PDB Chemical Component IXS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IXS

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C29 N24 1.463 1.465
C53 C51 1.526 1.530
C64 C65 1.400 1.382
C64 C63 1.394 1.382
C22 S1 1.676 1.815
O4 C34 1.220 1.216
N24 C19 1.423 1.397
N24 S1 1.548 1.656
O3 C1 1.227 1.212
C65 C58 1.402 1.382
C63 C62 1.393 1.383
C10 C51 1.531 1.530
C10 N9 1.464 1.466
C19 C18 1.407 1.388
C19 C20 1.405 1.387
C18 C17 1.395 1.396
C51 C52 1.526 1.530
S1 O1 1.429 1.421
S1 O2 1.422 1.421
C20 C15 1.398 1.395
C17 C34 1.502 1.478
C17 C16 1.397 1.393
C34 N35 1.326 1.348
O5 C14 1.234 1.216
C1 N9 1.337 1.348
C1 C39 1.508 1.507
C16 C15 1.400 1.394
C15 C14 1.504 1.479
C58 C61 1.392 1.383
C58 C56 1.527 1.506
C62 C61 1.407 1.382
C14 N13 1.335 1.348
C36 N35 1.449 1.466
C36 C56 1.526 1.530
C36 C37 1.524 1.531
C8 C39 1.523 1.530
C39 N38 1.463 1.469
N38 C37 1.457 1.469
N13 C12 1.460 1.464
C12 C50 1.531 1.530
C12 C5 1.486 1.507
C5 C4 1.401 1.382
C5 C6 1.399 1.382
C4 C3 1.394 1.382
C6 C7 1.396 1.382
C3 C2 1.390 1.385
C7 C2 1.398 1.384
C2 F1 1.342 1.351
C22 H221 1.100 1.090
C22 H222 1.100 1.089
C22 H223 1.100 1.090
C29 H291 1.100 1.091
C29 H292 1.100 1.090
C29 H293 1.100 1.090
C20 H20 1.080 1.080
N13 HN13 1.000 0.970
C12 H12 1.100 1.091
C50 H501 1.100 1.090
C50 H502 1.100 1.090
C50 H503 1.100 1.090
C6 H6 1.080 1.080
C7 H7 1.079 1.080
C4 H4 1.080 1.080
C3 H3 1.080 1.080
C18 H18 1.080 1.079
C16 H16 1.080 1.080
N35 HN35 1.000 0.970
C36 H36 1.100 1.090
C56 H561 1.100 1.091
C56 H562 1.100 1.090
C65 H65 1.080 1.080
C64 H64 1.080 1.080
C63 H63 1.080 1.080
C62 H62 1.080 1.080
C61 H61 1.080 1.080
C37 H371 1.100 1.090
C37 H372 1.100 1.090
N38 HN38 1.000 1.009
C39 H39 1.100 1.091
C8 H81 1.100 1.090
C8 H82 1.100 1.090
C8 H83 1.101 1.091
N9 HN9 1.000 0.970
C10 H101 1.100 1.090
C10 H102 1.100 1.090
C51 H51 1.100 1.090
C52 H521 1.100 1.090
C52 H522 1.100 1.091
C52 H523 1.100 1.090
C53 H531 1.099 1.090
C53 H532 1.100 1.090
C53 H533 1.100 1.090

Bond Angles for IXS

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C29 N24 C19 118.0 120.0
C53 C51 H51 109.2 109.5
C64 C65 H65 119.7 120.0
C64 C63 C62 119.6 120.0
C63 C64 H64 119.8 120.0
C64 C63 H63 120.2 120.0
O4 C34 N35 122.6 120.0
N24 C19 C18 119.4 119.9
N24 C19 C20 121.7 120.0
O3 C1 N9 122.0 120.0
C65 C58 C61 118.6 120.0
C63 C62 C61 119.8 120.0
C62 C63 H63 120.2 120.0
C63 C62 H62 120.1 120.0
C10 C51 C52 112.7 109.5
C51 C10 H101 107.8 109.5
C51 C10 H102 106.7 109.5
C10 C51 H51 106.3 109.5
C10 N9 HN9 119.9 120.0
C20 C19 C18 118.9 120.1
C19 C18 C17 120.3 120.0
C19 C18 H18 119.9 120.0
C19 C20 C15 121.2 120.1
C19 C20 H20 119.4 119.9
C18 C17 C34 120.9 120.0
C18 C17 C16 120.0 119.9
C17 C18 H18 119.9 120.0
C52 C51 H51 107.5 109.5
C51 C52 H521 109.5 109.5
C51 C52 H522 109.5 109.4
C51 C52 H523 109.5 109.5
C20 C15 C14 122.2 120.1
C15 C20 H20 119.4 119.9
C16 C17 C34 119.1 120.0
C17 C34 N35 116.5 120.0
C17 C16 H16 119.7 120.1
C34 N35 HN35 118.5 120.0
O5 C14 N13 122.6 120.0
C1 N9 HN9 119.9 120.0
C1 C39 H39 107.8 109.5
C15 C14 N13 115.7 120.0
C58 C61 C62 121.1 120.0
C58 C61 H61 119.5 120.0
C58 C56 H561 107.9 109.5
C58 C56 H562 106.8 109.5
C61 C62 H62 120.1 120.1
C62 C61 H61 119.5 120.0
C14 N13 C12 124.4 120.0
C14 N13 HN13 117.8 119.9
C36 N35 HN35 118.5 120.0
C56 C36 C37 108.9 109.5
C56 C36 H36 108.5 109.5
C36 C56 H561 107.9 109.5
C36 C56 H562 106.8 109.5
C37 C36 H36 111.3 109.5
C36 C37 H371 109.3 109.5
C36 C37 H372 109.2 109.4
C8 C39 H39 109.7 109.5
C39 N38 HN38 106.6 111.0
N38 C37 H371 109.3 109.5
N38 C37 H372 109.1 109.5
N13 C12 C50 110.1 109.5
N13 C12 C5 111.9 109.5
C12 N13 HN13 117.8 120.1
N13 C12 H12 108.3 109.5
C50 C12 C5 112.0 109.5
C50 C12 H12 108.1 109.5
C12 C50 H501 109.5 109.5
C12 C50 H502 109.5 109.5
C12 C50 H503 109.5 109.5
C12 C5 C4 118.7 120.0
C12 C5 C6 121.9 120.0
C5 C12 H12 106.2 109.4
C6 C5 C4 119.4 120.0
C5 C4 C3 120.6 120.1
C5 C4 H4 119.7 120.0
C5 C6 C7 120.1 120.1
C5 C6 H6 119.9 120.0
C4 C3 C2 119.6 119.9
C3 C4 H4 119.7 119.9
C4 C3 H3 120.2 120.1
C6 C7 C2 119.8 120.0
C7 C6 H6 120.0 120.0
C6 C7 H7 120.1 120.0
C7 C2 C3 120.5 120.0
C3 C2 F1 119.7 120.0
C2 C3 H3 120.2 120.0
C7 C2 F1 119.8 120.0
C2 C7 H7 120.1 120.0
H221 C22 H222 109.5 109.4
H221 C22 H223 109.4 109.5
H222 C22 H223 109.5 109.6
H291 C29 H292 109.4 109.4
H291 C29 H293 109.4 109.4
H292 C29 H293 109.5 109.5
H501 C50 H502 109.4 109.5
H501 C50 H503 109.4 109.4
H502 C50 H503 109.5 109.4
H561 C56 H562 113.4 109.5
H371 C37 H372 109.9 109.5
H81 C8 H82 109.5 109.5
H81 C8 H83 109.5 109.5
H82 C8 H83 109.5 109.5
H101 C10 H102 113.5 109.5
H521 C52 H522 109.5 109.5
H521 C52 H523 109.5 109.5
H522 C52 H523 109.5 109.4
H531 C53 H532 109.5 109.4
H531 C53 H533 109.4 109.4
H532 C53 H533 109.5 109.4

Torsion Angles for IXS

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C29 N24 C19 C18 322.6 335.0
C29 N24 C19 C20 142.6 155.2
C53 C51 C10 H101 300.9 65.0
C53 C51 C10 H102 63.2 305.0
C10 C51 C53 H51 116.9 120.0
C52 C51 C53 H51 242.3 240.0
C53 C51 C52 H521 351.4 60.0
C53 C51 C52 H522 111.4 180.0
C53 C51 C52 H523 231.4 300.0
C64 C65 C58 C61 359.9 360.0
C63 C64 C65 H65 180.1 180.0
C64 C63 C62 C61 0.2 0.1
C62 C63 C64 H63 180.0 180.1
C64 C63 C62 H62 180.2 180.0
C17 C34 O4 N35 180.5 180.0
O4 C34 N35 HN35 196.3 180.0
C20 C19 N24 C18 180.0 180.2
N24 C19 C18 C17 180.1 180.0
N24 C19 C18 H18 0.1 359.9
N24 C19 C20 C15 179.9 180.0
N24 C19 C20 H20 359.9 360.0
O3 C1 N9 HN9 171.2 179.9
O3 C1 C39 H39 195.4 240.1
C65 C58 C61 C62 0.2 0.0
C65 C58 C61 H61 180.2 179.7
C65 C58 C56 H561 82.6 150.3
C65 C58 C56 H562 204.8 30.3
C62 C63 C64 H64 179.9 180.1
C64 C63 C62 H63 180.0 179.9
C58 C61 C62 C63 359.8 359.9
C61 C62 C63 H62 180.0 180.1
C63 C62 C61 H61 179.8 180.3
C53 C51 C10 H51 241.3 240.0
C51 C10 N9 HN9 347.1 0.1
C52 C51 C10 H51 117.5 120.0
C10 C51 C52 H521 115.8 180.0
C10 C51 C52 H522 235.8 300.0
C10 C51 C52 H523 355.8 60.0
H101 C10 C51 H102 237.8 120.1
C1 N9 C10 HN9 180.0 179.9
N24 C19 C18 C20 180.0 180.2
C18 C19 C20 C15 360.0 0.2
C18 C19 C20 H20 180.0 180.2
C19 C18 C17 C34 179.5 179.9
C19 C18 C17 C16 359.7 360.0
C17 C18 C19 H18 180.0 180.1
N24 C19 C20 C18 180.0 179.8
C20 C19 C18 C17 0.1 359.8
C20 C19 C18 H18 180.1 179.7
C19 C20 C15 C14 181.1 180.0
C15 C20 C19 H20 180.0 180.0
C19 C18 C17 H18 180.0 179.9
C16 C17 C18 C34 180.2 180.0
C18 C17 C34 N35 218.3 180.0
C18 C17 C16 H16 180.5 180.1
C53 C51 C52 H51 118.8 120.0
C52 C51 C10 H101 177.1 305.1
C52 C51 C10 H102 299.4 185.0
C10 C51 C52 H51 243.2 240.0
H521 C52 C51 H522 240.0 240.0
H521 C52 C51 H523 120.0 120.0
H522 C52 C51 H523 240.0 240.0
C15 C20 C19 C18 360.0 0.2
C19 C20 C15 H20 180.0 180.0
C20 C15 C14 N13 139.5 180.0
O4 C34 C17 N35 179.5 180.0
C18 C17 C34 C16 180.2 180.0
C34 C17 C18 H18 359.5 0.1
C34 C17 C16 H16 0.7 0.1
C17 C34 N35 HN35 15.8 0.0
C18 C17 C16 C34 179.8 180.0
C16 C17 C18 H18 179.7 180.1
C16 C17 C34 N35 38.1 360.0
C36 N35 C34 HN35 180.0 180.0
C15 C14 O5 N13 179.5 180.1
O5 C14 N13 C12 4.5 0.1
O5 C14 N13 HN13 184.5 180.0
C10 N9 C1 HN9 180.0 180.1
N9 C1 C39 H39 15.4 60.0
C8 C39 C1 H39 240.5 240.0
C1 C39 N38 HN38 50.4 329.0
C16 C15 C20 H20 180.3 180.1
C14 C15 C20 H20 1.1 0.1
O5 C14 C15 N13 180.5 179.9
C15 C14 N13 C12 185.0 180.0
C15 C14 N13 HN13 5.0 359.9
C63 C62 C61 C58 359.8 359.9
C61 C58 C56 H561 262.9 330.0
C61 C58 C56 H562 25.0 210.0
C58 C61 C62 H62 179.8 180.0
C62 C61 C58 H61 180.0 180.3
C58 C56 C36 C37 191.4 175.0
C58 C56 C36 H36 70.0 55.0
C36 C56 C58 H561 240.0 120.0
C36 C56 C58 H562 117.8 240.0
H561 C56 C58 H562 237.8 120.0
C61 C62 C63 H63 180.2 180.1
C63 C62 C61 H62 180.0 179.9
C58 C61 C62 H61 180.0 179.7
C14 N13 C12 C50 235.0 275.0
C14 N13 C12 C5 109.7 155.0
C12 N13 C14 HN13 180.0 180.1
C14 N13 C12 H12 353.0 35.0
C34 N35 C36 HN35 180.0 180.0
C58 C56 C36 H561 120.0 240.0
C58 C56 C36 H562 242.2 120.0
C56 C36 N35 HN35 312.2 265.0
C37 C36 C56 H36 121.3 120.0
C56 C36 C37 H371 302.9 295.0
C56 C36 C37 H372 63.1 55.0
H561 C56 C36 H562 122.2 240.0
C37 C36 N35 HN35 71.2 25.0
C56 C36 C37 H36 240.4 240.0
C37 C36 C56 H561 71.4 295.0
C37 C36 C56 H562 309.2 55.0
N38 C37 C36 H371 240.0 240.0
N38 C37 C36 H372 119.8 120.0
H371 C37 C36 H372 239.8 240.0
C1 C39 C8 H39 118.3 120.0
C8 C39 N38 HN38 288.1 208.9
C39 N38 C37 H371 6.5 60.0
C39 N38 C37 H372 246.3 300.0
N38 C37 C36 H36 302.5 295.0
C36 C37 N38 H371 120.0 120.0
C36 C37 N38 H372 240.2 240.0
H371 C37 N38 H372 120.2 120.0
C14 N13 C12 HN13 180.0 179.9
C50 C12 N13 C5 125.3 120.0
C50 C12 N13 H12 242.0 240.0
N13 C12 C50 H501 62.6 299.9
N13 C12 C50 H502 182.6 60.0
N13 C12 C50 H503 302.6 180.0
N13 C12 C5 C4 238.6 220.0
N13 C12 C5 C6 58.9 40.3
C5 C12 N13 H12 116.7 119.9
N13 C12 C50 C5 234.8 240.0
C50 C12 N13 HN13 55.0 95.0
N13 C12 C50 H12 118.1 120.0
C50 C12 C5 C4 114.4 100.0
C50 C12 C5 C6 294.7 280.3
C5 C12 C50 H12 243.3 240.0
H501 C50 C12 H502 240.0 239.9
H501 C50 C12 H503 120.0 119.9
H502 C50 C12 H503 240.0 240.0
N13 C12 C5 C50 124.2 120.0
C5 C12 N13 HN13 289.7 335.0
N13 C12 C5 H12 242.1 240.0
C50 C12 C5 H12 117.8 120.0
C5 C12 C50 H501 187.8 60.0
C5 C12 C50 H502 307.8 180.0
C5 C12 C50 H503 67.9 300.0
C6 C5 C12 C4 180.3 180.3
C12 C5 C4 C3 180.3 180.0
C12 C5 C4 H4 0.3 0.0
C12 C5 C6 C7 179.8 180.0
C12 C5 C6 H6 359.7 360.0
C12 C5 C4 C6 180.3 180.3
C4 C5 C12 H12 356.5 340.0
C4 C5 C6 C7 0.1 0.3
C4 C5 C6 H6 180.1 180.3
C5 C4 C3 C2 359.8 360.0
C3 C4 C5 H4 180.0 180.0
C5 C4 C3 H3 179.8 180.0
C12 C5 C6 C4 179.7 179.7
C6 C5 C12 H12 176.9 160.3
C6 C5 C4 C3 0.0 359.7
C6 C5 C4 H4 180.0 179.7
C5 C6 C7 C2 0.0 0.0
C7 C6 C5 H6 180.0 180.0
C5 C6 C7 H7 180.0 180.0
C5 C4 C3 H4 180.0 180.0
C7 C2 C3 C4 0.3 0.3
C4 C3 C2 F1 179.8 180.0
C2 C3 C4 H3 180.0 180.0
C7 C6 C5 C4 0.1 0.3
C5 C6 C7 H6 180.0 180.0
C6 C7 C2 C3 359.8 359.7
C6 C7 C2 F1 180.3 180.0
C2 C7 C6 H7 180.0 180.0
C2 C3 C4 H4 179.8 180.0
C4 C3 C2 H3 180.0 180.0
C7 C2 C3 F1 180.5 180.3
C3 C2 C7 H7 179.8 179.7
C4 C3 C2 C7 0.3 0.3
C2 C7 C6 H6 180.0 180.0
C6 C7 C2 H7 180.0 180.0
C3 C2 C7 F1 179.5 179.7
C7 C2 C3 H3 180.3 180.3
C7 C2 F1 C3 179.5 179.7
F1 C2 C3 H3 359.8 0.0
F1 C2 C7 H7 0.3 0.0
H222 C22 H221 H223 120.0 120.1
H221 C22 H222 H223 240.0 239.9
H221 C22 H223 H222 120.0 120.0
H291 C29 N24 C19 242.5 90.0
H292 C29 H291 H293 120.0 120.0
H292 C29 N24 C19 2.5 210.0
H291 C29 H292 H293 240.0 240.1
H293 C29 N24 C19 122.5 330.1
H291 C29 H293 H292 119.9 119.9
H20 C20 C19 C18 180.0 180.2
C19 C20 H20 C15 180.0 180.0
H20 C20 C15 C14 1.1 0.1
C14 N13 HN13 C12 180.0 180.1
HN13 N13 C12 C50 55.0 95.0
HN13 N13 C12 C5 289.7 335.0
HN13 N13 C12 H12 173.0 215.1
N13 C12 H12 C50 240.7 240.0
N13 C12 H12 C5 120.3 120.0
H12 C12 N13 HN13 173.0 215.1
C50 C12 H12 C5 239.6 240.0
H12 C12 C50 H501 304.5 179.9
H12 C12 C50 H502 64.5 300.0
H12 C12 C50 H503 184.5 60.0
H12 C12 C5 C4 356.5 340.0
H12 C12 C5 C6 176.9 160.3
H501 C50 C12 C5 187.8 60.0
H501 C50 C12 H12 304.5 179.9
C12 C50 H501 H502 120.0 120.1
C12 C50 H501 H503 240.0 240.0
H502 C50 H501 H503 120.0 119.9
H502 C50 C12 C5 307.8 180.0
H502 C50 C12 H12 64.5 300.0
C12 C50 H502 H501 240.0 239.9
C12 C50 H502 H503 120.0 120.0
H501 C50 H502 H503 240.0 240.1
H503 C50 C12 C5 67.9 300.0
H503 C50 C12 H12 184.5 60.0
C12 C50 H503 H501 120.0 120.0
C12 C50 H503 H502 240.0 240.0
H501 C50 H503 H502 120.0 120.0
H6 C6 C5 C4 180.1 180.3
C5 C6 H6 C7 180.0 180.0
H6 C6 C7 C2 180.0 180.0
H6 C6 C7 H7 0.0 360.0
C6 C7 H7 C2 180.0 180.0
H7 C7 C6 H6 0.0 360.0
H7 C7 C2 C3 179.8 179.7
H7 C7 C2 F1 0.3 0.0
C5 C4 H4 C3 180.0 180.0
H4 C4 C3 C2 179.8 180.0
H4 C4 C3 H3 359.8 0.0
C4 C3 H3 C2 180.0 180.0
H3 C3 C4 H4 359.8 0.0
H3 C3 C2 F1 359.8 0.0
C19 C18 H18 C17 180.0 180.1
H18 C18 C17 C34 359.5 0.1
H18 C18 C17 C16 179.7 180.1
H16 C16 C17 C34 0.7 0.1
H36 C36 N35 HN35 192.6 145.0
C56 C36 H36 C37 119.8 120.0
H36 C36 C56 H561 310.1 175.0
H36 C36 C56 H562 187.9 295.0
H36 C36 C37 H371 62.5 55.0
H36 C36 C37 H372 182.7 175.0
C58 C56 H561 H562 118.0 240.0
H561 C56 C36 C37 71.4 295.0
H561 C56 C36 H36 310.1 175.0
C36 C56 H561 H562 242.0 120.0
C58 C56 H562 H561 241.3 120.0
H562 C56 C36 C37 309.2 55.0
H562 C56 C36 H36 187.9 295.0
C36 C56 H562 H561 118.6 240.0
H65 C65 C58 C61 179.9 180.0
H64 C64 C65 H65 0.1 359.9
H64 C64 C63 C62 179.9 180.1
H64 C64 C63 H63 359.8 0.0
C64 C63 H63 C62 180.0 180.1
H63 C63 C64 H64 359.8 0.0
H63 C63 C62 C61 180.2 180.1
H63 C63 C62 H62 0.2 0.1
C63 C62 H62 C61 180.0 180.1
H62 C62 C63 H63 0.2 0.1
H62 C62 C61 H61 359.8 0.4
C58 C61 H61 C62 180.0 180.3
H61 C61 C62 H62 359.8 0.4
H371 C37 C36 H36 62.5 55.0
C36 C37 H371 H372 119.8 120.0
N38 C37 H371 H372 240.3 240.0
H372 C37 C36 H36 182.7 175.0
C36 C37 H372 H371 240.1 240.0
N38 C37 H372 H371 119.8 120.0
HN38 N38 C37 H371 246.5 296.0
HN38 N38 C37 H372 126.3 176.0
H39 C39 N38 HN38 168.6 89.0
H81 C8 C39 H39 31.3 300.0
H82 C8 H81 H83 120.0 120.0
H82 C8 C39 H39 151.3 60.0
H81 C8 H82 H83 240.0 240.0
H83 C8 C39 H39 271.3 180.0
H81 C8 H83 H82 120.0 120.0
H101 C10 C51 C52 177.1 305.1
C51 C10 H101 H102 117.9 240.0
H101 C10 C51 H51 59.6 185.0
H101 C10 N9 HN9 227.1 120.0
H102 C10 C51 C52 299.4 185.0
C51 C10 H102 H101 241.4 120.0
H102 C10 C51 H51 181.9 65.0
H102 C10 N9 HN9 104.9 240.1
C10 C51 H51 C52 120.9 120.0
H51 C51 C10 H101 59.6 185.0
H51 C51 C10 H102 181.9 65.0
H51 C51 C52 H521 232.6 300.0
H51 C51 C52 H522 352.6 60.0
H51 C51 C52 H523 112.6 180.0
H521 C52 C51 H51 232.6 300.0
C51 C52 H521 H522 120.0 120.0
C51 C52 H521 H523 240.0 240.0
H522 C52 H521 H523 120.0 120.0
H522 C52 C51 H51 352.6 60.0
C51 C52 H522 H521 240.0 240.0
C51 C52 H522 H523 120.0 120.0
H521 C52 H522 H523 240.0 240.0
H523 C52 C51 H51 112.6 180.0
C51 C52 H523 H521 120.0 120.0
C51 C52 H523 H522 240.0 240.0
H521 C52 H523 H522 120.0 120.0
H531 C53 C51 H51 271.4 300.0
H532 C53 H531 H533 120.0 119.9
H532 C53 C51 H51 31.4 60.0
H531 C53 H532 H533 240.0 240.1
H533 C53 C51 H51 151.4 180.0
H531 C53 H533 H532 120.0 119.9