PDB Chemical Component IRG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IRG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C6 |
1.349 |
1.325 |
N1 |
C2 |
1.355 |
1.331 |
CAP |
C2 |
1.404 |
1.482 |
C2 |
N3 |
1.347 |
1.319 |
N3 |
C4 |
1.343 |
1.340 |
C5 |
C4 |
1.391 |
1.419 |
C4 |
CAI |
1.394 |
1.399 |
C6 |
C5 |
1.391 |
1.416 |
C5 |
CAH |
1.407 |
1.399 |
NAN |
C6 |
1.357 |
1.379 |
CAO |
NAA |
1.335 |
1.392 |
NAA |
HNAA |
1.000 |
0.970 |
NAA |
HNAB |
1.000 |
0.970 |
CAC |
CAB |
1.390 |
1.383 |
CAB |
CAD |
1.410 |
1.384 |
CAB |
HAB |
1.080 |
1.080 |
CAC |
CAE |
1.396 |
1.380 |
CAC |
HAC |
1.080 |
1.080 |
CAD |
CAF |
1.406 |
1.380 |
CAD |
HAD |
1.080 |
1.079 |
CAE |
CAP |
1.393 |
1.395 |
CAE |
HAE |
1.080 |
1.080 |
CAP |
CAF |
1.416 |
1.394 |
CAF |
HAF |
1.080 |
1.080 |
CAH |
CAG |
1.399 |
1.362 |
CAG |
CAO |
1.406 |
1.400 |
CAG |
HAG |
1.080 |
1.079 |
CAH |
HAH |
1.080 |
1.080 |
CAI |
CAO |
1.396 |
1.382 |
CAI |
HAI |
1.080 |
1.080 |
CAK |
CAJ |
1.520 |
1.530 |
CAJ |
CAU |
1.529 |
1.530 |
CAJ |
HAJ |
1.100 |
1.090 |
CAJ |
HAJA |
1.100 |
1.090 |
CAK |
CAU |
1.553 |
1.530 |
CAK |
HAK |
1.101 |
1.090 |
CAK |
HAKA |
1.100 |
1.090 |
CAU |
NAN |
1.464 |
1.466 |
NAN |
HNAN |
1.000 |
0.970 |
CAU |
HAU |
1.100 |
1.090 |
Bond Angles for IRG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
123.0 |
121.4 |
N1 |
C6 |
C5 |
118.1 |
118.4 |
N1 |
C2 |
N3 |
118.7 |
122.7 |
C2 |
N3 |
C4 |
120.9 |
120.5 |
N3 |
C4 |
CAI |
120.7 |
121.8 |
C5 |
C4 |
CAI |
118.6 |
119.4 |
C4 |
CAI |
CAO |
121.6 |
119.4 |
C4 |
CAI |
HAI |
119.2 |
120.3 |
C6 |
C5 |
CAH |
121.5 |
121.9 |
C5 |
CAH |
CAG |
121.8 |
119.8 |
C5 |
CAH |
HAH |
119.1 |
120.1 |
CAO |
NAA |
HNAA |
109.5 |
120.0 |
CAO |
NAA |
HNAB |
109.5 |
120.0 |
HNAA |
NAA |
HNAB |
109.5 |
120.0 |
CAC |
CAB |
CAD |
118.7 |
120.3 |
CAC |
CAB |
HAB |
120.7 |
119.9 |
CAD |
CAB |
HAB |
120.6 |
119.9 |
CAB |
CAD |
CAF |
120.4 |
120.1 |
CAB |
CAD |
HAD |
119.8 |
120.0 |
CAE |
CAC |
HAC |
119.6 |
120.0 |
CAC |
CAE |
CAP |
121.7 |
119.8 |
CAC |
CAE |
HAE |
119.1 |
120.1 |
CAF |
CAD |
HAD |
119.8 |
119.9 |
CAD |
CAF |
HAF |
119.7 |
120.1 |
CAP |
CAE |
HAE |
119.1 |
120.1 |
CAE |
CAP |
CAF |
117.9 |
119.7 |
CAP |
CAF |
HAF |
119.8 |
120.0 |
CAH |
CAG |
CAO |
117.6 |
120.8 |
CAH |
CAG |
HAG |
121.2 |
119.6 |
CAO |
CAG |
HAG |
121.2 |
119.6 |
CAG |
CAO |
CAI |
120.4 |
120.7 |
CAO |
CAI |
HAI |
119.2 |
120.3 |
CAK |
CAJ |
CAU |
61.2 |
60.0 |
CAK |
CAJ |
HAJ |
119.8 |
117.5 |
CAK |
CAJ |
HAJA |
119.8 |
117.5 |
CAU |
CAJ |
HAJ |
119.8 |
117.5 |
CAU |
CAJ |
HAJA |
119.8 |
117.5 |
CAJ |
CAU |
CAK |
59.1 |
60.0 |
CAJ |
CAU |
NAN |
114.1 |
117.5 |
CAJ |
CAU |
HAU |
117.9 |
117.5 |
HAJ |
CAJ |
HAJA |
109.5 |
115.5 |
CAU |
CAK |
HAK |
120.1 |
117.5 |
CAU |
CAK |
HAKA |
120.1 |
117.4 |
CAK |
CAU |
NAN |
114.6 |
117.5 |
CAK |
CAU |
HAU |
117.5 |
117.6 |
HAK |
CAK |
HAKA |
109.5 |
115.6 |
CAU |
NAN |
HNAN |
106.7 |
120.0 |
Torsion Angles for IRG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
N1 |
C2 |
N3 |
1.6 |
0.0 |
N1 |
C6 |
C5 |
CAH |
179.4 |
180.0 |
C2 |
N1 |
C6 |
C5 |
357.4 |
0.0 |
N1 |
C2 |
N3 |
C4 |
358.4 |
360.0 |
N3 |
C2 |
N1 |
C6 |
1.6 |
0.0 |
C2 |
N3 |
C4 |
CAI |
182.4 |
179.9 |
C5 |
C4 |
N3 |
CAI |
180.2 |
180.1 |
N3 |
C4 |
CAI |
CAO |
181.6 |
180.0 |
N3 |
C4 |
CAI |
HAI |
1.6 |
0.1 |
N1 |
C6 |
C5 |
C4 |
3.5 |
360.0 |
N3 |
C4 |
C5 |
CAI |
179.8 |
179.9 |
C5 |
C4 |
CAI |
CAO |
1.4 |
359.9 |
C5 |
C4 |
CAI |
HAI |
181.4 |
180.0 |
CAG |
CAO |
CAI |
C4 |
357.7 |
0.1 |
CAO |
CAI |
C4 |
HAI |
180.0 |
179.9 |
C6 |
C5 |
C4 |
CAI |
176.7 |
180.1 |
C6 |
C5 |
CAH |
CAG |
182.3 |
179.9 |
C6 |
C5 |
CAH |
HAH |
2.3 |
359.9 |
CAH |
C5 |
C4 |
CAI |
0.7 |
0.1 |
C5 |
CAH |
CAG |
CAO |
0.9 |
0.0 |
C5 |
CAH |
CAG |
HAG |
180.9 |
180.0 |
C4 |
CAI |
CAO |
NAA |
178.4 |
180.0 |
HNAA |
NAA |
CAO |
HNAB |
240.0 |
180.1 |
CAO |
NAA |
HNAA |
HNAB |
120.0 |
179.9 |
CAO |
NAA |
HNAB |
HNAA |
240.0 |
180.1 |
CAD |
CAB |
CAC |
HAB |
180.0 |
180.3 |
CAC |
CAB |
CAD |
CAF |
359.5 |
359.7 |
CAC |
CAB |
CAD |
HAD |
179.5 |
179.7 |
CAC |
CAB |
CAD |
HAB |
180.0 |
179.7 |
CAF |
CAD |
CAB |
HAD |
180.0 |
180.0 |
CAB |
CAD |
CAF |
HAF |
180.5 |
180.0 |
CAC |
CAB |
HAB |
CAD |
180.0 |
180.3 |
HAB |
CAB |
CAD |
CAF |
179.5 |
180.0 |
HAB |
CAB |
CAD |
HAD |
359.5 |
0.0 |
CAE |
CAC |
CAB |
CAD |
0.0 |
0.0 |
CAE |
CAC |
CAB |
HAB |
180.0 |
179.7 |
CAP |
CAE |
CAC |
HAE |
180.0 |
180.1 |
CAC |
CAE |
CAP |
CAF |
359.6 |
0.2 |
HAC |
CAC |
CAB |
CAD |
180.0 |
180.0 |
HAC |
CAC |
CAB |
HAB |
0.0 |
359.6 |
HAC |
CAC |
CAE |
CAP |
180.4 |
180.1 |
HAC |
CAC |
CAE |
HAE |
0.4 |
0.0 |
CAF |
CAD |
CAB |
HAB |
179.5 |
180.0 |
CAB |
CAD |
CAF |
HAD |
180.0 |
180.0 |
CAE |
CAP |
CAF |
CAD |
360.0 |
359.5 |
CAP |
CAF |
CAD |
HAF |
180.0 |
180.6 |
HAD |
CAD |
CAB |
HAB |
359.5 |
0.0 |
CAB |
CAD |
HAD |
CAF |
180.0 |
180.0 |
HAD |
CAD |
CAF |
HAF |
0.5 |
0.0 |
CAP |
CAE |
CAC |
HAC |
180.4 |
180.1 |
CAC |
CAE |
CAP |
HAE |
180.0 |
179.9 |
CAE |
CAP |
CAF |
HAF |
180.0 |
180.0 |
HAE |
CAE |
CAC |
HAC |
0.4 |
0.0 |
CAC |
CAE |
HAE |
CAP |
180.0 |
180.1 |
HAE |
CAE |
CAP |
CAF |
179.6 |
180.3 |
CAP |
CAF |
CAD |
HAD |
180.5 |
180.6 |
CAD |
CAF |
CAP |
HAF |
180.0 |
179.4 |
CAF |
CAP |
CAE |
HAE |
179.6 |
180.3 |
HAF |
CAF |
CAD |
HAD |
0.5 |
0.0 |
C5 |
CAH |
CAG |
HAH |
180.0 |
180.0 |
CAO |
CAG |
CAH |
HAG |
180.0 |
180.0 |
CAH |
CAG |
CAO |
CAI |
1.1 |
359.9 |
C4 |
CAI |
CAO |
CAG |
357.7 |
0.1 |
CAG |
CAO |
NAA |
HNAA |
180.0 |
0.1 |
CAG |
CAO |
NAA |
HNAB |
300.0 |
180.0 |
CAH |
CAG |
CAO |
HAG |
180.0 |
180.0 |
CAG |
CAO |
CAI |
HAI |
177.7 |
180.0 |
CAH |
CAG |
HAG |
CAO |
180.0 |
180.0 |
HAG |
CAG |
CAO |
CAI |
181.1 |
180.0 |
C5 |
CAH |
HAH |
CAG |
180.0 |
180.0 |
HAH |
CAH |
CAG |
CAO |
180.9 |
180.1 |
HAH |
CAH |
CAG |
HAG |
0.9 |
0.0 |
C4 |
CAI |
CAO |
HAI |
180.0 |
180.1 |
CAI |
CAO |
NAA |
HNAA |
359.2 |
180.1 |
CAI |
CAO |
NAA |
HNAB |
119.2 |
0.0 |
CAI |
CAO |
CAG |
HAG |
181.1 |
180.0 |
C4 |
CAI |
HAI |
CAO |
180.0 |
179.9 |
CAU |
CAJ |
CAK |
HAJ |
250.2 |
252.5 |
CAU |
CAJ |
CAK |
HAJA |
109.8 |
107.5 |
CAJ |
CAU |
CAK |
CAJ |
-0.0 |
-0.0 |
CAK |
CAJ |
CAU |
NAN |
254.7 |
252.5 |
CAK |
CAJ |
CAU |
HAU |
106.9 |
107.5 |
HAJ |
CAJ |
CAK |
HAJA |
219.6 |
215.0 |
CAK |
CAJ |
CAU |
HAJ |
109.8 |
107.5 |
CAK |
CAJ |
CAU |
HAJA |
250.2 |
252.5 |
HAJ |
CAJ |
CAU |
HAJA |
140.4 |
145.0 |
CAJ |
CAU |
CAK |
HAK |
250.6 |
252.5 |
CAJ |
CAU |
CAK |
HAKA |
109.4 |
107.5 |
CAK |
CAU |
CAJ |
NAN |
105.3 |
107.5 |
CAK |
CAU |
CAJ |
HAU |
253.1 |
252.5 |
CAJ |
CAU |
NAN |
HNAN |
147.2 |
25.0 |
CAK |
CAJ |
HAJ |
CAU |
288.1 |
291.3 |
CAK |
CAJ |
HAJ |
HAJA |
144.1 |
145.7 |
CAU |
CAJ |
HAJ |
HAJA |
215.9 |
214.3 |
HAJ |
CAJ |
CAU |
CAK |
250.2 |
252.5 |
HAJ |
CAJ |
CAU |
NAN |
144.9 |
145.0 |
HAJ |
CAJ |
CAU |
HAU |
357.1 |
0.0 |
CAK |
CAJ |
HAJA |
CAU |
71.9 |
68.7 |
CAK |
CAJ |
HAJA |
HAJ |
215.9 |
214.3 |
CAU |
CAJ |
HAJA |
HAJ |
144.1 |
145.7 |
HAJA |
CAJ |
CAU |
CAK |
109.8 |
107.5 |
HAJA |
CAJ |
CAU |
NAN |
4.5 |
0.1 |
HAJA |
CAJ |
CAU |
HAU |
216.7 |
215.1 |
CAU |
CAK |
CAJ |
CAU |
-0.0 |
-0.0 |
CAU |
CAK |
CAJ |
HAJ |
109.8 |
107.5 |
CAU |
CAK |
CAJ |
HAJA |
250.2 |
252.5 |
CAK |
CAU |
CAJ |
HAJ |
250.2 |
252.5 |
CAK |
CAU |
CAJ |
HAJA |
109.8 |
107.5 |
CAJ |
CAU |
CAK |
NAN |
255.5 |
252.5 |
CAJ |
CAU |
CAK |
HAU |
107.7 |
107.5 |
HAK |
CAK |
CAU |
HAKA |
141.3 |
145.0 |
CAK |
CAU |
NAN |
HNAN |
81.6 |
316.4 |
HAK |
CAK |
CAJ |
CAU |
109.4 |
107.5 |
HAK |
CAK |
CAJ |
HAJ |
219.2 |
215.0 |
HAK |
CAK |
CAJ |
HAJA |
359.6 |
0.0 |
CAU |
CAK |
HAK |
HAKA |
215.1 |
214.3 |
HAK |
CAK |
CAU |
NAN |
355.1 |
360.0 |
HAK |
CAK |
CAU |
HAU |
142.9 |
145.0 |
HAKA |
CAK |
CAJ |
CAU |
250.6 |
252.6 |
HAKA |
CAK |
CAJ |
HAJ |
0.4 |
0.1 |
HAKA |
CAK |
CAJ |
HAJA |
140.8 |
145.1 |
CAU |
CAK |
HAKA |
HAK |
144.9 |
145.7 |
HAKA |
CAK |
CAU |
NAN |
213.8 |
215.0 |
HAKA |
CAK |
CAU |
HAU |
1.7 |
360.0 |
NAN |
CAU |
CAJ |
HAJ |
144.9 |
145.0 |
NAN |
CAU |
CAJ |
HAJA |
4.5 |
0.1 |
CAJ |
CAU |
NAN |
CAK |
65.6 |
68.6 |
CAJ |
CAU |
NAN |
HAU |
212.8 |
214.3 |
NAN |
CAU |
CAK |
HAK |
355.1 |
360.0 |
NAN |
CAU |
CAK |
HAKA |
213.8 |
215.0 |
CAK |
CAU |
NAN |
HAU |
147.2 |
145.7 |
HAU |
CAU |
CAJ |
HAJ |
357.1 |
0.0 |
HAU |
CAU |
CAJ |
HAJA |
216.7 |
215.1 |
CAJ |
CAU |
HAU |
CAK |
292.3 |
291.3 |
CAJ |
CAU |
HAU |
NAN |
146.0 |
145.7 |
HAU |
CAU |
CAK |
HAK |
142.9 |
145.0 |
HAU |
CAU |
CAK |
HAKA |
1.7 |
360.0 |
CAK |
CAU |
HAU |
NAN |
213.7 |
214.3 |
HAU |
CAU |
NAN |
HNAN |
294.4 |
170.7 |