
120.0 |
C12 |
C13 |
H5 |
119.9 |
120.0 |
C13 |
C12 |
H19 |
120.0 |
120.0 |
H6 |
C15 |
H7 |
109.5 |
109.5 |
H6 |
C15 |
H8 |
109.5 |
109.4 |
H7 |
C15 |
H8 |
109.5 |
109.5 |
H11 |
C22 |
H12 |
109.5 |
109.5 |
H16 |
N4 |
H17 |
109.5 |
111.0 |
H21 |
C16 |
H22 |
109.5 |
109.5 |
H25 |
C23 |
H26 |
109.4 |
109.5 |
H25 |
C23 |
H27 |
109.5 |
109.5 |
H26 |
C23 |
H27 |
109.5 |
109.5 |
Torsion Angles for J0G
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N4 |
C22 |
C16 |
N2 |
70.1 |
180.0 |
C16 |
C22 |
N4 |
H11 |
240.1 |
240.0 |
C16 |
C22 |
N4 |
H12 |
119.9 |
120.0 |
N4 |
C22 |
C16 |
H21 |
190.3 |
300.0 |
N4 |
C22 |
C16 |
H22 |
309.9 |
60.0 |
H11 |
C22 |
N4 |
H12 |
239.8 |
240.0 |
H16 |
N4 |
C22 |
H17 |
240.0 |
236.0 |
N4 |
C22 |
C16 |
H11 |
119.9 |
120.0 |
N4 |
C22 |
C16 |
H12 |
240.1 |
240.0 |
C16 |
C22 |
N4 |
H16 |
180.0 |
56.1 |
C16 |
C22 |
N4 |
H17 |
300.0 |
180.0 |
C22 |
C16 |
N2 |
H14 |
307.3 |
0.0 |
H11 |
C22 |
C16 |
H12 |
120.2 |
120.0 |
H21 |
C16 |
C22 |
H22 |
240.4 |
240.0 |
N2 |
C16 |
C22 |
H11 |
310.2 |
60.0 |
N2 |
C16 |
C22 |
H12 |
190.0 |
300.0 |
C22 |
C16 |
N2 |
H21 |
120.2 |
120.0 |
C22 |
C16 |
N2 |
H22 |
239.8 |
240.0 |
C5 |
C4 |
N2 |
C3 |
179.8 |
179.8 |
N2 |
C4 |
C3 |
C2 |
180.3 |
179.7 |
N2 |
C4 |
C3 |
H15 |
0.3 |
359.8 |
C23 |
C8 |
N1 |
H1 |
35.1 |
95.0 |
C9 |
C8 |
C23 |
H3 |
243.2 |
240.0 |
C3 |
C4 |
C5 |
C6 |
359.1 |
0.1 |
N2 |
C4 |
C5 |
C3 |
180.2 |
180.2 |
C5 |
C4 |
C3 |
C2 |
0.4 |
359.9 |
C5 |
C4 |
C3 |
H15 |
180.4 |
180.0 |
C4 |
C5 |
C6 |
C1 |
0.8 |
359.9 |
C4 |
C5 |
C6 |
H2 |
180.8 |
180.0 |
C4 |
C3 |
C2 |
H15 |
180.0 |
180.1 |
C3 |
C2 |
C17 |
C18 |
44.1 |
180.0 |
C3 |
C2 |
C1 |
H13 |
179.8 |
180.0 |
C7 |
N1 |
C8 |
H1 |
180.0 |
179.7 |
C23 |
C8 |
C9 |
H3 |
116.6 |
120.0 |
C9 |
C8 |
N1 |
H1 |
276.3 |
335.0 |
C8 |
C9 |
C10 |
C11 |
181.4 |
180.0 |
C8 |
C9 |
C10 |
H4 |
1.4 |
359.7 |
C8 |
C9 |
C14 |
H20 |
358.2 |
0.0 |
O1 |
C7 |
N1 |
H1 |
176.9 |
180.0 |
C8 |
N1 |
C7 |
H1 |
180.0 |
180.3 |
C7 |
C5 |
C4 |
C3 |
179.2 |
180.0 |
C5 |
C7 |
N1 |
H1 |
359.2 |
360.0 |
C7 |
C5 |
C6 |
C1 |
180.7 |
180.0 |
C7 |
C5 |
C6 |
H2 |
0.8 |
0.0 |
C6 |
C5 |
C4 |
C3 |
359.1 |
0.1 |
C1 |
C6 |
C5 |
H2 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
H13 |
179.7 |
180.0 |
C4 |
C3 |
C2 |
C17 |
179.7 |
180.0 |
C21 |
C17 |
C2 |
C18 |
179.7 |
180.1 |
C2 |
C17 |
C18 |
C19 |
179.4 |
180.1 |
C2 |
C17 |
C18 |
H23 |
359.4 |
0.0 |
C2 |
C17 |
C21 |
H10 |
0.7 |
359.9 |
C4 |
C3 |
C2 |
C1 |
0.1 |
0.1 |
C1 |
C2 |
C17 |
C18 |
223.7 |
359.9 |
C2 |
C1 |
C6 |
H2 |
179.8 |
180.0 |
C6 |
C1 |
C2 |
H13 |
180.0 |
179.9 |
C18 |
C17 |
C21 |
C20 |
0.4 |
0.1 |
C18 |
C17 |
C21 |
H10 |
180.4 |
180.0 |
C19 |
C18 |
C17 |
H23 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H24 |
179.9 |
180.1 |
C2 |
C17 |
C21 |
C18 |
180.3 |
179.9 |
C21 |
C17 |
C18 |
C19 |
359.7 |
360.0 |
C21 |
C17 |
C18 |
H23 |
179.7 |
179.9 |
C17 |
C21 |
C20 |
H9 |
179.9 |
180.0 |
C17 |
C18 |
C19 |
H23 |
180.0 |
180.0 |
C20 |
C21 |
C17 |
C18 |
0.4 |
0.1 |
C17 |
C21 |
C20 |
H10 |
180.0 |
179.9 |
C5 |
C6 |
C1 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
H13 |
180.0 |
180.1 |
C8 |
C9 |
C10 |
C14 |
181.9 |
180.0 |
C10 |
C9 |
C8 |
H3 |
316.0 |
340.0 |
C9 |
C10 |
C11 |
O2 |
178.7 |
179.8 |
C9 |
C10 |
C11 |
C12 |
1.0 |
359.7 |
C11 |
C10 |
C9 |
H4 |
180.0 |
180.3 |
C8 |
C9 |
C14 |
C10 |
178.0 |
180.0 |
C14 |
C9 |
C8 |
H3 |
138.0 |
160.0 |
C14 |
C9 |
C10 |
C11 |
359.5 |
0.0 |
C14 |
C9 |
C10 |
H4 |
179.4 |
179.8 |
C9 |
C14 |
C13 |
H5 |
179.6 |
179.7 |
C9 |
C10 |
C11 |
H4 |
180.0 |
179.7 |
C13 |
C12 |
C11 |
C10 |
358.9 |
360.0 |
C10 |
C11 |
C12 |
H19 |
178.8 |
180.5 |
C10 |
C11 |
O2 |
C15 |
12.2 |
180.0 |
H6 |
C15 |
O2 |
H7 |
240.0 |
239.9 |
H6 |
C15 |
O2 |
H8 |
120.0 |
120.0 |
H7 |
C15 |
O2 |
H8 |
240.0 |
240.0 |
C8 |
C9 |
C14 |
C13 |
178.2 |
180.5 |
C12 |
C13 |
C14 |
H5 |
180.0 |
179.4 |
C14 |
C13 |
C12 |
H19 |
180.9 |
180.0 |
C10 |
C11 |
O2 |
C12 |
182.2 |
179.9 |
O2 |
C11 |
C10 |
H4 |
358.7 |
0.1 |
C11 |
O2 |
C15 |
H6 |
180.0 |
180.0 |
C11 |
O2 |
C15 |
H7 |
300.0 |
300.0 |
C11 |
O2 |
C15 |
H8 |
60.0 |
60.0 |
C13 |
C12 |
C11 |
O2 |
180.9 |
179.9 |
C10 |
C11 |
C12 |
O2 |
177.9 |
180.1 |
C12 |
C11 |
C10 |
H4 |
181.0 |
180.0 |
C11 |
C12 |
C13 |
H5 |
180.9 |
180.0 |
C13 |
C12 |
C11 |
H19 |
180.0 |
179.4 |
C10 |
C11 |
C12 |
C13 |
358.9 |
360.0 |
C14 |
C13 |
C12 |
H5 |
180.0 |
180.6 |
C11 |
C12 |
C13 |
H19 |
180.0 |
180.6 |
C5 |
C6 |
H2 |
C1 |
180.0 |
180.0 |
H2 |
C6 |
C1 |
H13 |
359.7 |
360.0 |
H3 |
C8 |
N1 |
H1 |
154.0 |
215.0 |
H3 |
C8 |
C9 |
C10 |
316.0 |
340.0 |
H3 |
C8 |
C9 |
C14 |
138.0 |
160.0 |
C9 |
C10 |
H4 |
C11 |
180.0 |
180.3 |
H4 |
C10 |
C11 |
O2 |
358.7 |
0.1 |
H4 |
C10 |
C11 |
C12 |
181.0 |
180.0 |
H5 |
C13 |
C12 |
C11 |
180.9 |
180.0 |
H5 |
C13 |
C12 |
H19 |
0.9 |
359.4 |
O2 |
C15 |
H6 |
H7 |
120.0 |
120.0 |
O2 |
C15 |
H6 |
H8 |
240.0 |
240.0 |
H7 |
C15 |
H6 |
H8 |
120.0 |
120.0 |
O2 |
C15 |
H7 |
H6 |
240.0 |
239.9 |
O2 |
C15 |
H7 |
H8 |
120.0 |
120.0 |
H6 |
C15 |
H7 |
H8 |
240.0 |
240.0 |
O2 |
C15 |
H8 |
H6 |
120.0 |
120.0 |
O2 |
C15 |
H8 |
H7 |
240.0 |
240.0 |
H6 |
C15 |
H8 |
H7 |
120.0 |
120.0 |
H10 |
C21 |
C17 |
C18 |
180.4 |
180.0 |
C17 |
C21 |
H10 |
C20 |
180.0 |
180.1 |
H10 |
C21 |
C20 |
H9 |
359.9 |
0.1 |
N4 |
C22 |
H11 |
C16 |
240.7 |
240.0 |
N4 |
C22 |
H11 |
H12 |
120.3 |
120.0 |
H11 |
C22 |
N4 |
H16 |
299.9 |
176.0 |
H11 |
C22 |
N4 |
H17 |
59.9 |
300.0 |
H11 |
C22 |
C16 |
N2 |
310.2 |
60.0 |
C16 |
C22 |
H11 |
H12 |
239.7 |
240.0 |
H11 |
C22 |
C16 |
H21 |
70.4 |
180.0 |
H11 |
C22 |
C16 |
H22 |
190.0 |
300.0 |
N4 |
C22 |
H12 |
C16 |
119.3 |
120.0 |
N4 |
C22 |
H12 |
H11 |
239.7 |
240.0 |
H12 |
C22 |
N4 |
H16 |
60.1 |
296.0 |
H12 |
C22 |
N4 |
H17 |
180.1 |
60.0 |
H12 |
C22 |
C16 |
N2 |
190.0 |
300.0 |
C16 |
C22 |
H12 |
H11 |
120.3 |
119.9 |
H12 |
C22 |
C16 |
H21 |
310.2 |
60.0 |
H12 |
C22 |
C16 |
H22 |
69.8 |
180.0 |
H13 |
C1 |
C6 |
H2 |
359.7 |
360.0 |
H14 |
N2 |
C4 |
C3 |
238.6 |
174.4 |
C4 |
C3 |
H15 |
C2 |
180.0 |
179.9 |
H16 |
N4 |
C22 |
C16 |
180.0 |
56.1 |
H16 |
N4 |
C22 |
H11 |
299.9 |
176.0 |
H16 |
N4 |
C22 |
H12 |
60.1 |
296.0 |
C22 |
N4 |
H16 |
H17 |
120.0 |
124.0 |
H17 |
N4 |
C22 |
C16 |
300.0 |
180.0 |
H17 |
N4 |
C22 |
H11 |
59.9 |
300.0 |
H17 |
N4 |
C22 |
H12 |
180.1 |
60.0 |
C22 |
N4 |
H17 |
H16 |
240.0 |
236.0 |
C13 |
C12 |
H19 |
C11 |
180.0 |
180.6 |
H19 |
C12 |
C13 |
H5 |
0.9 |
359.4 |
H20 |
C14 |
C13 |
H5 |
359.6 |
0.3 |
C22 |
C16 |
H21 |
N2 |
238.9 |
240.0 |
H21 |
C16 |
C22 |
H11 |
70.4 |
180.0 |
H21 |
C16 |
C22 |
H12 |
310.2 |
60.0 |
C22 |
C16 |
H21 |
H22 |
119.4 |
120.0 |
H21 |
C16 |
N2 |
H14 |
187.1 |
240.1 |
C22 |
C16 |
H22 |
N2 |
121.2 |
120.0 |
H22 |
C16 |
C22 |
H11 |
190.0 |
300.0 |
H22 |
C16 |
C22 |
H12 |
69.8 |
180.0 |
C22 |
C16 |
H22 |
H21 |
240.6 |
240.1 |
H22 |
C16 |
N2 |
H14 |
67.5 |
120.0 |
C17 |
C18 |
H23 |
C19 |
180.0 |
180.0 |
H23 |
C18 |
C19 |
H24 |
359.9 |
0.1 |
H24 |
C19 |
C18 |
H23 |
359.9 |
0.1 |
H25 |
C23 |
C8 |
H3 |
60.6 |
180.0 |
H26 |
C23 |
H25 |
H27 |
120.0 |
120.1 |
H26 |
C23 |
C8 |
H3 |
180.6 |
300.0 |
H25 |
C23 |
H26 |
H27 |
240.0 |
239.9 |
H27 |
C23 |
C8 |
H3 |
300.6 |
60.0 |
H25 |
C23 |
H27 |
H26 |
120.0 |
120.1 |