PDB Chemical Component IRB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IRB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
OAA |
CAO |
1.255 |
1.214 |
OAB |
CAR |
1.245 |
1.218 |
OAC |
NAL |
1.350 |
1.415 |
OAD |
CAO |
1.275 |
1.348 |
BRAE |
CAQ |
1.943 |
1.891 |
CAF |
CAG |
1.412 |
1.385 |
CAF |
CAI |
1.419 |
1.380 |
CAG |
CAQ |
1.403 |
1.381 |
CAH |
CAJ |
1.388 |
1.376 |
CAH |
CAP |
1.390 |
1.400 |
CAI |
CAW |
1.400 |
1.392 |
CAJ |
CAV |
1.382 |
1.395 |
CAK |
CAP |
1.408 |
1.396 |
CAK |
CAX |
1.412 |
1.386 |
NAL |
CAT |
1.334 |
1.306 |
NAM |
CAR |
1.335 |
1.345 |
NAM |
CAY |
1.328 |
1.389 |
NAN |
CAS |
1.351 |
1.370 |
NAN |
CAV |
1.326 |
1.384 |
CAO |
CAP |
1.526 |
1.474 |
CAQ |
CAY |
1.392 |
1.392 |
CAR |
CAU |
1.405 |
1.468 |
CAS |
CAT |
1.405 |
1.479 |
CAS |
CAU |
1.404 |
1.387 |
CAT |
CAX |
1.387 |
1.483 |
CAU |
CAW |
1.414 |
1.479 |
CAV |
CAX |
1.397 |
1.403 |
CAW |
CAY |
1.433 |
1.401 |
OAC |
HOAC |
0.950 |
0.967 |
CAF |
HAF |
1.080 |
1.079 |
CAG |
HAG |
1.080 |
1.079 |
CAH |
HAH |
1.080 |
1.080 |
CAI |
HAI |
1.080 |
1.080 |
CAJ |
HAJ |
1.080 |
1.079 |
CAK |
HAK |
1.080 |
1.080 |
NAM |
HNAM |
1.000 |
0.970 |
NAN |
HNAN |
1.000 |
0.970 |
OAD |
HOAD |
0.950 |
0.966 |
Bond Angles for IRB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAA |
CAO |
OAD |
125.9 |
120.0 |
OAA |
CAO |
CAP |
118.7 |
120.1 |
OAB |
CAR |
NAM |
124.9 |
126.0 |
OAB |
CAR |
CAU |
123.9 |
126.0 |
OAC |
NAL |
CAT |
117.7 |
120.0 |
NAL |
OAC |
HOAC |
109.5 |
114.1 |
OAD |
CAO |
CAP |
113.9 |
120.0 |
CAO |
OAD |
HOAD |
109.5 |
117.0 |
BRAE |
CAQ |
CAG |
122.9 |
120.0 |
BRAE |
CAQ |
CAY |
118.4 |
119.9 |
CAG |
CAF |
CAI |
121.4 |
120.1 |
CAF |
CAG |
CAQ |
119.8 |
120.7 |
CAG |
CAF |
HAF |
119.3 |
119.9 |
CAF |
CAG |
HAG |
120.1 |
119.6 |
CAF |
CAI |
CAW |
119.1 |
119.7 |
CAI |
CAF |
HAF |
119.3 |
120.0 |
CAF |
CAI |
HAI |
120.4 |
120.1 |
CAG |
CAQ |
CAY |
118.6 |
120.1 |
CAQ |
CAG |
HAG |
120.1 |
119.7 |
CAJ |
CAH |
CAP |
120.2 |
120.5 |
CAH |
CAJ |
CAV |
120.0 |
120.3 |
CAJ |
CAH |
HAH |
119.9 |
119.8 |
CAH |
CAJ |
HAJ |
120.0 |
119.8 |
CAH |
CAP |
CAK |
121.1 |
119.7 |
CAH |
CAP |
CAO |
116.2 |
120.2 |
CAP |
CAH |
HAH |
119.9 |
119.8 |
CAI |
CAW |
CAU |
136.0 |
133.3 |
CAI |
CAW |
CAY |
118.4 |
120.4 |
CAW |
CAI |
HAI |
120.5 |
120.1 |
CAJ |
CAV |
NAN |
129.6 |
131.1 |
CAJ |
CAV |
CAX |
120.4 |
119.3 |
CAV |
CAJ |
HAJ |
120.0 |
119.9 |
CAP |
CAK |
CAX |
117.7 |
119.7 |
CAK |
CAP |
CAO |
122.5 |
120.1 |
CAP |
CAK |
HAK |
121.1 |
120.1 |
CAK |
CAX |
CAT |
135.0 |
132.7 |
CAK |
CAX |
CAV |
120.6 |
120.5 |
CAX |
CAK |
HAK |
121.2 |
120.2 |
NAL |
CAT |
CAS |
127.5 |
127.5 |
NAL |
CAT |
CAX |
123.2 |
127.5 |
CAR |
NAM |
CAY |
108.5 |
111.3 |
NAM |
CAR |
CAU |
111.1 |
108.0 |
CAR |
NAM |
HNAM |
125.8 |
124.3 |
NAM |
CAY |
CAQ |
127.6 |
131.8 |
NAM |
CAY |
CAW |
109.8 |
109.2 |
CAY |
NAM |
HNAM |
125.7 |
124.4 |
CAS |
NAN |
CAV |
110.2 |
111.2 |
NAN |
CAS |
CAT |
105.7 |
107.4 |
NAN |
CAS |
CAU |
124.2 |
126.3 |
CAS |
NAN |
HNAN |
124.9 |
124.4 |
NAN |
CAV |
CAX |
110.0 |
109.6 |
CAV |
NAN |
HNAN |
124.9 |
124.4 |
CAQ |
CAY |
CAW |
122.6 |
119.1 |
CAR |
CAU |
CAS |
117.8 |
127.4 |
CAR |
CAU |
CAW |
105.1 |
105.1 |
CAT |
CAS |
CAU |
127.6 |
126.3 |
CAS |
CAT |
CAX |
109.1 |
105.0 |
CAS |
CAU |
CAW |
135.2 |
127.5 |
CAT |
CAX |
CAV |
104.4 |
106.8 |
CAU |
CAW |
CAY |
105.3 |
106.4 |
Torsion Angles for IRB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAD |
CAO |
OAA |
CAP |
195.1 |
180.1 |
OAA |
CAO |
OAD |
HOAD |
360.0 |
359.9 |
CAH |
CAP |
CAO |
OAA |
168.9 |
180.0 |
CAK |
CAP |
CAO |
OAA |
344.6 |
359.9 |
OAB |
CAR |
NAM |
CAY |
181.5 |
180.0 |
NAM |
CAR |
OAB |
CAU |
175.1 |
180.1 |
OAB |
CAR |
NAM |
HNAM |
1.4 |
359.9 |
OAB |
CAR |
CAU |
CAS |
347.2 |
0.1 |
OAB |
CAR |
CAU |
CAW |
180.8 |
180.0 |
OAC |
NAL |
CAT |
CAS |
199.7 |
180.0 |
OAC |
NAL |
CAT |
CAX |
14.5 |
0.1 |
OAA |
CAO |
OAD |
CAP |
165.5 |
179.9 |
CAH |
CAP |
CAO |
OAD |
335.5 |
360.0 |
CAK |
CAP |
CAO |
OAD |
151.3 |
179.9 |
CAF |
CAG |
CAQ |
BRAE |
178.9 |
180.0 |
CAG |
CAQ |
BRAE |
CAY |
183.2 |
180.1 |
BRAE |
CAQ |
CAG |
HAG |
358.9 |
360.0 |
NAM |
CAY |
CAQ |
BRAE |
2.6 |
0.1 |
BRAE |
CAQ |
CAY |
CAW |
182.2 |
180.0 |
BRAE |
CAQ |
CAG |
CAF |
178.9 |
180.0 |
CAG |
CAF |
CAI |
CAW |
359.3 |
360.0 |
CAI |
CAF |
CAG |
HAF |
180.0 |
180.3 |
CAG |
CAF |
CAI |
HAI |
179.3 |
179.9 |
CAF |
CAG |
CAQ |
CAY |
2.1 |
0.0 |
CAQ |
CAG |
CAF |
HAG |
180.0 |
180.0 |
CAI |
CAF |
CAG |
CAQ |
358.6 |
360.0 |
CAG |
CAF |
CAI |
HAF |
180.0 |
179.7 |
CAI |
CAF |
CAG |
HAG |
178.6 |
180.0 |
CAF |
CAI |
CAW |
CAU |
174.7 |
180.0 |
CAF |
CAI |
CAW |
CAY |
1.9 |
360.0 |
CAW |
CAI |
CAF |
HAI |
180.0 |
180.1 |
BRAE |
CAQ |
CAG |
CAY |
176.8 |
179.9 |
CAQ |
CAG |
CAF |
CAI |
358.6 |
360.0 |
CAQ |
CAG |
CAF |
HAF |
178.6 |
179.7 |
CAF |
CAG |
CAQ |
HAG |
180.0 |
180.0 |
NAM |
CAY |
CAQ |
CAG |
179.5 |
180.0 |
CAG |
CAQ |
CAY |
CAW |
359.1 |
360.0 |
CAJ |
CAH |
CAP |
CAK |
0.0 |
0.1 |
CAJ |
CAH |
CAP |
CAO |
175.8 |
180.0 |
CAP |
CAH |
CAJ |
HAH |
180.0 |
180.2 |
CAH |
CAJ |
CAV |
NAN |
180.5 |
180.0 |
CAH |
CAJ |
CAV |
CAX |
358.6 |
0.1 |
CAV |
CAJ |
CAH |
HAJ |
180.0 |
179.9 |
OAA |
CAO |
CAP |
CAH |
168.9 |
180.0 |
OAD |
CAO |
CAP |
CAH |
335.5 |
360.0 |
CAP |
CAH |
CAJ |
CAV |
0.8 |
359.9 |
CAJ |
CAH |
CAP |
HAH |
180.0 |
179.8 |
CAP |
CAH |
CAJ |
HAJ |
180.8 |
180.0 |
CAH |
CAP |
CAK |
CAX |
359.8 |
359.9 |
CAK |
CAP |
CAH |
CAO |
184.2 |
180.1 |
CAH |
CAP |
CAK |
HAK |
179.8 |
180.0 |
CAW |
CAI |
CAF |
HAF |
179.3 |
180.3 |
CAF |
CAI |
CAW |
HAI |
180.0 |
179.9 |
NAM |
CAY |
CAW |
CAI |
178.5 |
180.0 |
CAQ |
CAY |
CAW |
CAI |
358.9 |
0.0 |
CAR |
CAU |
CAW |
CAI |
181.5 |
180.0 |
CAS |
CAU |
CAW |
CAI |
18.7 |
360.0 |
CAU |
CAW |
CAI |
CAY |
172.8 |
180.0 |
CAV |
CAJ |
CAH |
CAP |
0.8 |
359.9 |
CAV |
CAJ |
CAH |
HAH |
180.8 |
179.7 |
CAH |
CAJ |
CAV |
HAJ |
180.0 |
180.1 |
CAK |
CAX |
CAV |
CAJ |
1.2 |
360.0 |
CAS |
NAN |
CAV |
CAJ |
182.8 |
180.0 |
NAN |
CAV |
CAJ |
CAX |
182.0 |
179.9 |
CAJ |
CAV |
NAN |
HNAN |
2.8 |
0.1 |
CAT |
CAX |
CAV |
CAJ |
181.8 |
179.9 |
OAA |
CAO |
CAP |
CAK |
344.6 |
359.9 |
OAD |
CAO |
CAP |
CAK |
151.3 |
179.9 |
CAH |
CAP |
CAK |
CAO |
175.5 |
179.9 |
CAK |
CAP |
CAH |
HAH |
180.0 |
180.3 |
CAP |
CAK |
CAX |
CAT |
178.9 |
180.1 |
CAP |
CAK |
CAX |
CAV |
359.6 |
0.0 |
CAX |
CAK |
CAP |
HAK |
180.0 |
180.0 |
CAJ |
CAV |
CAX |
CAK |
1.2 |
360.0 |
CAX |
CAK |
CAP |
CAO |
184.3 |
180.0 |
CAP |
CAK |
CAX |
HAK |
180.0 |
180.0 |
NAL |
CAT |
CAX |
CAK |
0.5 |
359.9 |
NAN |
CAV |
CAX |
CAK |
179.6 |
180.0 |
CAS |
CAT |
CAX |
CAK |
176.1 |
180.0 |
CAT |
CAX |
CAK |
CAV |
179.3 |
180.0 |
CAT |
NAL |
OAC |
HOAC |
180.0 |
179.9 |
CAK |
CAX |
CAT |
NAL |
0.5 |
359.9 |
NAN |
CAS |
CAT |
NAL |
182.6 |
180.0 |
NAL |
CAT |
CAS |
CAU |
344.8 |
0.1 |
CAS |
CAT |
NAL |
CAX |
185.3 |
179.9 |
NAL |
CAT |
CAX |
CAV |
179.8 |
180.0 |
OAB |
CAR |
NAM |
CAU |
184.3 |
179.9 |
CAR |
NAM |
CAY |
CAQ |
179.1 |
180.0 |
CAR |
NAM |
CAY |
CAW |
359.4 |
360.0 |
CAY |
NAM |
CAR |
HNAM |
180.0 |
180.1 |
NAM |
CAR |
CAU |
CAS |
171.4 |
180.0 |
NAM |
CAR |
CAU |
CAW |
5.1 |
359.9 |
BRAE |
CAQ |
CAY |
NAM |
2.6 |
0.1 |
CAG |
CAQ |
CAY |
NAM |
179.5 |
180.0 |
CAI |
CAW |
CAY |
NAM |
178.5 |
180.0 |
CAY |
NAM |
CAR |
CAU |
357.1 |
0.0 |
CAR |
NAM |
CAY |
HNAM |
180.0 |
179.9 |
CAQ |
CAY |
NAM |
CAW |
179.6 |
180.0 |
CAU |
CAW |
CAY |
NAM |
3.7 |
360.0 |
CAJ |
CAV |
NAN |
CAS |
182.8 |
180.0 |
NAL |
CAT |
CAS |
NAN |
182.6 |
180.0 |
CAS |
NAN |
CAV |
CAX |
4.6 |
359.9 |
CAV |
NAN |
CAS |
HNAN |
180.0 |
180.1 |
CAR |
CAU |
CAS |
NAN |
6.9 |
348.4 |
CAT |
CAS |
NAN |
CAU |
163.0 |
180.1 |
NAN |
CAS |
CAT |
CAX |
7.3 |
359.9 |
NAN |
CAS |
CAU |
CAW |
168.1 |
168.5 |
CAJ |
CAV |
NAN |
CAX |
178.2 |
180.1 |
NAN |
CAV |
CAJ |
HAJ |
0.5 |
359.9 |
CAK |
CAX |
CAV |
NAN |
179.6 |
180.0 |
CAV |
NAN |
CAS |
CAT |
352.8 |
0.1 |
CAV |
NAN |
CAS |
CAU |
189.8 |
180.0 |
CAS |
NAN |
CAV |
HNAN |
180.0 |
179.9 |
CAT |
CAX |
CAV |
NAN |
0.1 |
0.0 |
OAA |
CAO |
CAP |
OAD |
193.4 |
180.1 |
CAP |
CAO |
OAD |
HOAD |
194.5 |
180.0 |
CAH |
CAP |
CAO |
CAK |
184.3 |
180.1 |
CAO |
CAP |
CAH |
HAH |
355.8 |
0.2 |
CAO |
CAP |
CAK |
CAX |
184.3 |
180.0 |
CAO |
CAP |
CAK |
HAK |
4.3 |
0.1 |
BRAE |
CAQ |
CAY |
CAG |
183.1 |
180.1 |
CAY |
CAQ |
CAG |
HAG |
182.1 |
180.0 |
CAI |
CAW |
CAY |
CAQ |
358.9 |
0.0 |
NAM |
CAY |
CAQ |
CAW |
180.4 |
180.0 |
CAQ |
CAY |
NAM |
HNAM |
359.1 |
0.0 |
CAU |
CAW |
CAY |
CAQ |
184.0 |
180.0 |
OAB |
CAR |
CAU |
NAM |
175.7 |
180.1 |
CAI |
CAW |
CAU |
CAR |
181.5 |
180.0 |
CAU |
CAR |
NAM |
CAY |
357.1 |
0.0 |
CAU |
CAR |
NAM |
HNAM |
177.1 |
180.0 |
NAN |
CAS |
CAU |
CAR |
6.9 |
348.4 |
CAT |
CAS |
CAU |
CAR |
207.7 |
168.3 |
CAS |
CAU |
CAR |
CAW |
166.4 |
180.1 |
CAR |
CAU |
CAW |
CAY |
354.9 |
0.1 |
CAK |
CAX |
CAT |
CAS |
176.1 |
180.0 |
NAL |
CAT |
CAS |
CAX |
175.3 |
180.1 |
CAT |
CAS |
NAN |
CAV |
352.8 |
0.1 |
NAN |
CAS |
CAT |
CAU |
197.8 |
179.9 |
CAT |
CAS |
NAN |
HNAN |
172.8 |
180.0 |
CAR |
CAU |
CAS |
CAT |
207.7 |
168.3 |
CAT |
CAS |
CAU |
CAW |
8.9 |
348.4 |
CAS |
CAT |
CAX |
CAV |
355.4 |
0.1 |
CAI |
CAW |
CAU |
CAS |
18.7 |
360.0 |
CAU |
CAS |
NAN |
CAV |
189.8 |
180.0 |
NAN |
CAS |
CAU |
CAT |
159.2 |
180.1 |
CAU |
CAS |
NAN |
HNAN |
9.8 |
359.9 |
CAR |
CAU |
CAS |
CAW |
198.8 |
179.9 |
CAU |
CAS |
CAT |
CAX |
169.5 |
180.0 |
CAS |
CAU |
CAW |
CAY |
192.1 |
180.0 |
CAJ |
CAV |
CAX |
CAT |
181.8 |
179.9 |
CAK |
CAX |
CAT |
CAV |
180.7 |
180.0 |
CAT |
CAX |
CAK |
HAK |
358.8 |
0.0 |
NAL |
CAT |
CAX |
CAS |
184.4 |
179.9 |
NAN |
CAV |
CAX |
CAT |
0.1 |
0.0 |
CAX |
CAT |
CAS |
CAU |
169.5 |
180.0 |
CAI |
CAW |
CAU |
CAY |
186.5 |
180.0 |
CAU |
CAW |
CAI |
HAI |
354.7 |
0.1 |
NAM |
CAY |
CAW |
CAU |
3.7 |
360.0 |
CAQ |
CAY |
CAW |
CAU |
184.0 |
180.0 |
CAR |
CAU |
CAW |
CAS |
162.8 |
180.1 |
CAJ |
CAV |
CAX |
NAN |
181.6 |
179.9 |
CAX |
CAV |
CAJ |
HAJ |
178.6 |
180.0 |
CAK |
CAX |
CAV |
CAT |
179.5 |
180.0 |
CAV |
CAX |
CAK |
HAK |
179.6 |
180.0 |
CAX |
CAV |
NAN |
HNAN |
184.6 |
180.1 |
CAI |
CAW |
CAY |
CAU |
174.8 |
180.0 |
CAY |
CAW |
CAI |
HAI |
181.9 |
180.1 |
NAM |
CAY |
CAW |
CAQ |
179.7 |
180.0 |
CAW |
CAY |
NAM |
HNAM |
179.4 |
180.1 |
HOAC |
OAC |
NAL |
CAT |
180.0 |
179.9 |
CAG |
CAF |
HAF |
CAI |
180.0 |
180.3 |
HAF |
CAF |
CAG |
CAQ |
178.6 |
179.7 |
HAF |
CAF |
CAG |
HAG |
358.6 |
359.7 |
HAF |
CAF |
CAI |
CAW |
179.3 |
180.3 |
HAF |
CAF |
CAI |
HAI |
359.3 |
0.2 |
HAG |
CAG |
CAF |
CAI |
178.6 |
180.0 |
CAF |
CAG |
HAG |
CAQ |
180.0 |
180.0 |
HAG |
CAG |
CAF |
HAF |
358.6 |
359.7 |
HAG |
CAG |
CAQ |
CAY |
182.1 |
180.0 |
CAJ |
CAH |
HAH |
CAP |
180.0 |
180.2 |
HAH |
CAH |
CAJ |
CAV |
180.8 |
179.7 |
HAH |
CAH |
CAJ |
HAJ |
0.9 |
359.8 |
HAH |
CAH |
CAP |
CAK |
180.0 |
180.3 |
HAH |
CAH |
CAP |
CAO |
355.8 |
0.2 |
CAF |
CAI |
HAI |
CAW |
180.0 |
180.1 |
HAI |
CAI |
CAF |
HAF |
359.3 |
0.2 |
HAI |
CAI |
CAW |
CAU |
354.7 |
0.1 |
HAI |
CAI |
CAW |
CAY |
181.9 |
180.1 |
HAJ |
CAJ |
CAH |
CAP |
180.8 |
180.0 |
CAH |
CAJ |
HAJ |
CAV |
180.0 |
179.9 |
HAJ |
CAJ |
CAH |
HAH |
0.9 |
359.8 |
HAJ |
CAJ |
CAV |
NAN |
0.5 |
359.9 |
HAJ |
CAJ |
CAV |
CAX |
178.6 |
180.0 |
CAP |
CAK |
HAK |
CAX |
180.0 |
180.0 |
HAK |
CAK |
CAP |
CAO |
4.3 |
0.1 |
HAK |
CAK |
CAX |
CAT |
358.8 |
0.0 |
HAK |
CAK |
CAX |
CAV |
179.6 |
180.0 |
CAR |
NAM |
HNAM |
CAY |
180.0 |
180.1 |
HNAM |
NAM |
CAR |
CAU |
177.1 |
180.0 |
HNAM |
NAM |
CAY |
CAQ |
359.1 |
0.0 |
HNAM |
NAM |
CAY |
CAW |
179.4 |
180.1 |
CAS |
NAN |
HNAN |
CAV |
180.0 |
180.1 |
HNAN |
NAN |
CAS |
CAT |
172.8 |
180.0 |
HNAN |
NAN |
CAS |
CAU |
9.8 |
359.9 |
HNAN |
NAN |
CAV |
CAX |
184.6 |
180.1 |
HOAD |
OAD |
CAO |
CAP |
194.5 |
180.0 |