PDB Chemical Component IR6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IR6
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O02 |
S |
1.442 |
1.421 |
C12 |
S |
1.764 |
1.814 |
O03 |
S |
1.436 |
1.421 |
S |
C11 |
1.761 |
1.762 |
C11 |
C10 |
1.386 |
1.380 |
C11 |
C06 |
1.394 |
1.395 |
C10 |
C09 |
1.370 |
1.384 |
C17 |
C18 |
1.387 |
1.381 |
C17 |
C16 |
1.387 |
1.388 |
C18 |
C19 |
1.382 |
1.383 |
C06 |
C05 |
1.460 |
1.481 |
C06 |
C07 |
1.385 |
1.395 |
C05 |
C04 |
1.447 |
1.390 |
C05 |
C13 |
1.412 |
1.411 |
C04 |
C03 |
1.412 |
1.393 |
C09 |
C08 |
1.374 |
1.383 |
C13 |
C14 |
1.421 |
1.399 |
C13 |
N1 |
1.396 |
1.368 |
C01 |
C02 |
1.551 |
1.507 |
C14 |
C15 |
1.350 |
1.382 |
C03 |
N1 |
1.369 |
1.386 |
C03 |
C02 |
1.386 |
1.402 |
N1 |
C1 |
1.370 |
1.364 |
C02 |
O01 |
1.225 |
1.216 |
C15 |
O1 |
1.404 |
1.356 |
C15 |
C22 |
1.382 |
1.407 |
O1 |
C16 |
1.395 |
1.358 |
C1 |
C22 |
1.372 |
1.350 |
C16 |
C21 |
1.386 |
1.388 |
C19 |
C20 |
1.378 |
1.383 |
C07 |
C08 |
1.373 |
1.380 |
C21 |
C20 |
1.397 |
1.381 |
C01 |
H1 |
1.100 |
1.090 |
C01 |
H2 |
1.100 |
1.090 |
C01 |
H3 |
1.101 |
1.090 |
C04 |
H4 |
1.080 |
1.080 |
C07 |
H5 |
1.080 |
1.080 |
C08 |
H6 |
1.080 |
1.080 |
C09 |
H7 |
1.079 |
1.080 |
C10 |
H8 |
1.080 |
1.080 |
C12 |
H9 |
1.100 |
1.090 |
C12 |
H10 |
1.100 |
1.090 |
C12 |
H11 |
1.100 |
1.091 |
C14 |
H12 |
1.080 |
1.081 |
C17 |
H13 |
1.080 |
1.080 |
C18 |
H14 |
1.080 |
1.080 |
C19 |
H15 |
1.080 |
1.080 |
C20 |
H16 |
1.080 |
1.080 |
C21 |
H17 |
1.080 |
1.080 |
C22 |
H18 |
1.080 |
1.080 |
C1 |
H19 |
1.080 |
1.080 |
Bond Angles for IR6
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
C10 |
H8 |
120.6 |
120.0 |
C10 |
C09 |
H7 |
119.8 |
119.8 |
C17 |
C18 |
C19 |
120.5 |
120.1 |
C18 |
C17 |
H13 |
120.3 |
120.0 |
C17 |
C18 |
H14 |
119.7 |
119.9 |
C17 |
C16 |
C21 |
120.6 |
119.8 |
C18 |
C19 |
C20 |
119.9 |
120.1 |
C19 |
C18 |
H14 |
119.8 |
120.0 |
C18 |
C19 |
H15 |
120.1 |
119.9 |
C06 |
C05 |
C13 |
127.8 |
126.3 |
C06 |
C07 |
C08 |
120.3 |
119.8 |
C06 |
C07 |
H5 |
119.8 |
120.1 |
C05 |
C04 |
H4 |
126.8 |
126.2 |
C05 |
C13 |
C14 |
132.0 |
131.8 |
C05 |
C13 |
N1 |
108.5 |
108.2 |
C04 |
C03 |
N1 |
109.6 |
108.4 |
C09 |
C08 |
H6 |
119.6 |
119.9 |
C14 |
C13 |
N1 |
119.5 |
120.1 |
C13 |
C14 |
C15 |
118.0 |
119.2 |
C13 |
C14 |
H12 |
121.0 |
120.4 |
C03 |
N1 |
C13 |
108.9 |
108.4 |
C13 |
N1 |
C1 |
120.2 |
120.4 |
C01 |
C02 |
O01 |
121.3 |
120.0 |
C02 |
C01 |
H1 |
109.5 |
109.4 |
C02 |
C01 |
H2 |
109.5 |
109.5 |
C02 |
C01 |
H3 |
109.5 |
109.5 |
C14 |
C15 |
O1 |
123.5 |
120.4 |
C14 |
C15 |
C22 |
122.6 |
119.2 |
C15 |
C14 |
H12 |
121.0 |
120.4 |
C03 |
N1 |
C1 |
130.7 |
131.2 |
N1 |
C1 |
H19 |
119.9 |
119.6 |
O1 |
C15 |
C22 |
113.9 |
120.4 |
C15 |
O1 |
C16 |
122.2 |
118.0 |
C15 |
C22 |
H18 |
120.2 |
120.0 |
O1 |
C16 |
C21 |
120.5 |
120.1 |
C1 |
C22 |
H18 |
120.2 |
119.9 |
C16 |
C21 |
C20 |
119.1 |
120.0 |
C16 |
C21 |
H17 |
120.4 |
120.0 |
C20 |
C19 |
H15 |
120.1 |
120.0 |
C19 |
C20 |
H16 |
119.8 |
119.9 |
C08 |
C07 |
H5 |
119.8 |
120.1 |
C07 |
C08 |
H6 |
119.7 |
119.9 |
C21 |
C20 |
H16 |
119.8 |
120.0 |
H1 |
C01 |
H2 |
109.5 |
109.5 |
H1 |
C01 |
H3 |
109.4 |
109.4 |
H2 |
C01 |
H3 |
109.4 |
109.5 |
H9 |
C12 |
H10 |
109.5 |
109.5 |
H9 |
C12 |
H11 |
109.5 |
109.5 |
H10 |
C12 |
H11 |
109.4 |
109.5 |
Torsion Angles for IR6
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
S |
C11 |
C10 |
H8 |
359.3 |
359.6 |
C11 |
C10 |
C09 |
H7 |
183.3 |
179.7 |
C11 |
C06 |
C05 |
C13 |
105.5 |
104.1 |
C11 |
C06 |
C07 |
H5 |
174.8 |
180.3 |
C10 |
C09 |
C08 |
H6 |
175.4 |
180.0 |
C18 |
C17 |
C16 |
C21 |
359.1 |
0.3 |
C17 |
C18 |
C19 |
C20 |
0.3 |
0.1 |
C19 |
C18 |
C17 |
H14 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H15 |
180.3 |
180.0 |
O1 |
C16 |
C17 |
C21 |
182.0 |
179.7 |
C17 |
C16 |
C21 |
C20 |
0.1 |
359.4 |
C17 |
C16 |
C21 |
H17 |
180.1 |
179.7 |
C19 |
C18 |
C17 |
H13 |
180.7 |
180.0 |
C17 |
C18 |
C19 |
H14 |
180.0 |
180.0 |
C20 |
C19 |
C18 |
H15 |
180.0 |
180.1 |
C18 |
C19 |
C20 |
H16 |
179.0 |
179.9 |
C06 |
C05 |
C04 |
H4 |
5.4 |
360.0 |
C06 |
C05 |
C13 |
C14 |
352.8 |
0.0 |
C06 |
C05 |
C13 |
N1 |
175.7 |
180.0 |
C07 |
C06 |
C05 |
C13 |
281.2 |
284.3 |
C08 |
C07 |
C06 |
H5 |
180.0 |
180.0 |
C06 |
C07 |
C08 |
H6 |
185.6 |
180.1 |
C05 |
C04 |
C03 |
N1 |
0.4 |
359.9 |
C13 |
C05 |
C04 |
H4 |
177.1 |
180.0 |
C14 |
C13 |
C05 |
N1 |
177.1 |
180.0 |
C05 |
C13 |
C14 |
C15 |
181.3 |
180.0 |
C05 |
C13 |
C14 |
H12 |
1.2 |
359.9 |
C03 |
N1 |
C13 |
C05 |
355.8 |
360.0 |
C05 |
C13 |
N1 |
C1 |
180.8 |
180.0 |
C04 |
C03 |
N1 |
C13 |
2.3 |
0.1 |
C04 |
C03 |
N1 |
C1 |
176.6 |
180.0 |
C09 |
C08 |
C07 |
H5 |
185.5 |
180.0 |
C07 |
C08 |
C09 |
H6 |
180.0 |
180.0 |
C05 |
C13 |
C14 |
N1 |
183.2 |
180.0 |
C03 |
N1 |
C13 |
C14 |
178.3 |
180.0 |
C14 |
C13 |
N1 |
C1 |
3.3 |
0.0 |
C13 |
C14 |
C15 |
O1 |
179.3 |
180.0 |
C13 |
C14 |
C15 |
C22 |
359.8 |
0.0 |
C15 |
C14 |
C13 |
H12 |
180.0 |
180.0 |
C05 |
C13 |
N1 |
C14 |
177.5 |
180.0 |
N1 |
C13 |
C14 |
C15 |
358.1 |
360.0 |
N1 |
C13 |
C14 |
H12 |
178.1 |
179.9 |
C03 |
N1 |
C13 |
C1 |
175.0 |
179.9 |
C13 |
N1 |
C1 |
H19 |
177.4 |
180.0 |
H1 |
C01 |
C02 |
H2 |
240.0 |
240.0 |
H1 |
C01 |
C02 |
H3 |
120.0 |
119.9 |
H2 |
C01 |
C02 |
H3 |
240.0 |
239.9 |
C15 |
C14 |
C13 |
N1 |
358.1 |
360.0 |
C13 |
C14 |
C15 |
H12 |
180.0 |
180.0 |
O1 |
C15 |
C14 |
C22 |
179.5 |
180.0 |
C14 |
C15 |
O1 |
C16 |
16.4 |
112.8 |
C14 |
C15 |
C22 |
H18 |
181.0 |
179.9 |
C05 |
C13 |
N1 |
C03 |
355.8 |
360.0 |
C14 |
C13 |
N1 |
C03 |
178.3 |
180.0 |
C13 |
N1 |
C03 |
C1 |
185.7 |
180.1 |
C03 |
N1 |
C1 |
H19 |
3.7 |
0.1 |
C03 |
C02 |
C01 |
H1 |
180.7 |
180.0 |
C03 |
C02 |
C01 |
H2 |
300.7 |
300.0 |
C03 |
C02 |
C01 |
H3 |
60.7 |
60.0 |
C03 |
N1 |
C1 |
C13 |
186.3 |
180.1 |
N1 |
C1 |
C22 |
H18 |
180.4 |
180.1 |
O01 |
C02 |
C01 |
H1 |
360.0 |
359.9 |
O01 |
C02 |
C01 |
H2 |
120.0 |
120.0 |
O01 |
C02 |
C01 |
H3 |
240.0 |
240.0 |
C14 |
C15 |
O1 |
C22 |
180.5 |
180.0 |
O1 |
C15 |
C14 |
H12 |
359.3 |
0.0 |
O1 |
C15 |
C22 |
H18 |
1.4 |
359.9 |
C15 |
O1 |
C16 |
C21 |
69.1 |
184.2 |
C14 |
C15 |
C22 |
O1 |
179.5 |
180.0 |
C22 |
C15 |
C14 |
H12 |
179.8 |
180.0 |
C22 |
C15 |
O1 |
C16 |
196.0 |
292.8 |
C1 |
C22 |
C15 |
H18 |
180.0 |
180.1 |
C17 |
C16 |
O1 |
C21 |
178.0 |
180.3 |
C16 |
O1 |
C15 |
C22 |
196.0 |
292.8 |
O1 |
C16 |
C21 |
C20 |
178.1 |
179.7 |
O1 |
C16 |
C21 |
H17 |
358.1 |
0.0 |
C13 |
N1 |
C1 |
C22 |
357.4 |
360.0 |
C03 |
N1 |
C1 |
C22 |
183.7 |
180.1 |
C15 |
C22 |
C1 |
H18 |
180.0 |
179.9 |
C16 |
C21 |
C20 |
H16 |
180.8 |
180.3 |
C20 |
C19 |
C18 |
H14 |
180.3 |
180.1 |
C18 |
C19 |
C20 |
H15 |
180.0 |
179.9 |
C16 |
C21 |
C20 |
C19 |
0.9 |
0.7 |
C21 |
C20 |
C19 |
H16 |
180.0 |
179.7 |
C06 |
C07 |
C08 |
H5 |
180.0 |
180.0 |
C09 |
C08 |
C07 |
H6 |
180.0 |
180.0 |
C16 |
C21 |
C20 |
H17 |
180.0 |
180.3 |
C21 |
C20 |
C19 |
H15 |
179.0 |
179.7 |
C19 |
C20 |
C21 |
H16 |
180.0 |
180.3 |
H1 |
C01 |
C02 |
O01 |
360.0 |
359.9 |
C02 |
C01 |
H1 |
H2 |
120.0 |
120.0 |
C02 |
C01 |
H1 |
H3 |
240.0 |
240.1 |
H2 |
C01 |
H1 |
H3 |
120.0 |
120.0 |
H2 |
C01 |
C02 |
O01 |
120.0 |
120.0 |
C02 |
C01 |
H2 |
H1 |
239.9 |
240.0 |
C02 |
C01 |
H2 |
H3 |
120.0 |
120.0 |
H1 |
C01 |
H2 |
H3 |
240.0 |
240.0 |
H3 |
C01 |
C02 |
O01 |
240.0 |
240.0 |
C02 |
C01 |
H3 |
H1 |
120.0 |
119.9 |
C02 |
C01 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
C01 |
H3 |
H2 |
120.0 |
120.0 |
H4 |
C04 |
C03 |
N1 |
180.4 |
180.0 |
C06 |
C07 |
H5 |
C08 |
180.0 |
180.0 |
H5 |
C07 |
C08 |
H6 |
5.5 |
0.1 |
H6 |
C08 |
C07 |
H5 |
5.5 |
0.1 |
H7 |
C09 |
C08 |
H6 |
355.5 |
359.9 |
H8 |
C10 |
C09 |
H7 |
3.2 |
0.0 |
H10 |
C12 |
H9 |
H11 |
120.0 |
120.0 |
H9 |
C12 |
H10 |
H11 |
240.0 |
240.0 |
H9 |
C12 |
H11 |
H10 |
120.0 |
120.0 |
H12 |
C14 |
C13 |
N1 |
178.1 |
179.9 |
C13 |
C14 |
H12 |
C15 |
180.0 |
180.0 |
H12 |
C14 |
C15 |
O1 |
359.3 |
0.0 |
H12 |
C14 |
C15 |
C22 |
179.8 |
180.0 |
H13 |
C17 |
C18 |
C19 |
180.7 |
180.0 |
H13 |
C17 |
C18 |
H14 |
0.6 |
360.0 |
H13 |
C17 |
C16 |
C21 |
179.1 |
180.3 |
C17 |
C18 |
H14 |
C19 |
180.0 |
180.0 |
H14 |
C18 |
C17 |
H13 |
0.6 |
360.0 |
H14 |
C18 |
C19 |
C20 |
180.3 |
180.1 |
H14 |
C18 |
C19 |
H15 |
0.3 |
0.0 |
C18 |
C19 |
H15 |
C20 |
180.0 |
180.1 |
H15 |
C19 |
C18 |
H14 |
0.3 |
0.0 |
H15 |
C19 |
C20 |
H16 |
359.0 |
0.0 |
H16 |
C20 |
C19 |
H15 |
359.0 |
0.0 |
C16 |
C21 |
H17 |
C20 |
180.0 |
179.7 |
H17 |
C21 |
C20 |
H16 |
0.8 |
0.0 |
H19 |
C1 |
C22 |
H18 |
0.5 |
0.1 |