PDB Chemical Component IP6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IP6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.393 1.418
N1 HN11 1.000 0.997
N1 HN12 1.000 0.996
C2 N3 1.332 1.353
C2 C7 1.407 1.396
N3 C4 1.324 1.352
C4 C5 1.383 1.385
C4 H4 1.080 1.085
C5 C6 1.389 1.390
C5 H5 1.080 1.083
C6 C7 1.398 1.401
C6 H6 1.080 1.087
C7 N8 1.415 1.387
N8 C9 1.477 1.441
N8 HN8 0.999 1.015
C9 C10 1.522 1.492
C9 H91 1.100 1.099
C9 H92 1.100 1.098
C10 C15 1.403 1.395
C10 C11 1.397 1.395
C11 C12 1.385 1.395
C11 H11 1.080 1.087
C12 C13 1.396 1.395
C12 H12 1.080 1.086
C13 C14 1.405 1.395
C13 H13 1.080 1.088
C14 C16 1.485 1.448
C14 C15 1.404 1.394
C15 H15 1.080 1.088
C16 C24 1.406 1.398
C16 C17 1.415 1.392
C17 C18 1.377 1.400
C17 H17 1.080 1.089
C18 C19 1.413 1.409
C18 H18 1.080 1.086
C19 C20 1.477 1.422
C19 C23 1.427 1.397
C20 C21 1.355 1.376
C20 H20 1.080 1.081
C21 N22 1.373 1.369
C21 H21 1.080 1.081
N22 C23 1.400 1.376
N22 HN22 1.000 1.011
C23 C24 1.414 1.399
C24 H24 1.080 1.087

Bond Angles for IP6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 HN11 109.5 118.8
C2 N1 HN12 109.5 118.8
N1 C2 N3 119.7 117.6
N1 C2 C7 119.9 117.6
HN11 N1 HN12 109.5 122.1
N3 C2 C7 120.4 124.8
C2 N3 C4 121.9 116.3
C2 C7 C6 118.0 116.5
C2 C7 N8 120.6 123.0
N3 C4 C5 121.3 124.1
N3 C4 H4 119.4 115.1
C5 C4 H4 119.4 120.8
C4 C5 C6 118.7 117.9
C4 C5 H5 120.6 121.1
C6 C5 H5 120.7 121.0
C5 C6 C7 119.7 120.5
C5 C6 H6 120.1 119.6
C7 C6 H6 120.2 120.0
C6 C7 N8 121.3 120.6
C7 N8 C9 121.3 123.8
C7 N8 HN8 105.7 118.0
C9 N8 HN8 105.7 118.2
N8 C9 C10 109.7 112.3
N8 C9 H91 109.4 107.5
N8 C9 H92 109.3 107.3
C10 C9 H91 109.4 111.1
C10 C9 H92 109.3 111.6
C9 C10 C15 120.9 120.1
C9 C10 C11 118.5 119.9
H91 C9 H92 109.7 106.8
C11 C10 C15 120.7 120.0
C10 C15 C14 119.8 120.0
C10 C15 H15 120.1 119.7
C10 C11 C12 119.6 120.0
C10 C11 H11 120.2 120.5
C12 C11 H11 120.2 119.5
C11 C12 C13 120.3 120.0
C11 C12 H12 119.8 120.0
C13 C12 H12 119.8 120.0
C12 C13 C14 120.7 120.0
C12 C13 H13 119.6 119.1
C14 C13 H13 119.6 120.9
C13 C14 C16 119.1 119.9
C13 C14 C15 118.8 120.1
C15 C14 C16 122.0 120.0
C14 C16 C24 119.8 119.3
C14 C16 C17 120.1 119.6
C14 C15 H15 120.1 120.4
C17 C16 C24 120.0 121.0
C16 C24 C23 120.3 117.6
C16 C24 H24 119.8 121.8
C16 C17 C18 120.4 120.8
C16 C17 H17 119.8 120.6
C18 C17 H17 119.8 118.6
C17 C18 C19 120.4 119.2
C17 C18 H18 119.8 120.0
C19 C18 H18 119.8 120.8
C18 C19 C20 134.7 134.2
C18 C19 C23 120.1 118.7
C20 C19 C23 105.2 107.1
C19 C20 C21 108.0 107.7
C19 C20 H20 126.0 126.9
C19 C23 N22 107.3 107.1
C19 C23 C24 118.7 122.7
C21 C20 H20 126.0 125.3
C20 C21 N22 109.7 107.9
C20 C21 H21 125.1 131.5
N22 C21 H21 125.1 120.6
C21 N22 C23 109.8 110.2
C21 N22 HN22 125.1 125.0
C23 N22 HN22 125.0 124.8
N22 C23 C24 134.0 130.3
C23 C24 H24 119.9 120.7

Torsion Angles for IP6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HN11 N1 C2 HN12 240.0 173.8
N3 C2 N1 C7 180.2 180.1
N1 C2 N3 C4 179.6 180.0
N1 C2 C7 C6 180.5 180.0
N1 C2 C7 N8 0.1 0.1
C2 N1 HN11 HN12 120.0 186.4
HN11 N1 C2 N3 149.4 104.9
HN11 N1 C2 C7 329.1 284.8
C2 N1 HN12 HN11 239.9 173.6
HN12 N1 C2 N3 269.4 291.1
HN12 N1 C2 C7 89.2 111.0
N3 C2 N1 HN11 149.4 104.9
N3 C2 N1 HN12 269.4 291.1
N1 C2 N3 C7 179.8 179.9
N3 C2 C7 C6 0.2 360.0
N3 C2 C7 N8 179.9 180.1
C2 N3 C4 C5 0.0 0.0
C2 N3 C4 H4 180.0 179.9
C7 C2 N1 HN11 329.1 284.8
C7 C2 N1 HN12 89.2 111.0
N1 C2 C7 N3 180.3 180.1
C7 C2 N3 C4 359.9 0.0
C5 C6 C7 C2 359.7 0.0
C2 C7 C6 H6 179.7 179.9
C6 C7 C2 N8 180.3 179.9
C2 C7 N8 C9 185.5 179.9
C2 C7 N8 HN8 305.5 360.0
C4 N3 C2 C7 359.9 0.0
C5 C4 N3 H4 180.0 180.1
N3 C4 C5 C6 359.9 360.0
N3 C4 C5 H5 179.9 180.0
N3 C4 C5 H4 180.0 179.9
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 C7 0.2 0.0
C4 C5 C6 H6 180.2 180.1
N3 C4 H4 C5 180.0 180.1
H4 C4 C5 C6 179.9 180.0
H4 C4 C5 H5 359.9 0.1
C2 C7 C6 C5 359.7 0.0
C6 C5 C4 H4 179.9 180.0
C4 C5 C6 H5 180.0 180.1
C7 C6 C5 H6 180.0 179.9
C5 C6 C7 N8 180.0 179.9
H5 C5 C4 H4 359.9 0.1
C4 C5 H5 C6 180.0 179.9
H5 C5 C6 C7 180.2 180.0
H5 C5 C6 H6 0.3 0.1
C2 C7 C6 N8 179.7 180.1
C7 C6 C5 H5 180.2 180.0
C5 C6 C7 H6 180.0 180.1
C6 C7 N8 C9 5.1 0.0
C6 C7 N8 HN8 125.1 180.1
H6 C6 C5 H5 0.3 0.1
C5 C6 H6 C7 180.0 179.9
H6 C6 C7 N8 0.0 359.8
C2 C7 N8 C6 180.3 179.9
N8 C7 C6 H6 0.0 359.8
C9 N8 C7 HN8 240.0 180.0
C7 N8 C9 C10 80.0 182.5
C7 N8 C9 H91 200.0 60.0
C7 N8 C9 H92 320.1 305.4
C7 N8 C9 HN8 120.0 180.0
C10 C9 N8 H91 240.0 122.5
C10 C9 N8 H92 119.9 237.0
N8 C9 C10 C15 42.1 270.0
N8 C9 C10 C11 222.7 90.0
H91 C9 N8 H92 239.9 114.6
C7 N8 HN8 C9 230.2 180.0
HN8 N8 C9 C10 320.0 2.4
HN8 N8 C9 H91 80.0 240.0
HN8 N8 C9 H92 200.1 125.4
C10 C9 N8 HN8 320.0 2.4
N8 C9 C10 H91 120.0 239.6
N8 C9 C10 H92 240.1 120.5
H91 C9 C10 H92 120.1 240.9
C11 C10 C9 C15 180.6 180.0
C9 C10 C15 C14 179.7 180.0
C9 C10 C15 H15 359.7 0.0
C9 C10 C11 C12 179.6 180.0
C9 C10 C11 H11 359.6 360.0
H91 C9 N8 HN8 80.0 240.0
N8 C9 H91 C10 239.8 123.2
N8 C9 H91 H92 119.9 245.1
C10 C9 H91 H92 240.1 121.9
H91 C9 C10 C15 282.1 30.4
H91 C9 C10 C11 102.7 210.4
H92 C9 N8 HN8 200.1 125.4
N8 C9 H92 C10 120.1 236.6
N8 C9 H92 H91 240.1 115.0
C10 C9 H92 H91 120.0 238.4
H92 C9 C10 C15 162.0 149.4
H92 C9 C10 C11 342.6 329.5
C15 C10 C9 H91 282.1 30.4
C15 C10 C9 H92 162.0 149.4
C9 C10 C15 C11 180.6 180.0
C15 C10 C11 C12 0.2 0.0
C15 C10 C11 H11 180.2 180.0
C13 C14 C15 C10 1.5 0.1
C10 C15 C14 C16 179.5 180.0
C14 C15 C10 H15 180.0 180.0
C11 C10 C9 H91 102.7 210.4
C11 C10 C9 H92 342.6 329.5
C9 C10 C11 C15 179.4 180.0
C11 C10 C15 C14 359.1 360.0
C11 C10 C15 H15 179.1 180.0
C12 C11 C10 H11 180.0 180.0
C10 C11 C12 C13 359.8 -0.0
C10 C11 C12 H12 179.8 180.0
C12 C11 C10 C15 0.2 0.0
C10 C11 C12 H11 180.0 180.0
C13 C12 C11 H12 180.0 180.0
C11 C12 C13 C14 0.8 0.0
C11 C12 C13 H13 180.8 180.0
H11 C11 C10 C15 180.2 180.0
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 179.9 180.0
H11 C11 C12 H12 359.8 360.0
C13 C12 C11 H11 179.9 180.0
C11 C12 C13 H12 180.0 180.0
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 C16 180.5 180.0
C12 C13 C14 C15 358.5 359.9
H12 C12 C11 H11 359.8 360.0
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 C14 180.8 180.1
H12 C12 C13 H13 0.8 0.1
C10 C15 C14 C13 1.5 0.1
C14 C13 C12 H12 180.8 180.1
C12 C13 C14 H13 180.0 180.0
C15 C14 C13 C16 178.0 179.9
C13 C14 C16 C24 144.1 210.0
C13 C14 C16 C17 326.8 30.0
C13 C14 C15 H15 181.5 180.0
H13 C13 C12 H12 0.8 0.1
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 C16 0.6 360.0
H13 C13 C14 C15 178.5 179.9
C16 C14 C13 H13 0.6 360.0
C13 C14 C16 C15 177.9 179.9
C16 C14 C15 H15 359.4 360.0
C17 C16 C14 C24 182.6 180.0
C14 C16 C24 C23 181.0 180.0
C14 C16 C24 H24 1.0 360.0
C14 C16 C17 C18 178.9 180.0
C14 C16 C17 H17 358.9 0.1
C10 C15 C14 H15 180.0 180.0
C15 C14 C13 H13 178.5 179.9
C13 C14 C15 C16 182.1 180.1
C15 C14 C16 C24 326.2 30.0
C15 C14 C16 C17 148.9 210.0
C10 C15 H15 C14 180.0 180.0
H15 C15 C14 C16 359.4 360.0
C14 C16 C24 C17 182.6 180.0
C24 C16 C17 C18 1.6 0.0
C24 C16 C17 H17 181.6 180.1
C19 C23 C24 C16 0.5 360.0
N22 C23 C24 C16 181.3 180.0
C23 C24 C16 H24 180.0 180.1
C14 C16 C17 C24 177.3 180.0
C17 C16 C24 C23 358.4 0.0
C17 C16 C24 H24 178.4 180.0
C18 C17 C16 H17 180.0 179.9
C16 C17 C18 C19 359.6 360.0
C16 C17 C18 H18 179.6 180.1
C18 C17 C16 C24 1.6 0.0
C16 C17 C18 H17 180.0 180.1
C19 C18 C17 H18 180.0 179.9
C17 C18 C19 C20 179.8 180.0
C17 C18 C19 C23 359.3 0.0
H17 C17 C16 C24 181.6 180.1
C16 C17 H17 C18 180.0 179.9
H17 C17 C18 C19 179.6 179.9
H17 C17 C18 H18 359.6 0.0
C19 C18 C17 H17 179.6 179.9
C17 C18 C19 H18 180.0 180.1
C20 C19 C18 C23 180.6 180.0
C18 C19 C20 C21 179.5 180.0
C18 C19 C20 H20 359.5 359.9
C18 C19 C23 N22 180.0 180.0
C18 C19 C23 C24 0.7 0.0
H18 C18 C17 H17 359.6 0.0
C17 C18 H18 C19 180.0 179.9
H18 C18 C19 C20 359.8 359.9
H18 C18 C19 C23 179.3 179.9
C20 C19 C18 H18 359.8 359.9
C18 C19 C20 C23 179.5 180.0
C20 C19 C23 N22 359.6 0.0
C20 C19 C23 C24 180.3 180.0
C21 C20 C19 H20 180.0 180.1
C19 C20 C21 N22 0.4 0.0
C19 C20 C21 H21 180.4 179.9
C16 C24 C23 C19 0.5 360.0
C23 C19 C18 H18 179.3 179.9
C18 C19 C23 C20 180.4 180.0
C23 C19 C20 C21 360.0 360.0
C23 C19 C20 H20 180.0 179.9
C21 N22 C23 C19 0.6 360.0
C19 C23 N22 HN22 180.6 180.0
N22 C23 C19 C24 179.4 180.0
C19 C23 C24 H24 180.5 180.0
C21 C20 C19 C23 360.0 360.0
C19 C20 C21 H20 180.0 179.9
N22 C21 C20 H21 180.0 180.1
C20 C21 N22 C23 359.3 360.0
C20 C21 N22 HN22 179.3 180.0
H20 C20 C19 C23 180.0 179.9
C19 C20 H20 C21 180.0 180.2
H20 C20 C21 N22 180.4 180.1
H20 C20 C21 H21 0.4 0.1
C19 C23 N22 C21 0.6 360.0
N22 C21 C20 H20 180.4 180.1
C20 C21 N22 H21 180.0 179.9
C23 N22 C21 HN22 180.0 180.0
C21 N22 C23 C24 179.9 180.0
H21 C21 C20 H20 0.4 0.1
C20 C21 H21 N22 180.0 180.1
H21 C21 N22 C23 179.4 180.1
H21 C21 N22 HN22 359.3 0.1
C16 C24 C23 N22 181.3 180.0
C19 C23 N22 C24 180.8 180.0
C23 N22 C21 H21 179.4 180.1
C21 N22 C23 HN22 180.0 180.0
N22 C23 C24 H24 1.3 0.0
HN22 N22 C21 H21 359.3 0.1
C21 N22 HN22 C23 180.0 180.0
HN22 N22 C23 C24 359.9 0.0
C16 C24 C23 H24 180.0 180.0
C19 C23 C24 N22 179.2 180.0
C24 C23 N22 HN22 359.9 0.0
C16 C24 H24 C23 180.0 180.1