PDB Chemical Component IYR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IYR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N	CA	1.473	1.469
N	H	1.021	1.008
N	H2	1.020	1.009
CA	CB	1.520	1.529
CA	C	1.504	1.507
CA	HA	1.115	1.090
CB	CC	1.419	1.507
CB	HB2	1.114	1.090
CB	HB3	1.115	1.089
CC	CD	1.332	1.381
CC	CH	1.376	1.384
CD	CE	1.322	1.381
CD	HD	1.102	1.080
CE	IE	1.984	2.095
CE	CF	1.360	1.387
CF	OF	1.428	1.360
CF	CG	1.372	1.387
OF	HF	0.950	0.966
CG	CH	1.393	1.380
CG	HG	1.104	1.081
CH	HH	1.103	1.080
C	O	1.238	1.209
C	OXT	1.235	1.342
OXT	HXT	0.950	0.968

Bond Angles for IYR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CA	N	H	113.4	106.7
CA	N	H2	110.7	106.7
N	CA	CB	113.4	109.5
N	CA	C	110.3	109.5
N	CA	HA	105.3	109.4
H	N	H2	110.8	106.7
CB	CA	C	106.7	109.5
CB	CA	HA	109.1	109.5
CA	CB	CC	98.7	109.5
CA	CB	HB2	116.4	109.4
CA	CB	HB3	116.3	109.5
C	CA	HA	112.2	109.5
CA	C	O	120.3	120.0
CA	C	OXT	119.2	120.0
CC	CB	HB2	116.4	109.5
CC	CB	HB3	116.3	109.5
CB	CC	CD	117.7	120.0
CB	CC	CH	122.1	119.9
HB2	CB	HB3	94.1	109.5
CD	CC	CH	120.2	120.1
CC	CD	CE	120.6	120.1
CC	CD	HD	120.1	119.9
CC	CH	CG	119.2	120.0
CC	CH	HH	119.8	119.9
CE	CD	HD	119.3	120.0
CD	CE	IE	116.1	120.0
CD	CE	CF	122.6	119.9
IE	CE	CF	121.3	120.0
CE	CF	OF	120.2	120.1
CE	CF	CG	118.4	119.9
OF	CF	CG	121.4	120.0
CF	OF	HF	120.2	106.8
CF	CG	CH	119.1	119.9
CF	CG	HG	119.7	120.1
CH	CG	HG	121.2	120.0
CG	CH	HH	121.0	120.0
O	C	OXT	120.5	120.0
C	OXT	HXT	119.2	120.0

Torsion Angles for IYR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H	N	CA	H2	125.2	113.8
CB	CA	N	C	240.5	240.0
CB	CA	N	HA	119.2	120.0
N	CA	CB	CC	237.7	300.0
N	CA	CB	HB2	3.0	60.0
N	CA	CB	HB3	112.5	180.0
C	CA	N	HA	238.7	240.0
N	CA	C	O	93.4	330.1
N	CA	C	OXT	272.7	149.9
CA	N	H	H2	234.8	246.2
H	N	CA	CB	180.0	53.7
H	N	CA	C	299.5	173.7
H	N	CA	HA	60.8	293.7
CA	N	H2	H	126.7	113.8
H2	N	CA	CB	54.8	299.9
H2	N	CA	C	174.3	60.0
H2	N	CA	HA	295.6	179.9
CB	CA	N	H	180.0	53.7
CB	CA	N	H2	54.8	299.9
N	CA	CB	C	121.6	120.0
N	CA	CB	HA	243.0	240.0
C	CA	CB	HA	121.4	120.0
CB	CA	C	O	216.9	90.1
CB	CA	C	OXT	36.2	270.0
CC	CB	CA	HB2	234.7	240.0
CC	CB	CA	HB3	125.2	120.1
CA	CB	CC	CD	56.0	269.7
CA	CB	CC	CH	235.2	90.0
HB2	CB	CA	HB3	250.5	240.0
C	CA	N	H	299.5	173.7
C	CA	N	H2	174.3	60.0
N	CA	C	CB	236.5	239.9
N	CA	C	HA	117.1	120.0
CB	CA	C	HA	240.6	240.0
C	CA	CB	CC	116.1	180.0
C	CA	CB	HB2	241.4	300.0
C	CA	CB	HB3	350.9	59.9
O	C	CA	OXT	180.7	180.2
CA	C	OXT	HXT	180.1	180.0
HA	CA	N	H	60.8	293.7
HA	CA	N	H2	295.6	179.9
N	CA	HA	CB	122.1	120.0
N	CA	HA	C	240.0	240.0
CB	CA	HA	C	118.0	120.0
HA	CA	CB	CC	354.7	60.0
HA	CA	CB	HB2	120.0	180.0
HA	CA	CB	HB3	229.5	300.0
HA	CA	C	O	336.3	210.1
HA	CA	C	OXT	155.6	29.9
CC	CB	CA	C	116.1	180.0
CC	CB	CA	HA	354.7	60.0
CA	CB	CC	HB2	125.3	119.9
CA	CB	CC	HB3	234.8	240.0
HB2	CB	CC	HB3	109.5	120.0
CD	CC	CB	CH	180.8	179.7
CB	CC	CD	CE	180.2	179.8
CB	CC	CD	HD	0.2	0.2
CB	CC	CH	CG	179.8	180.0
CB	CC	CH	HH	359.8	360.0
HB2	CB	CA	C	241.4	300.0
HB2	CB	CA	HA	120.0	180.0
CA	CB	HB2	CC	244.2	240.0
CA	CB	HB2	HB3	122.1	120.0
CC	CB	HB2	HB3	237.9	239.9
HB2	CB	CC	CD	290.7	149.8
HB2	CB	CC	CH	109.9	330.0
HB3	CB	CA	C	350.9	59.9
HB3	CB	CA	HA	229.5	300.0
CA	CB	HB3	CC	115.7	120.0
CA	CB	HB3	HB2	237.9	240.1
CC	CB	HB3	HB2	122.1	120.1
HB3	CB	CC	CD	181.2	29.7
HB3	CB	CC	CH	0.4	210.0
CD	CC	CB	HB2	290.7	149.8
CD	CC	CB	HB3	181.2	29.7
CB	CC	CD	CH	179.3	180.3
CD	CC	CH	CG	359.0	0.2
CD	CC	CH	HH	179.1	180.2
CE	CD	CC	HD	180.0	179.5
CC	CD	CE	IE	180.6	180.2
CC	CD	CE	CF	359.3	0.5
CH	CC	CB	HB2	109.9	330.0
CH	CC	CB	HB3	0.4	210.0
CB	CC	CH	CD	180.8	179.7
CH	CC	CD	CE	0.9	359.5
CH	CC	CD	HD	180.9	180.0
CF	CG	CH	CC	0.8	360.0
CC	CH	CG	HG	180.8	179.9
CG	CH	CC	HH	180.0	180.0
CE	CD	CC	CH	0.9	359.5
CC	CD	CE	HD	180.0	180.5
IE	CE	CD	CF	181.4	179.7
CD	CE	CF	OF	179.7	179.8
CD	CE	CF	CG	0.6	359.7
HD	CD	CC	CH	180.9	180.0
CC	CD	HD	CE	180.0	179.5
HD	CD	CE	IE	0.6	359.7
HD	CD	CE	CF	179.3	180.1
IE	CE	CD	HD	0.6	359.7
CD	CE	IE	CF	178.7	180.3
IE	CE	CF	OF	358.3	0.1
IE	CE	CF	CG	179.1	180.0
CF	CE	CD	HD	179.3	180.1
CD	CE	CF	IE	181.4	179.7
OF	CF	CE	CG	179.2	180.1
CE	CF	OF	HF	180.1	270.0
CE	CF	CG	CH	359.4	0.1
CE	CF	CG	HG	179.4	180.1
CE	CF	OF	CG	180.9	179.9
OF	CF	CG	CH	180.3	180.0
OF	CF	CG	HG	0.2	360.0
CC	CH	CG	CF	0.8	360.0
CE	CF	CG	OF	179.2	180.1
CG	CF	OF	HF	359.2	90.1
CH	CG	CF	HG	180.0	180.0
CF	CG	CH	HH	180.8	180.0
HF	OF	CF	CG	359.2	90.1
CC	CH	CG	HH	180.0	180.0
CF	CG	CH	HG	180.0	180.0
CF	CG	HG	CH	180.0	180.0
HG	CG	CH	HH	0.8	359.9
CC	CH	HH	CG	180.0	180.0
HH	CH	CG	HG	0.8	359.9
O	C	CA	HA	336.3	210.1
CA	C	O	OXT	179.3	179.8
O	C	OXT	HXT	359.3	359.8
OXT	C	CA	HA	155.6	29.9
CA	C	OXT	O	180.7	180.2