PDB Chemical Component IZP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IZP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
C1 |
1.265 |
1.208 |
C1 |
C6 |
1.552 |
1.507 |
C1 |
O1 |
1.260 |
1.342 |
O1 |
HO1 |
0.950 |
0.967 |
C11 |
C2 |
1.525 |
1.508 |
C2 |
C3 |
1.517 |
1.530 |
C2 |
H2 |
1.100 |
1.091 |
C2 |
H2A |
1.100 |
1.089 |
C3 |
C4 |
1.529 |
1.530 |
C3 |
C5 |
1.535 |
1.530 |
C3 |
H3 |
1.100 |
1.090 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H4A |
1.100 |
1.090 |
C4 |
H4B |
1.100 |
1.090 |
C5 |
H5 |
1.101 |
1.089 |
C5 |
H5A |
1.100 |
1.090 |
C5 |
H5B |
1.100 |
1.090 |
C7 |
C6 |
1.540 |
1.530 |
C6 |
C8 |
1.546 |
1.507 |
C6 |
H6 |
1.100 |
1.090 |
C7 |
H7 |
1.100 |
1.089 |
C7 |
H7A |
1.100 |
1.090 |
C7 |
H7B |
1.100 |
1.089 |
C8 |
C13 |
1.398 |
1.383 |
C8 |
C9 |
1.354 |
1.382 |
C9 |
C10 |
1.372 |
1.382 |
C9 |
H9 |
1.080 |
1.080 |
C10 |
C11 |
1.368 |
1.382 |
C10 |
H10 |
1.080 |
1.080 |
C12 |
C11 |
1.406 |
1.382 |
C13 |
C12 |
1.406 |
1.382 |
C12 |
H12 |
1.080 |
1.080 |
C13 |
H13 |
1.080 |
1.081 |
Bond Angles for IZP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
C6 |
117.6 |
120.0 |
O1 |
C1 |
C6 |
115.7 |
120.0 |
C1 |
C6 |
C8 |
108.9 |
109.5 |
C1 |
C6 |
H6 |
110.5 |
109.4 |
C1 |
O1 |
HO1 |
109.5 |
117.0 |
C11 |
C2 |
H2 |
108.6 |
109.4 |
C11 |
C2 |
H2A |
108.6 |
109.5 |
C3 |
C2 |
H2 |
108.6 |
109.5 |
C3 |
C2 |
H2A |
108.6 |
109.5 |
C2 |
C3 |
C4 |
108.5 |
109.5 |
C2 |
C3 |
C5 |
110.4 |
109.4 |
C2 |
C3 |
H3 |
111.0 |
109.5 |
H2 |
C2 |
H2A |
110.3 |
109.5 |
C4 |
C3 |
C5 |
113.7 |
109.5 |
C4 |
C3 |
H3 |
107.5 |
109.5 |
C3 |
C4 |
H4 |
109.5 |
109.5 |
C3 |
C4 |
H4A |
109.5 |
109.5 |
C3 |
C4 |
H4B |
109.5 |
109.5 |
C5 |
C3 |
H3 |
105.6 |
109.5 |
C3 |
C5 |
H5 |
109.5 |
109.5 |
C3 |
C5 |
H5A |
109.4 |
109.4 |
C3 |
C5 |
H5B |
109.5 |
109.5 |
H4 |
C4 |
H4A |
109.4 |
109.4 |
H4 |
C4 |
H4B |
109.5 |
109.4 |
H4A |
C4 |
H4B |
109.4 |
109.5 |
H5 |
C5 |
H5A |
109.4 |
109.5 |
H5 |
C5 |
H5B |
109.5 |
109.5 |
H5A |
C5 |
H5B |
109.5 |
109.5 |
C7 |
C6 |
C8 |
109.7 |
109.5 |
C7 |
C6 |
H6 |
109.7 |
109.5 |
C8 |
C6 |
H6 |
109.4 |
109.5 |
C6 |
C8 |
C13 |
120.7 |
120.0 |
C6 |
C8 |
C9 |
119.9 |
120.0 |
H7 |
C7 |
H7A |
109.5 |
109.5 |
H7 |
C7 |
H7B |
109.5 |
109.5 |
H7A |
C7 |
H7B |
109.5 |
109.5 |
C9 |
C8 |
C13 |
119.4 |
120.0 |
C8 |
C13 |
C12 |
119.4 |
120.0 |
C8 |
C13 |
H13 |
120.3 |
120.0 |
C8 |
C9 |
C10 |
121.8 |
120.0 |
C8 |
C9 |
H9 |
119.1 |
120.0 |
C10 |
C9 |
H9 |
119.1 |
120.0 |
C9 |
C10 |
C11 |
120.6 |
120.0 |
C9 |
C10 |
H10 |
119.7 |
120.0 |
C11 |
C10 |
H10 |
119.7 |
120.0 |
C13 |
C12 |
H12 |
120.3 |
120.0 |
Torsion Angles for IZP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
O2 |
C6 |
175.4 |
179.7 |
O2 |
C1 |
C6 |
C8 |
241.1 |
359.7 |
O2 |
C1 |
C6 |
H6 |
120.9 |
239.7 |
O2 |
C1 |
O1 |
HO1 |
360.0 |
0.3 |
C6 |
C1 |
O1 |
HO1 |
175.5 |
180.0 |
C7 |
C6 |
C1 |
C8 |
119.4 |
120.0 |
C7 |
C6 |
C1 |
H6 |
239.7 |
240.0 |
C8 |
C6 |
C1 |
H6 |
120.2 |
120.0 |
C1 |
C6 |
C8 |
C13 |
71.3 |
240.0 |
C1 |
C6 |
C8 |
C9 |
253.8 |
60.3 |
O2 |
C1 |
O1 |
C6 |
184.5 |
180.3 |
O1 |
C1 |
C6 |
C8 |
65.2 |
180.0 |
O1 |
C1 |
C6 |
H6 |
304.9 |
60.0 |
HO1 |
O1 |
C1 |
C6 |
175.5 |
180.0 |
C3 |
C2 |
C11 |
H2 |
240.0 |
120.0 |
C3 |
C2 |
C11 |
H2A |
120.0 |
240.0 |
C11 |
C2 |
C3 |
H3 |
36.5 |
305.0 |
H2 |
C2 |
C11 |
H2A |
240.0 |
120.0 |
C11 |
C2 |
C3 |
H2 |
120.0 |
240.1 |
C11 |
C2 |
C3 |
H2A |
240.0 |
120.1 |
H2 |
C2 |
C3 |
H2A |
120.0 |
240.0 |
C4 |
C3 |
C2 |
C5 |
125.3 |
240.0 |
C4 |
C3 |
C2 |
H3 |
242.0 |
120.1 |
C2 |
C3 |
C4 |
H4 |
180.0 |
300.0 |
C2 |
C3 |
C4 |
H4A |
300.0 |
60.0 |
C2 |
C3 |
C4 |
H4B |
60.0 |
180.0 |
C5 |
C3 |
C2 |
H3 |
116.7 |
240.0 |
C2 |
C3 |
C5 |
H5 |
180.0 |
60.0 |
C2 |
C3 |
C5 |
H5A |
300.0 |
180.0 |
C2 |
C3 |
C5 |
H5B |
60.0 |
300.0 |
C11 |
C2 |
H2 |
H2A |
118.9 |
240.0 |
C3 |
C2 |
H2 |
H2A |
241.1 |
120.0 |
H2 |
C2 |
C3 |
C4 |
158.5 |
185.0 |
H2 |
C2 |
C3 |
C5 |
33.2 |
305.0 |
H2 |
C2 |
C3 |
H3 |
276.5 |
64.9 |
C11 |
C2 |
H2A |
H2 |
241.1 |
120.0 |
C3 |
C2 |
H2A |
H2 |
118.8 |
240.0 |
H2A |
C2 |
C3 |
C4 |
38.5 |
305.0 |
H2A |
C2 |
C3 |
C5 |
273.2 |
65.0 |
H2A |
C2 |
C3 |
H3 |
156.5 |
184.9 |
C4 |
C3 |
C2 |
H2 |
158.5 |
185.0 |
C4 |
C3 |
C2 |
H2A |
38.5 |
305.0 |
C2 |
C3 |
C4 |
C5 |
236.7 |
120.0 |
C2 |
C3 |
C4 |
H3 |
120.2 |
240.0 |
C5 |
C3 |
C4 |
H3 |
243.5 |
120.0 |
C4 |
C3 |
C5 |
H5 |
57.7 |
180.0 |
C4 |
C3 |
C5 |
H5A |
177.7 |
300.0 |
C4 |
C3 |
C5 |
H5B |
297.7 |
60.0 |
H4 |
C4 |
C3 |
H4A |
240.0 |
240.0 |
H4 |
C4 |
C3 |
H4B |
120.0 |
120.0 |
H4A |
C4 |
C3 |
H4B |
240.0 |
240.0 |
C5 |
C3 |
C2 |
H2 |
33.2 |
305.0 |
C5 |
C3 |
C2 |
H2A |
273.2 |
65.0 |
C2 |
C3 |
C5 |
C4 |
122.3 |
240.0 |
C2 |
C3 |
C5 |
H3 |
239.9 |
120.0 |
C4 |
C3 |
C5 |
H3 |
117.6 |
240.0 |
C5 |
C3 |
C4 |
H4 |
303.4 |
180.0 |
C5 |
C3 |
C4 |
H4A |
63.4 |
300.0 |
C5 |
C3 |
C4 |
H4B |
183.3 |
60.0 |
H5 |
C5 |
C3 |
H5A |
240.0 |
240.0 |
H5 |
C5 |
C3 |
H5B |
120.0 |
120.0 |
H5A |
C5 |
C3 |
H5B |
240.0 |
240.0 |
H3 |
C3 |
C2 |
H2 |
276.5 |
64.9 |
H3 |
C3 |
C2 |
H2A |
156.5 |
184.9 |
C2 |
C3 |
H3 |
C4 |
241.4 |
120.0 |
C2 |
C3 |
H3 |
C5 |
119.7 |
240.1 |
C4 |
C3 |
H3 |
C5 |
238.3 |
120.0 |
H3 |
C3 |
C4 |
H4 |
59.8 |
60.0 |
H3 |
C3 |
C4 |
H4A |
179.8 |
180.0 |
H3 |
C3 |
C4 |
H4B |
299.8 |
300.0 |
H3 |
C3 |
C5 |
H5 |
300.1 |
300.0 |
H3 |
C3 |
C5 |
H5A |
60.0 |
60.0 |
H3 |
C3 |
C5 |
H5B |
180.0 |
180.0 |
H4 |
C4 |
C3 |
C5 |
303.4 |
180.0 |
H4 |
C4 |
C3 |
H3 |
59.8 |
60.0 |
C3 |
C4 |
H4 |
H4A |
120.0 |
120.0 |
C3 |
C4 |
H4 |
H4B |
240.0 |
240.0 |
H4A |
C4 |
H4 |
H4B |
120.0 |
120.0 |
H4A |
C4 |
C3 |
C5 |
63.4 |
300.0 |
H4A |
C4 |
C3 |
H3 |
179.8 |
180.0 |
C3 |
C4 |
H4A |
H4 |
240.0 |
240.0 |
C3 |
C4 |
H4A |
H4B |
120.0 |
120.0 |
H4 |
C4 |
H4A |
H4B |
240.0 |
240.1 |
H4B |
C4 |
C3 |
C5 |
183.3 |
60.0 |
H4B |
C4 |
C3 |
H3 |
299.8 |
300.0 |
C3 |
C4 |
H4B |
H4 |
120.1 |
120.0 |
C3 |
C4 |
H4B |
H4A |
240.0 |
239.9 |
H4 |
C4 |
H4B |
H4A |
119.9 |
119.9 |
H5 |
C5 |
C3 |
H3 |
300.1 |
300.0 |
C3 |
C5 |
H5 |
H5A |
120.0 |
120.0 |
C3 |
C5 |
H5 |
H5B |
240.0 |
240.0 |
H5A |
C5 |
H5 |
H5B |
120.0 |
120.0 |
H5A |
C5 |
C3 |
H3 |
60.0 |
60.0 |
C3 |
C5 |
H5A |
H5 |
240.0 |
240.0 |
C3 |
C5 |
H5A |
H5B |
120.0 |
120.0 |
H5 |
C5 |
H5A |
H5B |
240.0 |
240.0 |
H5B |
C5 |
C3 |
H3 |
180.0 |
180.0 |
C3 |
C5 |
H5B |
H5 |
120.1 |
120.0 |
C3 |
C5 |
H5B |
H5A |
240.0 |
240.1 |
H5 |
C5 |
H5B |
H5A |
120.0 |
120.0 |
C1 |
C6 |
C7 |
C8 |
241.1 |
240.0 |
C1 |
C6 |
C7 |
H6 |
120.9 |
120.0 |
C8 |
C6 |
C7 |
H6 |
239.8 |
239.9 |
C7 |
C6 |
C8 |
C13 |
312.6 |
120.0 |
C7 |
C6 |
C8 |
C9 |
135.1 |
300.3 |
C1 |
C6 |
C8 |
H6 |
239.1 |
240.0 |
C7 |
C6 |
C8 |
H6 |
120.4 |
120.1 |
C9 |
C8 |
C6 |
C13 |
182.5 |
180.3 |
C6 |
C8 |
C13 |
C12 |
180.2 |
179.8 |
C6 |
C8 |
C13 |
H13 |
0.2 |
0.0 |
C6 |
C8 |
C9 |
C10 |
179.2 |
180.0 |
C6 |
C8 |
C9 |
H9 |
359.2 |
360.0 |
C1 |
C6 |
H6 |
C8 |
119.9 |
120.0 |
C7 |
C6 |
H6 |
C8 |
239.6 |
239.9 |
H6 |
C6 |
C8 |
C13 |
192.2 |
360.0 |
H6 |
C6 |
C8 |
C9 |
14.7 |
180.3 |
H7 |
C7 |
C6 |
C8 |
298.9 |
180.0 |
H7 |
C7 |
C6 |
H6 |
59.1 |
300.1 |
H7A |
C7 |
H7 |
H7B |
120.0 |
120.0 |
H7A |
C7 |
C6 |
C8 |
58.9 |
299.9 |
H7A |
C7 |
C6 |
H6 |
179.2 |
60.0 |
H7 |
C7 |
H7A |
H7B |
240.0 |
240.0 |
H7B |
C7 |
C6 |
C8 |
178.9 |
59.9 |
H7B |
C7 |
C6 |
H6 |
299.1 |
180.0 |
H7 |
C7 |
H7B |
H7A |
120.0 |
120.0 |
C13 |
C8 |
C6 |
H6 |
192.2 |
360.0 |
C6 |
C8 |
C13 |
C9 |
182.5 |
180.3 |
C13 |
C8 |
C9 |
C10 |
1.7 |
0.3 |
C13 |
C8 |
C9 |
H9 |
181.7 |
180.3 |
C8 |
C13 |
C12 |
H12 |
181.9 |
180.3 |
C9 |
C8 |
C6 |
H6 |
14.7 |
180.3 |
C6 |
C8 |
C9 |
C13 |
177.5 |
179.7 |
C9 |
C8 |
C13 |
C12 |
357.7 |
359.5 |
C9 |
C8 |
C13 |
H13 |
177.7 |
179.7 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
C11 |
359.2 |
360.0 |
C8 |
C9 |
C10 |
H10 |
179.2 |
179.9 |
C10 |
C9 |
C8 |
C13 |
1.7 |
0.3 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
C13 |
181.7 |
180.3 |
C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
H9 |
C9 |
C10 |
C11 |
179.2 |
180.0 |
H9 |
C9 |
C10 |
H10 |
359.2 |
359.9 |
C10 |
C11 |
C2 |
H2 |
231.9 |
330.0 |
C10 |
C11 |
C2 |
H2A |
351.8 |
210.0 |
C11 |
C10 |
C9 |
H9 |
179.2 |
180.0 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
H10 |
C10 |
C9 |
H9 |
359.2 |
359.9 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
C12 |
C11 |
C2 |
H2 |
51.7 |
150.0 |
C12 |
C11 |
C2 |
H2A |
171.7 |
30.0 |
C8 |
C13 |
C12 |
C11 |
2.0 |
0.5 |
C12 |
C11 |
C10 |
H10 |
180.4 |
180.1 |
C8 |
C13 |
C12 |
H13 |
180.0 |
180.2 |
C8 |
C13 |
H13 |
C12 |
180.0 |
179.8 |
H13 |
C13 |
C12 |
H12 |
1.9 |
0.0 |