PDB Chemical Component J01

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for J01

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O2	C5	1.219	1.210
C5	C4	1.491	1.540
C5	N1	1.405	1.366
C4	C3	1.532	1.539
C4	H4C1	1.115	1.092
C4	H4C2	1.115	1.093
C3	N1	1.481	1.465
C3	O1	1.430	1.449
C3	H3	1.115	1.096
N1	C2	1.473	1.439
O1	C1	1.447	1.408
C1	C2	1.487	1.511
C1	C6	1.341	1.337
C2	C8	1.495	1.494
C2	H2	1.115	1.093
C8	O5	1.257	1.222
C8	O4	1.257	1.355
O4	H4	0.950	0.981
C6	C7	1.501	1.493
C6	H6	1.103	1.087
C7	O3	1.421	1.420
C7	H7C1	1.115	1.094
C7	H7C2	1.115	1.095
O3	HA	0.950	0.971

Bond Angles for J01

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C5	C4	131.1	135.9
O2	C5	N1	130.9	132.6
C4	C5	N1	98.0	91.2
C5	C4	C3	81.9	85.6
C5	C4	H4C1	123.6	114.0
C5	C4	H4C2	123.6	113.9
C5	N1	C3	86.7	95.2
C5	N1	C2	114.2	124.7
C3	C4	H4C1	123.6	115.5
C3	C4	H4C2	123.6	115.5
C4	C3	N1	93.0	87.6
C4	C3	O1	111.6	119.4
C4	C3	H3	118.3	114.5
H4C1	C4	H4C2	85.7	110.4
N1	C3	O1	109.6	108.9
N1	C3	H3	120.1	112.4
C3	N1	C2	108.9	110.2
O1	C3	H3	104.0	111.5
C3	O1	C1	105.7	103.8
N1	C2	C1	103.2	100.7
N1	C2	C8	111.6	107.7
N1	C2	H2	112.5	111.7
O1	C1	C2	112.4	114.5
O1	C1	C6	126.2	120.7
C2	C1	C6	121.3	124.8
C1	C2	C8	110.4	110.3
C1	C2	H2	113.7	113.3
C1	C6	C7	125.5	123.9
C1	C6	H6	111.0	118.7
C8	C2	H2	105.6	112.5
C2	C8	O5	117.3	125.0
C2	C8	O4	118.0	110.7
O5	C8	O4	124.6	124.3
C8	O4	H4	118.0	111.9
C7	C6	H6	123.5	117.4
C6	C7	O3	113.7	108.8
C6	C7	H7C1	110.6	112.2
C6	C7	H7C2	110.7	109.8
O3	C7	H7C1	110.7	108.6
O3	C7	H7C2	110.6	108.6
C7	O3	HA	113.7	106.8
H7C1	C7	H7C2	99.7	108.8

Torsion Angles for J01

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	O2	N1	181.2	188.0
O2	C5	C4	C3	174.9	169.4
O2	C5	C4	H4C1	49.6	285.4
O2	C5	C4	H4C2	300.1	53.4
O2	C5	N1	C3	185.2	190.5
O2	C5	N1	C2	294.5	309.5
O2	C5	C4	N1	179.1	174.1
C4	C5	N1	C3	4.3	4.9
C4	C5	N1	C2	113.6	124.0
C3	C4	C5	H4C1	125.3	244.0
C3	C4	C5	H4C2	234.7	116.0
C5	C4	C3	N1	4.0	4.4
C5	C4	C3	O1	251.5	254.0
C5	C4	C3	H3	130.9	118.0
H4C1	C4	C5	H4C2	109.5	232.0
O2	C5	N1	C4	180.9	185.6
N1	C5	C4	C3	355.8	355.3
N1	C5	C4	H4C1	230.5	111.3
N1	C5	C4	H4C2	121.0	239.3
C4	C3	N1	C5	355.8	355.1
C5	N1	C3	O1	110.0	115.4
C5	N1	C3	H3	230.3	239.5
C3	N1	C5	C2	250.8	241.0
C5	N1	C2	C1	268.7	259.7
C5	N1	C2	C8	150.1	144.2
C5	N1	C2	H2	31.7	20.3
C3	C4	C5	N1	355.8	355.3
C5	C4	C3	H4C1	234.7	114.6
C5	C4	C3	H4C2	125.3	245.6
C5	N1	C3	C4	355.8	355.1
H4C1	C4	C3	H4C2	250.5	131.0
N1	C3	C4	O1	112.5	110.3
N1	C3	C4	H3	233.1	246.4
C4	C3	N1	C2	241.3	225.1
O1	C3	C4	H3	120.7	136.1
C4	C3	O1	C1	104.7	108.4
H4C1	C4	C5	N1	230.5	111.3
C5	C4	H4C1	C3	103.9	263.1
C5	C4	H4C1	H4C2	231.9	129.7
C3	C4	H4C1	H4C2	128.1	226.6
H4C1	C4	C3	N1	129.3	249.8
H4C1	C4	C3	O1	16.8	139.4
H4C1	C4	C3	H3	256.1	3.4
H4C2	C4	C5	N1	121.0	239.3
C5	C4	H4C2	C3	256.1	96.8
C5	C4	H4C2	H4C1	128.1	230.2
C3	C4	H4C2	H4C1	231.9	133.4
H4C2	C4	C3	N1	238.7	118.8
H4C2	C4	C3	O1	126.3	8.4
H4C2	C4	C3	H3	5.6	232.4
C5	N1	C3	C2	114.5	130.0
N1	C3	C4	H4C1	129.3	249.8
N1	C3	C4	H4C2	238.7	118.8
C4	C3	N1	O1	245.8	239.7
C4	C3	N1	H3	125.5	115.6
O1	C3	N1	H3	239.7	235.9
N1	C3	O1	C1	3.1	10.3
C3	N1	C2	C1	3.8	11.6
C3	N1	C2	C8	245.2	256.1
C3	N1	C2	H2	126.7	132.1
O1	C3	C4	H4C1	16.8	139.4
O1	C3	C4	H4C2	126.3	8.4
C4	C3	O1	N1	101.6	98.1
C4	C3	O1	H3	231.3	222.7
N1	C3	O1	H3	129.7	124.6
O1	C3	N1	C2	355.5	345.4
C3	O1	C1	C2	359.3	356.9
C3	O1	C1	C6	179.1	179.5
H3	C3	C4	H4C1	256.1	3.4
H3	C3	C4	H4C2	5.6	232.4
C4	C3	H3	N1	247.5	262.1
C4	C3	H3	O1	124.5	139.5
N1	C3	H3	O1	237.0	237.4
H3	C3	N1	C2	115.8	109.5
H3	C3	O1	C1	233.4	245.7
C5	N1	C2	C3	264.9	248.1
C2	N1	C3	O1	355.5	345.4
C2	N1	C3	H3	115.8	109.5
O1	C1	C2	N1	358.1	354.7
N1	C2	C1	C6	178.3	172.0
C1	C2	N1	C8	118.6	115.5
C1	C2	N1	H2	237.1	239.4
C8	C2	N1	H2	118.5	124.0
N1	C2	C8	O5	197.0	56.4
N1	C2	C8	O4	17.4	236.5
C1	O1	C3	H3	233.4	245.7
N1	C2	C1	O1	358.1	354.7
C2	C1	O1	C6	180.2	177.4
O1	C1	C2	C8	117.4	108.2
O1	C1	C2	H2	235.9	235.3
O1	C1	C6	C7	1.4	357.1
O1	C1	C6	H6	181.4	177.6
N1	C2	C1	C8	240.6	246.5
N1	C2	C1	H2	122.2	119.5
O1	C1	C2	C6	179.8	182.7
C2	C1	C6	C7	181.2	180.0
C2	C1	C6	H6	1.1	0.5
C8	C2	C1	H2	241.6	233.0
C1	C2	C8	O5	82.9	307.4
C1	C2	C8	O4	263.3	127.5
O1	C1	C6	C2	180.3	177.1
C6	C1	C2	C8	297.7	285.5
C6	C1	C2	H2	56.1	52.5
C7	C6	C1	H6	180.0	179.5
C1	C6	C7	O3	346.9	120.1
C1	C6	C7	H7C1	221.7	360.0
C1	C6	C7	H7C2	112.2	238.8
N1	C2	C8	C1	114.2	109.0
N1	C2	C8	H2	237.4	236.5
C8	C2	C1	C6	297.7	285.5
C1	C2	C8	H2	123.3	127.5
O5	C8	C2	O4	179.6	179.9
C2	C8	O4	H4	180.0	179.9
N1	C2	H2	C1	243.1	247.1
N1	C2	H2	C8	122.0	121.2
H2	C2	C1	C6	56.1	52.5
C1	C2	H2	C8	238.8	234.2
H2	C2	C8	O5	319.6	180.0
H2	C2	C8	O4	140.0	0.1
O5	C8	C2	H2	319.6	180.0
C2	C8	O5	O4	180.4	180.1
O5	C8	O4	H4	0.4	359.9
O4	C8	C2	H2	140.0	0.1
C2	C8	O4	O5	179.6	179.9
C1	C6	C7	H6	180.0	180.5
O3	C7	C6	H7C1	125.3	120.2
O3	C7	C6	H7C2	234.7	241.3
C6	C7	O3	HA	180.0	20.7
H7C1	C7	C6	H7C2	109.5	121.1
C1	C6	H6	C7	180.0	179.5
H6	C6	C7	O3	166.9	299.6
H6	C6	C7	H7C1	41.7	179.5
H6	C6	C7	H7C2	292.2	58.3
O3	C7	C6	H6	166.9	299.6
C6	C7	O3	H7C1	234.8	237.6
C6	C7	O3	H7C2	125.3	119.4
H7C1	C7	O3	H7C2	250.5	241.8
H7C1	C7	C6	H6	41.7	179.5
C6	C7	H7C1	O3	127.0	120.3
C6	C7	H7C1	H7C2	243.5	238.3
O3	C7	H7C1	H7C2	116.5	118.0
H7C1	C7	O3	HA	305.2	143.1
H7C2	C7	C6	H6	292.2	58.3
C6	C7	H7C2	O3	233.0	241.2
C6	C7	H7C2	H7C1	116.5	123.2
O3	C7	H7C2	H7C1	243.5	242.0
H7C2	C7	O3	HA	54.7	261.3
HA	O3	C7	H7C1	305.2	143.1
HA	O3	C7	H7C2	54.7	261.3