PDB Chemical Component ISJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ISJ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.539 |
1.507 |
C1 |
C6 |
1.548 |
1.528 |
C1 |
O11 |
1.448 |
1.429 |
C2 |
C3 |
1.424 |
1.346 |
C3 |
C4 |
1.497 |
1.480 |
C3 |
C7 |
1.453 |
1.476 |
C4 |
C5 |
1.309 |
1.326 |
C5 |
C6 |
1.468 |
1.505 |
C6 |
O10 |
1.369 |
1.429 |
C7 |
O8 |
1.116 |
1.215 |
C7 |
O9 |
1.313 |
1.347 |
O11 |
C12 |
1.405 |
1.360 |
C12 |
C13 |
1.514 |
1.474 |
C12 |
C16 |
1.357 |
1.334 |
C13 |
O14 |
1.212 |
1.215 |
C13 |
O15 |
1.324 |
1.348 |
C1 |
H1 |
1.100 |
1.090 |
C2 |
H2 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.079 |
C6 |
H6 |
1.100 |
1.090 |
O9 |
HO9 |
0.950 |
0.967 |
O10 |
HO10 |
0.950 |
0.968 |
O15 |
HO15 |
0.950 |
0.966 |
C16 |
H16 |
1.080 |
1.080 |
C16 |
H16A |
1.080 |
1.079 |
Bond Angles for ISJ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
117.7 |
109.9 |
C2 |
C1 |
O11 |
108.6 |
109.4 |
C1 |
C2 |
C3 |
120.2 |
119.9 |
C2 |
C1 |
H1 |
105.8 |
109.4 |
C1 |
C2 |
H2 |
119.9 |
120.1 |
C6 |
C1 |
O11 |
113.8 |
109.4 |
C1 |
C6 |
C5 |
111.1 |
110.1 |
C1 |
C6 |
O10 |
111.2 |
109.4 |
C6 |
C1 |
H1 |
99.6 |
109.4 |
C1 |
C6 |
H6 |
105.9 |
109.4 |
C1 |
O11 |
C12 |
117.7 |
117.0 |
O11 |
C1 |
H1 |
110.5 |
109.3 |
C2 |
C3 |
C4 |
117.8 |
119.4 |
C2 |
C3 |
C7 |
122.9 |
120.3 |
C3 |
C2 |
H2 |
119.9 |
120.0 |
C4 |
C3 |
C7 |
119.3 |
120.3 |
C3 |
C4 |
C5 |
120.7 |
119.7 |
C3 |
C4 |
H4 |
119.6 |
120.1 |
C3 |
C7 |
O8 |
122.4 |
120.0 |
C3 |
C7 |
O9 |
119.1 |
120.0 |
C4 |
C5 |
C6 |
128.6 |
120.4 |
C5 |
C4 |
H4 |
119.6 |
120.1 |
C4 |
C5 |
H5 |
115.7 |
119.8 |
C5 |
C6 |
O10 |
105.3 |
109.4 |
C6 |
C5 |
H5 |
115.7 |
119.8 |
C5 |
C6 |
H6 |
111.8 |
109.3 |
O10 |
C6 |
H6 |
111.6 |
109.3 |
C6 |
O10 |
HO10 |
109.5 |
114.0 |
O8 |
C7 |
O9 |
118.5 |
120.0 |
C7 |
O9 |
HO9 |
109.5 |
117.0 |
O11 |
C12 |
C13 |
123.2 |
120.0 |
O11 |
C12 |
C16 |
119.6 |
120.0 |
C13 |
C12 |
C16 |
117.1 |
120.0 |
C12 |
C13 |
O14 |
118.0 |
120.0 |
C12 |
C13 |
O15 |
119.0 |
120.0 |
C12 |
C16 |
H16 |
120.0 |
120.0 |
C12 |
C16 |
H16A |
120.0 |
120.0 |
O14 |
C13 |
O15 |
123.0 |
120.0 |
C13 |
O15 |
HO15 |
109.5 |
117.0 |
H16 |
C16 |
H16A |
120.0 |
120.0 |
Torsion Angles for ISJ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
O11 |
131.2 |
120.1 |
C2 |
C1 |
C6 |
C5 |
21.8 |
309.8 |
C2 |
C1 |
C6 |
O10 |
138.7 |
70.0 |
C6 |
C1 |
C2 |
H1 |
249.9 |
239.8 |
C2 |
C1 |
C6 |
H6 |
260.2 |
189.7 |
C2 |
C1 |
O11 |
C12 |
167.5 |
275.6 |
O11 |
C1 |
C2 |
H1 |
118.7 |
119.7 |
C1 |
C2 |
C3 |
C4 |
357.7 |
359.9 |
C1 |
C2 |
C3 |
C7 |
178.5 |
179.9 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
O11 |
231.2 |
239.9 |
C6 |
C1 |
C2 |
C3 |
346.9 |
34.9 |
C2 |
C1 |
C6 |
H1 |
113.7 |
120.1 |
C6 |
C1 |
C2 |
H2 |
166.9 |
214.9 |
C6 |
C1 |
O11 |
C12 |
34.2 |
155.2 |
O11 |
C1 |
C6 |
H1 |
242.4 |
240.3 |
C4 |
C5 |
C6 |
C1 |
341.6 |
35.2 |
C5 |
C6 |
C1 |
O10 |
243.0 |
239.8 |
C1 |
C6 |
C5 |
H5 |
161.7 |
215.2 |
C5 |
C6 |
C1 |
H6 |
121.5 |
120.2 |
O10 |
C6 |
C1 |
H6 |
238.5 |
240.4 |
C1 |
C6 |
O10 |
HO10 |
180.0 |
180.0 |
C2 |
C1 |
O11 |
C6 |
133.3 |
120.5 |
O11 |
C1 |
C2 |
C3 |
215.7 |
274.7 |
C2 |
C1 |
O11 |
H1 |
244.3 |
240.3 |
O11 |
C1 |
C2 |
H2 |
35.7 |
94.8 |
O11 |
C1 |
C6 |
C5 |
150.5 |
69.9 |
O11 |
C1 |
C6 |
O10 |
267.5 |
190.2 |
C6 |
C1 |
O11 |
H1 |
111.0 |
119.8 |
O11 |
C1 |
C6 |
H6 |
29.0 |
309.8 |
C1 |
O11 |
C12 |
C13 |
93.3 |
185.3 |
C1 |
O11 |
C12 |
C16 |
269.8 |
5.3 |
C3 |
C2 |
C1 |
C6 |
346.9 |
34.9 |
C3 |
C2 |
C1 |
O11 |
215.7 |
274.7 |
C3 |
C2 |
C1 |
H1 |
97.0 |
155.0 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
C7 |
179.2 |
180.0 |
C2 |
C3 |
C4 |
C5 |
8.0 |
340.7 |
C2 |
C3 |
C4 |
H4 |
188.0 |
160.6 |
C2 |
C3 |
C7 |
O8 |
1.7 |
0.0 |
C2 |
C3 |
C7 |
O9 |
183.1 |
180.0 |
C2 |
C3 |
C4 |
C7 |
180.8 |
180.0 |
C4 |
C3 |
C2 |
H2 |
177.7 |
179.9 |
C4 |
C3 |
C7 |
O8 |
182.5 |
180.0 |
C4 |
C3 |
C7 |
O9 |
3.9 |
360.0 |
C3 |
C4 |
C5 |
C6 |
3.6 |
359.8 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
H5 |
183.5 |
179.9 |
C2 |
C3 |
C7 |
C4 |
179.2 |
180.0 |
C7 |
C3 |
C2 |
H2 |
358.5 |
359.9 |
C7 |
C3 |
C4 |
C5 |
187.2 |
160.7 |
C7 |
C3 |
C4 |
H4 |
7.2 |
340.7 |
O8 |
C7 |
C3 |
O9 |
178.6 |
180.0 |
C3 |
C7 |
O9 |
HO9 |
178.6 |
180.0 |
C1 |
C6 |
C5 |
C4 |
341.6 |
35.2 |
C5 |
C4 |
C3 |
C7 |
187.2 |
160.7 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
O10 |
221.1 |
275.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H6 |
99.7 |
155.4 |
C5 |
C6 |
C1 |
O11 |
150.5 |
69.9 |
C1 |
C6 |
C5 |
O10 |
120.5 |
120.2 |
C5 |
C6 |
C1 |
H1 |
268.1 |
189.7 |
C1 |
C6 |
C5 |
H6 |
241.9 |
239.8 |
C6 |
C5 |
C4 |
H4 |
183.6 |
179.8 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
O10 |
C6 |
C5 |
H6 |
121.4 |
119.6 |
C5 |
C6 |
O10 |
HO10 |
300.5 |
300.7 |
O10 |
C6 |
C1 |
O11 |
267.5 |
190.2 |
C1 |
C6 |
O10 |
C5 |
239.5 |
239.3 |
O10 |
C6 |
C1 |
H1 |
25.1 |
309.9 |
C1 |
C6 |
O10 |
H6 |
118.1 |
119.7 |
O10 |
C6 |
C5 |
H5 |
41.1 |
95.0 |
C5 |
C6 |
O10 |
H6 |
238.5 |
240.3 |
C3 |
C7 |
O8 |
O9 |
181.4 |
180.0 |
O8 |
C7 |
O9 |
HO9 |
0.0 |
360.0 |
C3 |
C7 |
O9 |
O8 |
178.6 |
180.0 |
C12 |
O11 |
C1 |
H1 |
283.2 |
35.3 |
C13 |
C12 |
O11 |
C16 |
183.5 |
180.0 |
O11 |
C12 |
C13 |
O14 |
312.0 |
0.1 |
O11 |
C12 |
C13 |
O15 |
130.6 |
180.0 |
O11 |
C12 |
C16 |
H16 |
183.3 |
185.6 |
O11 |
C12 |
C16 |
H16A |
3.3 |
5.6 |
O11 |
C12 |
C13 |
C16 |
176.6 |
180.0 |
C13 |
C12 |
C16 |
H16 |
0.0 |
5.6 |
C13 |
C12 |
C16 |
H16A |
180.0 |
185.7 |
O14 |
C13 |
C12 |
O15 |
181.3 |
180.1 |
C12 |
C13 |
O15 |
HO15 |
181.4 |
180.1 |
O11 |
C12 |
C16 |
C13 |
183.3 |
180.0 |
C16 |
C12 |
C13 |
O14 |
135.4 |
180.0 |
C16 |
C12 |
C13 |
O15 |
314.1 |
360.0 |
H16 |
C16 |
C12 |
H16A |
180.0 |
180.0 |
O14 |
C13 |
C12 |
C16 |
135.4 |
180.0 |
C12 |
C13 |
O14 |
O15 |
178.6 |
179.9 |
O14 |
C13 |
O15 |
HO15 |
360.0 |
0.0 |
O15 |
C13 |
C12 |
C16 |
314.1 |
360.0 |
C12 |
C13 |
O15 |
O14 |
181.4 |
180.1 |
C2 |
C1 |
H1 |
C6 |
237.4 |
239.5 |
C2 |
C1 |
H1 |
O11 |
117.4 |
119.7 |
H1 |
C1 |
C2 |
C3 |
97.0 |
155.0 |
H1 |
C1 |
C2 |
H2 |
277.0 |
335.1 |
C6 |
C1 |
H1 |
O11 |
240.0 |
240.2 |
H1 |
C1 |
C6 |
C5 |
268.1 |
189.7 |
H1 |
C1 |
C6 |
O10 |
25.1 |
309.9 |
H1 |
C1 |
C6 |
H6 |
146.6 |
69.5 |
H1 |
C1 |
O11 |
C12 |
283.2 |
35.3 |
H2 |
C2 |
C1 |
C6 |
166.9 |
214.9 |
H2 |
C2 |
C1 |
O11 |
35.7 |
94.8 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
H1 |
277.0 |
335.1 |
H2 |
C2 |
C3 |
C4 |
177.7 |
179.9 |
H2 |
C2 |
C3 |
C7 |
358.5 |
359.9 |
H4 |
C4 |
C3 |
C7 |
7.2 |
340.7 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
183.6 |
179.8 |
H4 |
C4 |
C5 |
H5 |
3.5 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
H4 |
3.5 |
359.9 |
H5 |
C5 |
C6 |
O10 |
41.1 |
95.0 |
H5 |
C5 |
C6 |
H6 |
279.7 |
335.3 |
H6 |
C6 |
C1 |
O11 |
29.0 |
309.8 |
C1 |
C6 |
H6 |
C5 |
121.1 |
120.6 |
C1 |
C6 |
H6 |
O10 |
238.8 |
240.3 |
H6 |
C6 |
C1 |
H1 |
146.6 |
69.5 |
C5 |
C6 |
H6 |
O10 |
117.7 |
119.7 |
H6 |
C6 |
C5 |
H5 |
279.7 |
335.3 |
H6 |
C6 |
O10 |
HO10 |
62.0 |
60.3 |
HO10 |
O10 |
C6 |
H6 |
62.0 |
60.3 |
C12 |
C16 |
H16 |
H16A |
180.0 |
180.0 |
C12 |
C16 |
H16A |
H16 |
180.0 |
180.0 |