PDB Chemical Component ITP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ITP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.508 1.429
C1 C2 1.509 1.529
C1 C6 1.555 1.531
C1 H1 1.090 1.089
O1 P1 1.660 1.609
C2 O2 1.453 1.429
C2 C3 1.500 1.529
C2 H2 1.090 1.090
O2 HO2 1.031 0.966
C3 O3 1.402 1.429
C3 C4 1.608 1.530
C3 H3 1.089 1.089
O3 P3 1.540 1.609
C4 O4 1.417 1.428
C4 C5 1.507 1.528
C4 H4 1.089 1.091
O4 HO4 1.029 0.967
C5 O5 1.472 1.429
C5 C6 1.550 1.530
C5 H5 1.090 1.090
O5 HO5 1.030 0.967
C6 O6 1.382 1.429
C6 H6 1.092 1.090
O6 HO6 1.029 0.968
P1 OP1 1.465 1.609
P1 OP2 1.489 1.610
P1 OP3 1.501 1.480
OP1 HP1 0.950 0.966
OP2 HP2 0.950 0.966
P3 O10 1.403 1.609
P3 O11 1.448 1.480
P3 O12 1.430 1.610
O10 H10 0.949 0.966
O12 H12 0.949 0.966

Bond Angles for ITP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 120.4 109.5
O1 C1 C6 108.7 109.4
O1 C1 H1 108.8 109.5
C1 O1 P1 126.9 106.8
C2 C1 C6 111.5 109.5
C2 C1 H1 107.6 109.5
C1 C2 O2 113.9 109.5
C1 C2 C3 104.8 109.5
C1 C2 H2 107.9 109.4
C6 C1 H1 97.4 109.4
C1 C6 C5 111.8 109.5
C1 C6 O6 106.4 109.5
C1 C6 H6 111.1 109.4
O1 P1 OP1 109.1 109.5
O1 P1 OP2 108.3 109.5
O1 P1 OP3 95.0 109.4
O2 C2 C3 112.4 109.5
O2 C2 H2 107.2 109.4
C2 O2 HO2 109.4 106.9
C3 C2 H2 110.6 109.5
C2 C3 O3 108.7 109.5
C2 C3 C4 112.3 109.4
C2 C3 H3 110.4 109.5
O3 C3 C4 112.5 109.5
O3 C3 H3 110.2 109.5
C3 O3 P3 122.9 106.8
C4 C3 H3 102.6 109.5
C3 C4 O4 106.6 109.5
C3 C4 C5 112.5 109.5
C3 C4 H4 107.9 109.5
O3 P3 O10 98.7 109.5
O3 P3 O11 99.7 109.4
O3 P3 O12 104.7 109.4
O4 C4 C5 105.8 109.5
O4 C4 H4 109.4 109.4
C4 O4 HO4 109.5 106.8
C5 C4 H4 114.4 109.4
C4 C5 O5 106.8 109.6
C4 C5 C6 112.8 109.5
C4 C5 H5 107.4 109.4
O5 C5 C6 107.6 109.5
O5 C5 H5 110.1 109.5
C5 O5 HO5 109.5 106.8
C6 C5 H5 111.9 109.4
C5 C6 O6 106.5 109.5
C5 C6 H6 106.1 109.4
O6 C6 H6 115.0 109.5
C6 O6 HO6 109.6 106.8
OP1 P1 OP2 110.4 109.4
OP1 P1 OP3 118.8 109.5
P1 OP1 HP1 109.1 106.9
OP2 P1 OP3 113.6 109.5
P1 OP2 HP2 108.3 106.7
O10 P3 O11 121.1 109.5
O10 P3 O12 116.0 109.4
P3 O10 H10 98.7 106.9
O11 P3 O12 112.3 109.5
P3 O12 H12 104.7 106.8

Torsion Angles for ITP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 C6 130.3 120.0
C2 C1 O1 H1 235.2 239.9
O1 C1 C2 O2 288.1 300.1
O1 C1 C2 C3 164.9 180.0
O1 C1 C2 H2 47.0 60.0
C6 C1 O1 H1 104.9 119.9
O1 C1 C6 C5 193.8 180.0
O1 C1 C6 O6 309.7 300.1
O1 C1 C6 H6 75.5 60.0
C1 O1 P1 OP1 248.5 180.0
C1 O1 P1 OP2 128.3 300.0
C1 O1 P1 OP3 11.4 60.0
O1 C1 C2 C6 231.0 240.0
O1 C1 C2 H1 125.3 120.1
C2 C1 O1 P1 212.4 240.0
C6 C1 C2 H1 254.4 240.1
C2 C1 C6 C5 58.8 59.9
C2 C1 C6 O6 174.7 180.0
C2 C1 C6 H6 300.5 300.0
O2 C2 C1 C3 123.2 120.1
O2 C2 C1 H2 241.1 240.1
C1 C2 O2 HO2 261.5 59.9
C3 C2 C1 H2 117.9 120.0
C1 C2 C3 O3 187.8 180.0
C1 C2 C3 C4 62.7 60.0
C1 C2 C3 H3 308.8 300.0
O1 C1 C6 C2 135.0 120.0
O1 C1 C6 H1 247.2 240.0
C6 C1 O1 P1 82.1 120.0
C2 C1 C6 H1 112.3 120.0
C6 C1 C2 O2 57.2 60.1
C6 C1 C2 C3 293.9 300.0
C6 C1 C2 H2 176.0 180.0
C4 C5 C6 C1 314.1 300.1
O5 C5 C6 C1 196.6 180.0
C1 C6 C5 H5 75.5 60.0
C5 C6 C1 O6 244.1 239.9
C5 C6 C1 H6 118.3 119.9
O6 C6 C1 H6 234.2 240.0
C1 C6 O6 HO6 291.6 180.0
O1 C1 H1 C2 228.0 239.9
O1 C1 H1 C6 112.6 119.9
H1 C1 O1 P1 337.2 0.1
C2 C1 H1 C6 244.6 240.0
H1 C1 C2 O2 162.8 180.0
H1 C1 C2 C3 39.5 59.9
H1 C1 C2 H2 281.7 299.9
H1 C1 C6 C5 306.6 299.9
H1 C1 C6 O6 62.5 60.0
H1 C1 C6 H6 188.2 180.0
P1 O1 C1 C2 212.4 240.0
P1 O1 C1 C6 82.1 120.0
P1 O1 C1 H1 337.2 0.1
OP1 P1 O1 OP2 120.2 240.0
OP1 P1 O1 OP3 237.2 120.0
O1 P1 OP1 HP1 180.0 180.0
OP2 P1 O1 OP3 117.0 240.0
O1 P1 OP2 HP2 180.0 300.0
O2 C2 C1 C6 57.2 60.1
O2 C2 C1 H1 162.8 180.0
C1 C2 O2 C3 241.0 239.9
C1 C2 O2 H2 119.2 119.9
C3 C2 O2 H2 238.2 240.0
O2 C2 C3 O3 63.7 59.9
O2 C2 C3 C4 298.6 300.0
O2 C2 C3 H3 184.6 180.0
C3 C2 C1 C6 293.9 300.0
C3 C2 C1 H1 39.5 59.9
C1 C2 C3 O2 124.2 120.1
C1 C2 C3 H2 244.0 240.0
O2 C2 C3 H2 119.8 120.0
C3 C2 O2 HO2 20.5 180.0
O3 C3 C2 C4 125.1 120.0
O3 C3 C2 H3 239.0 240.0
C2 C3 O3 P3 152.0 120.0
C4 C3 C2 H3 113.9 120.0
C2 C3 C4 O4 191.0 179.9
C2 C3 C4 C5 306.5 300.0
C2 C3 C4 H4 73.6 60.0
H2 C2 C1 C6 176.0 180.0
H2 C2 C1 H1 281.7 299.9
C1 C2 H2 O2 237.0 240.1
C1 C2 H2 C3 114.1 120.0
O2 C2 H2 C3 237.1 240.0
H2 C2 O2 HO2 142.3 300.1
H2 C2 C3 O3 303.8 300.0
H2 C2 C3 C4 178.7 180.0
H2 C2 C3 H3 64.8 60.0
HO2 O2 C2 C3 20.5 180.0
HO2 O2 C2 H2 142.3 300.1
O3 C3 C2 H2 303.8 300.0
C2 C3 O3 C4 235.0 240.0
C2 C3 O3 H3 121.1 120.1
C4 C3 O3 H3 246.2 240.0
O3 C3 C4 O4 67.9 59.9
O3 C3 C4 C5 183.4 180.0
O3 C3 C4 H4 310.6 300.0
C3 O3 P3 O10 187.9 180.0
C3 O3 P3 O11 311.7 60.0
C3 O3 P3 O12 68.0 300.0
C4 C3 C2 H2 178.7 180.0
C2 C3 C4 O3 123.0 120.0
C2 C3 C4 H3 241.4 240.0
O3 C3 C4 H3 118.4 120.0
C4 C3 O3 P3 277.0 240.0
O4 C4 C3 C5 244.5 239.9
O4 C4 C3 H4 117.4 119.9
C3 C4 O4 HO4 270.0 180.0
C5 C4 C3 H4 232.9 240.0
C3 C4 C5 O5 160.8 180.0
C3 C4 C5 C6 42.8 59.9
C3 C4 C5 H5 278.9 300.0
H3 C3 C2 H2 64.8 60.0
C2 C3 H3 O3 239.9 240.0
C2 C3 H3 C4 119.9 120.0
O3 C3 H3 C4 240.0 240.0
H3 C3 O3 P3 30.9 360.0
H3 C3 C4 O4 309.6 299.9
H3 C3 C4 C5 65.1 60.0
H3 C3 C4 H4 192.2 180.1
P3 O3 C3 C4 277.0 240.0
P3 O3 C3 H3 30.9 360.0
O10 P3 O3 O11 236.2 120.1
O10 P3 O3 O12 119.9 240.0
O3 P3 O10 H10 180.0 180.0
O11 P3 O3 O12 243.7 120.0
O3 P3 O12 H12 180.0 300.1
O4 C4 C3 H3 309.6 299.9
C3 C4 O4 C5 119.9 120.1
C3 C4 O4 H4 243.6 240.1
C5 C4 O4 H4 123.6 119.9
O4 C4 C5 O5 276.8 300.1
O4 C4 C5 C6 158.7 180.0
O4 C4 C5 H5 34.9 60.1
C1 C6 C5 C4 314.1 300.1
C5 C4 C3 H3 65.1 60.0
C3 C4 C5 O4 244.0 239.9
C3 C4 C5 H4 123.6 120.0
O4 C4 C5 H4 239.6 240.1
C5 C4 O4 HO4 150.1 59.9
O5 C5 C4 C6 118.0 120.1
O5 C5 C4 H5 241.9 240.0
C4 C5 O5 HO5 175.4 180.0
C6 C5 C4 H5 123.9 119.9
C4 C5 C6 O6 198.4 180.1
C4 C5 C6 H6 75.4 60.0
H4 C4 C3 H3 192.2 180.1
C3 C4 H4 O4 115.5 119.9
C3 C4 H4 C5 234.0 239.9
O4 C4 H4 C5 118.4 120.0
H4 C4 O4 HO4 26.4 300.0
H4 C4 C5 O5 37.2 60.0
H4 C4 C5 C6 279.2 299.9
H4 C4 C5 H5 155.3 180.0
HO4 O4 C4 C5 150.1 59.9
HO4 O4 C4 H4 26.4 300.0
C1 C6 C5 O5 196.6 180.0
O5 C5 C4 H4 37.2 60.0
C4 C5 O5 C6 238.6 239.9
C4 C5 O5 H5 116.3 120.0
C6 C5 O5 H5 237.7 240.1
O5 C5 C6 O6 80.8 59.9
O5 C5 C6 H6 317.9 299.9
C5 C6 C1 H1 306.6 299.9
C1 C6 C5 O6 115.8 120.1
C1 C6 C5 H6 238.7 240.1
C6 C5 C4 H4 279.2 299.9
C4 C5 C6 O5 117.5 120.1
C4 C5 C6 H5 238.7 240.1
O5 C5 C6 H5 121.2 120.0
C6 C5 O5 HO5 296.8 300.1
O6 C6 C5 H6 123.0 120.0
C5 C6 O6 HO6 51.1 300.1
H5 C5 C4 H4 155.3 180.0
C4 C5 H5 O5 244.1 239.9
C4 C5 H5 C6 124.4 120.0
O5 C5 H5 C6 240.3 240.0
H5 C5 O5 HO5 59.1 60.0
H5 C5 C6 O6 319.7 300.0
H5 C5 C6 H6 196.7 180.0
HO5 O5 C5 C6 296.8 300.1
HO5 O5 C5 H5 59.1 60.0
O6 C6 C1 H1 62.5 60.0
C1 C6 O6 C5 240.6 239.9
C1 C6 O6 H6 123.4 120.0
O6 C6 C5 H5 319.7 300.0
C5 C6 O6 H6 242.8 240.0
H6 C6 C1 H1 188.2 180.0
C1 C6 H6 C5 121.7 119.9
C1 C6 H6 O6 239.2 240.0
H6 C6 C5 H5 196.7 180.0
C5 C6 H6 O6 117.4 120.1
H6 C6 O6 HO6 168.3 60.0
HO6 O6 C6 H6 168.3 60.0
O1 P1 OP1 OP2 241.1 120.1
O1 P1 OP1 OP3 107.2 240.0
OP2 P1 OP1 OP3 226.2 120.0
OP1 P1 OP2 HP2 60.6 60.1
O1 P1 OP2 OP1 119.4 239.9
O1 P1 OP2 OP3 255.8 120.0
OP1 P1 OP2 OP3 136.4 240.0
OP2 P1 OP1 HP1 298.9 60.0
O1 P1 OP3 OP1 244.9 120.0
O1 P1 OP3 OP2 112.5 240.0
OP1 P1 OP3 OP2 227.6 119.9
OP3 P1 OP1 HP1 72.7 300.0
OP3 P1 OP2 HP2 284.3 180.0
HP1 OP1 P1 OP2 298.9 60.0
HP1 OP1 P1 OP3 72.7 300.0
HP2 OP2 P1 OP3 284.3 180.0
O3 P3 O10 O11 107.0 240.0
O3 P3 O10 O12 248.9 120.0
O11 P3 O10 O12 141.9 240.0
O10 P3 O12 H12 72.4 60.1
O3 P3 O11 O10 253.6 120.1
O3 P3 O11 O12 110.4 240.0
O10 P3 O11 O12 216.8 120.0
O11 P3 O10 H10 73.1 300.1
O11 P3 O12 H12 287.2 180.1
O3 P3 O12 O10 107.6 240.0
O3 P3 O12 O11 252.8 120.0
O10 P3 O12 O11 145.2 240.0
O12 P3 O10 H10 291.1 60.1
H10 O10 P3 O11 73.1 300.1
H10 O10 P3 O12 291.1 60.1