PDB Chemical Component IWD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IWD

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.420 1.346
N1 C6 1.350 1.368
N1 C7 1.477 1.465
C2 O2 1.207 1.216
C2 N3 1.414 1.345
N3 C4 1.370 1.348
N3 H3 1.020 0.970
C4 O4 1.217 1.217
C4 C5 1.526 1.417
C5 I5 2.077 2.094
C5 C6 1.347 1.350
C6 H6 1.103 1.080
C7 C8 1.519 1.529
C7 H71 1.115 1.089
C7 H72 1.114 1.090
C8 N8 1.504 1.469
C8 C9 1.538 1.508
C8 H8 1.115 1.089
N8 H81 1.021 1.009
N8 H82 1.020 1.009
C9 O91 1.221 1.208
C9 O92 1.287 1.342
O92 H92O 0.950 0.967

Bond Angles for IWD

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 122.1 120.6
C2 N1 C7 120.5 119.7
N1 C2 O2 124.6 119.5
N1 C2 N3 113.7 120.9
C6 N1 C7 117.2 119.7
N1 C6 C5 124.1 119.7
N1 C6 H6 118.1 120.1
N1 C7 C8 113.6 109.4
N1 C7 H71 110.7 109.5
N1 C7 H72 110.7 109.5
O2 C2 N3 121.7 119.6
C2 N3 C4 128.3 120.3
C2 N3 H3 117.7 119.8
C4 N3 H3 114.0 119.8
N3 C4 O4 122.5 120.3
N3 C4 C5 113.2 119.4
O4 C4 C5 124.3 120.3
C4 C5 I5 120.5 120.4
C4 C5 C6 118.6 119.1
I5 C5 C6 120.9 120.5
C5 C6 H6 117.8 120.1
C8 C7 H71 110.7 109.6
C8 C7 H72 110.7 109.5
C7 C8 N8 108.9 109.5
C7 C8 C9 115.2 109.4
C7 C8 H8 106.3 109.6
H71 C7 H72 99.7 109.5
N8 C8 C9 110.7 109.5
N8 C8 H8 111.2 109.5
C8 N8 H81 108.9 106.7
C8 N8 H82 112.4 106.7
C9 C8 H8 104.4 109.5
C8 C9 O91 119.1 120.0
C8 C9 O92 114.3 120.0
H81 N8 H82 112.4 106.8
O91 C9 O92 126.6 120.1
C9 O92 H92O 114.2 120.0

Torsion Angles for IWD

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 C7 184.5 179.6
C2 N1 C6 C5 357.5 0.3
C2 N1 C6 H6 177.5 180.3
C2 N1 C7 C8 291.1 269.7
C2 N1 C7 H71 56.3 149.6
C2 N1 C7 H72 165.9 29.6
O2 C2 N1 N3 180.2 180.6
N1 C2 N3 C4 359.5 0.6
N1 C2 N3 H3 179.6 180.3
C2 N1 C6 C7 175.6 180.4
C6 N1 C2 O2 181.6 180.0
C6 N1 C2 N3 1.5 359.4
C6 N1 C7 C8 106.8 90.1
C6 N1 C7 H71 232.0 330.0
C6 N1 C7 H72 341.6 210.0
C4 C5 C6 N1 2.2 359.9
I5 C5 C6 N1 179.5 180.0
C5 C6 N1 H6 180.0 180.1
C2 N1 C7 C6 184.3 179.6
C7 N1 C2 O2 357.1 0.4
C7 N1 C2 N3 176.9 179.8
C7 N1 C6 C5 181.9 180.0
C7 N1 C6 H6 1.9 359.9
C8 C7 N1 H71 234.8 120.1
C8 C7 N1 H72 125.2 240.1
N1 C7 C8 N8 290.2 300.0
N1 C7 C8 C9 165.2 180.0
N1 C7 C8 H8 50.2 60.0
H71 C7 N1 H72 250.5 120.0
O2 C2 N1 C6 181.6 180.0
O2 C2 N1 C7 357.1 0.4
N1 C2 O2 N3 179.8 179.4
O2 C2 N3 C4 179.4 180.0
O2 C2 N3 H3 359.4 359.7
N3 C2 N1 C6 1.5 359.4
N3 C2 N1 C7 176.9 179.8
N1 C2 N3 O2 180.2 180.6
C4 N3 C2 H3 180.0 180.3
C2 N3 C4 O4 179.1 179.7
C2 N3 C4 C5 0.3 359.7
C2 N3 C4 H3 180.0 179.7
O4 C4 N3 C5 178.8 180.0
N3 C4 C5 I5 181.7 180.0
N3 C4 C5 C6 358.9 0.0
C2 N3 H3 C4 180.0 180.3
H3 N3 C4 O4 359.1 360.0
H3 N3 C4 C5 180.2 180.0
O4 C4 N3 H3 359.1 360.0
N3 C4 O4 C5 181.3 180.0
O4 C4 C5 I5 2.9 360.0
O4 C4 C5 C6 180.1 180.0
N1 C6 C5 C4 2.2 359.9
C5 C4 N3 H3 180.2 180.0
N3 C4 C5 O4 178.8 180.0
I5 C5 C4 C6 182.8 179.9
C4 C5 C6 H6 182.3 180.0
N1 C6 C5 I5 179.5 180.0
C4 C5 I5 C6 177.2 180.1
I5 C5 C6 H6 359.5 0.1
C5 C6 N1 C7 181.9 180.0
N1 C6 C5 H6 180.0 179.9
C4 C5 C6 I5 182.8 179.9
H6 C6 N1 C7 1.9 359.9
N1 C6 H6 C5 180.0 180.1
N1 C7 C8 H71 125.2 240.0
N1 C7 C8 H72 234.8 120.0
H71 C7 C8 H72 109.6 240.0
N8 C8 C7 C9 125.0 120.0
N8 C8 C7 H8 240.1 240.0
C7 C8 N8 H81 180.0 300.1
C7 C8 N8 H82 54.8 53.9
C9 C8 C7 H8 115.1 120.0
C7 C8 C9 O91 125.9 90.0
C7 C8 C9 O92 308.1 269.9
N1 C7 H71 C8 233.1 120.0
N1 C7 H71 H72 116.6 240.0
C8 C7 H71 H72 243.4 120.0
H71 C7 C8 N8 165.0 60.0
H71 C7 C8 C9 40.0 300.0
H71 C7 C8 H8 285.0 180.0
N1 C7 H72 C8 126.9 240.1
N1 C7 H72 H71 243.4 120.0
C8 C7 H72 H71 116.6 239.9
H72 C7 C8 N8 55.5 180.0
H72 C7 C8 C9 290.5 60.1
H72 C7 C8 H8 175.4 300.0
N8 C8 C7 H71 165.0 60.0
N8 C8 C7 H72 55.5 180.0
C7 C8 N8 C9 232.4 240.1
C7 C8 N8 H8 116.8 120.1
C9 C8 N8 H8 244.5 240.0
N8 C8 C9 O91 1.9 330.1
N8 C8 C9 O92 184.0 150.0
H81 N8 C8 H82 125.2 246.2
C9 C8 C7 H71 40.0 300.0
C9 C8 C7 H72 290.5 60.1
C7 C8 C9 N8 124.1 120.0
C7 C8 C9 H8 243.8 239.9
N8 C8 C9 H8 119.7 120.0
C9 C8 N8 H81 307.6 60.0
C9 C8 N8 H82 182.4 173.8
O91 C9 C8 O92 177.9 180.1
C8 C9 O92 H92O 180.1 180.1
H8 C8 C7 H71 285.0 180.0
H8 C8 C7 H72 175.4 300.0
C7 C8 H8 N8 241.6 240.0
C7 C8 H8 C9 122.2 120.0
N8 C8 H8 C9 240.6 240.0
H8 C8 N8 H81 63.1 180.0
H8 C8 N8 H82 297.9 293.8
H8 C8 C9 O91 242.1 210.1
H8 C8 C9 O92 64.2 30.0
H81 N8 C8 C9 307.6 60.0
H81 N8 C8 H8 63.1 180.0
C8 N8 H81 H82 234.8 113.7
H82 N8 C8 C9 182.4 173.8
H82 N8 C8 H8 297.9 293.8
C8 N8 H82 H81 123.3 246.2
O91 C9 C8 H8 242.1 210.1
C8 C9 O91 O92 182.4 179.9
O91 C9 O92 H92O 2.4 360.0
O92 C9 C8 H8 64.2 30.0
C8 C9 O92 O91 177.7 180.1