PDB Chemical Component IOC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IOC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C01 |
C02 |
1.403 |
1.380 |
C01 |
C06 |
1.412 |
1.395 |
C01 |
H011 |
1.103 |
1.080 |
C02 |
C03 |
1.460 |
1.382 |
C02 |
H021 |
1.103 |
1.081 |
C03 |
C04 |
1.401 |
1.384 |
C03 |
S11 |
1.793 |
1.762 |
C04 |
C05 |
1.412 |
1.379 |
C04 |
H041 |
1.103 |
1.080 |
C05 |
C06 |
1.398 |
1.395 |
C05 |
H051 |
1.103 |
1.081 |
C06 |
C07 |
1.498 |
1.478 |
C07 |
O08 |
1.258 |
1.216 |
C07 |
N09 |
1.457 |
1.348 |
N09 |
C10 |
1.439 |
1.465 |
N09 |
H091 |
1.020 |
0.970 |
C10 |
C15 |
1.408 |
1.507 |
C10 |
H101 |
1.116 |
1.089 |
C10 |
H102 |
1.116 |
1.089 |
S11 |
NP2 |
1.713 |
1.656 |
S11 |
O13 |
1.487 |
1.420 |
S11 |
O14 |
1.504 |
1.421 |
NP2 |
HP21 |
1.020 |
0.970 |
NP2 |
HP22 |
1.020 |
0.970 |
C15 |
C16 |
1.490 |
1.383 |
C15 |
C20 |
1.494 |
1.383 |
C16 |
C17 |
1.482 |
1.386 |
C16 |
F22 |
1.232 |
1.351 |
C17 |
C18 |
1.488 |
1.385 |
C17 |
F23 |
1.365 |
1.351 |
C18 |
C19 |
1.463 |
1.384 |
C18 |
F21 |
1.235 |
1.350 |
C19 |
C20 |
1.448 |
1.382 |
C19 |
H191 |
1.103 |
1.080 |
C20 |
H201 |
1.103 |
1.080 |
Bond Angles for IOC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C02 |
C01 |
C06 |
120.9 |
119.8 |
C02 |
C01 |
H011 |
119.3 |
120.1 |
C01 |
C02 |
C03 |
119.0 |
120.2 |
C01 |
C02 |
H021 |
118.6 |
119.9 |
C06 |
C01 |
H011 |
119.9 |
120.1 |
C01 |
C06 |
C05 |
119.8 |
119.7 |
C01 |
C06 |
C07 |
118.4 |
120.1 |
C03 |
C02 |
H021 |
122.5 |
119.9 |
C02 |
C03 |
C04 |
119.2 |
120.3 |
C02 |
C03 |
S11 |
118.0 |
119.9 |
C04 |
C03 |
S11 |
122.7 |
119.9 |
C03 |
C04 |
C05 |
120.3 |
120.1 |
C03 |
C04 |
H041 |
119.5 |
119.9 |
C03 |
S11 |
NP2 |
116.1 |
107.4 |
C03 |
S11 |
O13 |
97.1 |
105.8 |
C03 |
S11 |
O14 |
99.8 |
105.8 |
C05 |
C04 |
H041 |
120.3 |
119.9 |
C04 |
C05 |
C06 |
120.9 |
119.9 |
C04 |
C05 |
H051 |
120.1 |
120.1 |
C06 |
C05 |
H051 |
119.0 |
120.1 |
C05 |
C06 |
C07 |
121.9 |
120.1 |
C06 |
C07 |
O08 |
116.1 |
120.0 |
C06 |
C07 |
N09 |
122.6 |
120.0 |
O08 |
C07 |
N09 |
121.3 |
120.0 |
C07 |
N09 |
C10 |
117.3 |
120.0 |
C07 |
N09 |
H091 |
121.9 |
120.0 |
C10 |
N09 |
H091 |
120.8 |
120.0 |
N09 |
C10 |
C15 |
121.8 |
109.5 |
N09 |
C10 |
H101 |
107.8 |
109.5 |
N09 |
C10 |
H102 |
107.8 |
109.4 |
C15 |
C10 |
H101 |
107.9 |
109.6 |
C15 |
C10 |
H102 |
107.8 |
109.5 |
C10 |
C15 |
C16 |
120.0 |
120.1 |
C10 |
C15 |
C20 |
118.6 |
119.9 |
H101 |
C10 |
H102 |
102.0 |
109.4 |
NP2 |
S11 |
O13 |
118.4 |
105.8 |
NP2 |
S11 |
O14 |
113.6 |
105.7 |
S11 |
NP2 |
HP21 |
116.1 |
120.0 |
S11 |
NP2 |
HP22 |
109.8 |
119.9 |
O13 |
S11 |
O14 |
109.1 |
125.4 |
HP21 |
NP2 |
HP22 |
109.8 |
120.1 |
C16 |
C15 |
C20 |
121.4 |
120.0 |
C15 |
C16 |
C17 |
117.1 |
120.0 |
C15 |
C16 |
F22 |
122.4 |
120.0 |
C15 |
C20 |
C19 |
119.9 |
120.1 |
C15 |
C20 |
H201 |
121.5 |
120.0 |
C17 |
C16 |
F22 |
120.5 |
120.0 |
C16 |
C17 |
C18 |
121.1 |
119.9 |
C16 |
C17 |
F23 |
119.1 |
120.0 |
C18 |
C17 |
F23 |
119.8 |
120.0 |
C17 |
C18 |
C19 |
120.4 |
119.9 |
C17 |
C18 |
F21 |
120.0 |
120.1 |
C19 |
C18 |
F21 |
119.7 |
120.0 |
C18 |
C19 |
C20 |
120.1 |
120.0 |
C18 |
C19 |
H191 |
120.5 |
120.0 |
C20 |
C19 |
H191 |
119.4 |
120.0 |
C19 |
C20 |
H201 |
118.5 |
119.9 |
Torsion Angles for IOC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C06 |
C01 |
C02 |
H011 |
180.0 |
180.0 |
C02 |
C01 |
C06 |
C05 |
359.8 |
360.0 |
C02 |
C01 |
C06 |
C07 |
179.8 |
180.0 |
C03 |
C02 |
C01 |
H021 |
180.0 |
180.0 |
C01 |
C02 |
C03 |
C04 |
0.2 |
0.2 |
C01 |
C02 |
C03 |
S11 |
180.6 |
180.0 |
C02 |
C01 |
C06 |
H011 |
180.0 |
180.0 |
C06 |
C01 |
C02 |
C03 |
359.9 |
0.0 |
C06 |
C01 |
C02 |
H021 |
180.0 |
180.0 |
C04 |
C05 |
C06 |
C01 |
0.2 |
359.8 |
C01 |
C06 |
C05 |
H051 |
180.2 |
180.0 |
C05 |
C06 |
C01 |
C07 |
180.0 |
180.0 |
C01 |
C06 |
C07 |
O08 |
180.5 |
360.0 |
C01 |
C06 |
C07 |
N09 |
0.5 |
180.0 |
C02 |
C01 |
H011 |
C06 |
180.0 |
180.0 |
H011 |
C01 |
C02 |
C03 |
179.9 |
180.0 |
H011 |
C01 |
C02 |
H021 |
359.9 |
360.0 |
H011 |
C01 |
C06 |
C05 |
179.9 |
180.0 |
H011 |
C01 |
C06 |
C07 |
359.9 |
0.0 |
C03 |
C02 |
C01 |
C06 |
359.9 |
0.0 |
C03 |
C02 |
C01 |
H011 |
179.9 |
180.0 |
C01 |
C02 |
C03 |
H021 |
180.0 |
180.0 |
C04 |
C03 |
C02 |
S11 |
179.6 |
180.2 |
C02 |
C03 |
C04 |
C05 |
359.8 |
359.5 |
C02 |
C03 |
C04 |
H041 |
179.9 |
180.1 |
C02 |
C03 |
S11 |
NP2 |
305.4 |
90.0 |
C02 |
C03 |
S11 |
O13 |
178.9 |
337.4 |
C02 |
C03 |
S11 |
O14 |
68.0 |
202.5 |
H021 |
C02 |
C01 |
C06 |
180.0 |
180.0 |
H021 |
C02 |
C01 |
H011 |
359.9 |
360.0 |
C01 |
C02 |
H021 |
C03 |
180.0 |
180.0 |
H021 |
C02 |
C03 |
C04 |
180.2 |
180.2 |
H021 |
C02 |
C03 |
S11 |
0.6 |
360.0 |
C04 |
C03 |
C02 |
H021 |
180.2 |
180.2 |
C02 |
C03 |
C04 |
S11 |
180.4 |
179.8 |
C04 |
C03 |
S11 |
NP2 |
125.8 |
269.7 |
C04 |
C03 |
S11 |
O13 |
359.3 |
157.1 |
C04 |
C03 |
S11 |
O14 |
248.4 |
22.3 |
C05 |
C04 |
C03 |
H041 |
179.9 |
179.4 |
C03 |
C04 |
C05 |
C06 |
359.9 |
0.5 |
C03 |
C04 |
C05 |
H051 |
180.0 |
180.3 |
S11 |
C03 |
C02 |
H021 |
0.6 |
360.0 |
C02 |
C03 |
S11 |
C04 |
179.6 |
180.2 |
S11 |
C03 |
C04 |
C05 |
179.4 |
179.7 |
S11 |
C03 |
C04 |
H041 |
359.5 |
0.3 |
NP2 |
S11 |
C03 |
O13 |
126.5 |
112.6 |
NP2 |
S11 |
C03 |
O14 |
237.4 |
247.5 |
C03 |
S11 |
NP2 |
HP21 |
180.0 |
180.0 |
C03 |
S11 |
NP2 |
HP22 |
54.8 |
359.7 |
O13 |
S11 |
C03 |
O14 |
110.9 |
134.9 |
C01 |
C06 |
C05 |
C04 |
0.2 |
359.8 |
C05 |
C04 |
C03 |
S11 |
179.4 |
179.7 |
C03 |
C04 |
C05 |
H041 |
180.1 |
180.6 |
C06 |
C05 |
C04 |
H051 |
180.0 |
180.2 |
C04 |
C05 |
C06 |
C07 |
180.3 |
179.8 |
H041 |
C04 |
C03 |
S11 |
359.5 |
0.3 |
C03 |
C04 |
H041 |
C05 |
179.9 |
179.4 |
H041 |
C04 |
C05 |
C06 |
179.9 |
179.9 |
H041 |
C04 |
C05 |
H051 |
359.9 |
359.7 |
C05 |
C06 |
C01 |
H011 |
179.9 |
180.0 |
C01 |
C06 |
C05 |
C07 |
180.0 |
180.0 |
C06 |
C05 |
C04 |
H041 |
179.9 |
179.9 |
C04 |
C05 |
C06 |
H051 |
180.0 |
179.8 |
C05 |
C06 |
C07 |
O08 |
0.5 |
180.0 |
C05 |
C06 |
C07 |
N09 |
180.5 |
359.9 |
H051 |
C05 |
C04 |
H041 |
359.9 |
359.7 |
C04 |
C05 |
H051 |
C06 |
180.0 |
180.2 |
H051 |
C05 |
C06 |
C07 |
0.2 |
360.0 |
C07 |
C06 |
C01 |
H011 |
359.9 |
0.0 |
C01 |
C06 |
C07 |
C05 |
180.0 |
180.0 |
C07 |
C06 |
C05 |
H051 |
0.2 |
360.0 |
O08 |
C07 |
C06 |
N09 |
180.0 |
180.0 |
C06 |
C07 |
N09 |
C10 |
155.5 |
180.0 |
C06 |
C07 |
N09 |
H091 |
335.5 |
0.1 |
C06 |
C07 |
O08 |
N09 |
180.0 |
180.0 |
O08 |
C07 |
N09 |
C10 |
335.6 |
359.9 |
O08 |
C07 |
N09 |
H091 |
155.5 |
180.0 |
C06 |
C07 |
N09 |
O08 |
180.0 |
180.0 |
C10 |
N09 |
C07 |
H091 |
180.0 |
179.9 |
C07 |
N09 |
C10 |
C15 |
275.2 |
180.0 |
C07 |
N09 |
C10 |
H101 |
40.5 |
300.1 |
C07 |
N09 |
C10 |
H102 |
149.9 |
60.0 |
C07 |
N09 |
C10 |
H091 |
180.0 |
180.1 |
C15 |
C10 |
N09 |
H101 |
234.7 |
239.9 |
C15 |
C10 |
N09 |
H102 |
125.3 |
120.0 |
N09 |
C10 |
C15 |
C16 |
75.3 |
299.8 |
N09 |
C10 |
C15 |
C20 |
255.1 |
120.0 |
H101 |
C10 |
N09 |
H102 |
250.6 |
240.1 |
C07 |
N09 |
H091 |
C10 |
180.0 |
179.9 |
H091 |
N09 |
C10 |
C15 |
95.2 |
359.9 |
H091 |
N09 |
C10 |
H101 |
220.5 |
120.0 |
H091 |
N09 |
C10 |
H102 |
329.9 |
239.9 |
C15 |
C10 |
N09 |
H091 |
95.2 |
359.9 |
N09 |
C10 |
C15 |
H101 |
125.3 |
120.1 |
N09 |
C10 |
C15 |
H102 |
234.7 |
240.1 |
H101 |
C10 |
C15 |
H102 |
109.4 |
120.0 |
C16 |
C15 |
C10 |
C20 |
180.2 |
179.8 |
C10 |
C15 |
C16 |
C17 |
179.5 |
179.7 |
C10 |
C15 |
C16 |
F22 |
359.8 |
0.2 |
C10 |
C15 |
C20 |
C19 |
180.5 |
180.0 |
C10 |
C15 |
C20 |
H201 |
0.4 |
0.0 |
H101 |
C10 |
N09 |
H091 |
220.5 |
120.0 |
N09 |
C10 |
H101 |
C15 |
226.8 |
239.9 |
N09 |
C10 |
H101 |
H102 |
113.3 |
119.9 |
C15 |
C10 |
H101 |
H102 |
246.6 |
240.0 |
H101 |
C10 |
C15 |
C16 |
310.0 |
179.7 |
H101 |
C10 |
C15 |
C20 |
129.8 |
359.9 |
H102 |
C10 |
N09 |
H091 |
329.9 |
239.9 |
N09 |
C10 |
H102 |
C15 |
133.2 |
120.0 |
N09 |
C10 |
H102 |
H101 |
246.7 |
240.0 |
C15 |
C10 |
H102 |
H101 |
113.4 |
120.1 |
H102 |
C10 |
C15 |
C16 |
200.5 |
59.8 |
H102 |
C10 |
C15 |
C20 |
20.3 |
240.0 |
C03 |
S11 |
NP2 |
O13 |
245.0 |
247.4 |
C03 |
S11 |
NP2 |
O14 |
115.0 |
112.6 |
O13 |
S11 |
NP2 |
O14 |
229.9 |
225.2 |
HP21 |
NP2 |
S11 |
HP22 |
125.3 |
180.3 |
C03 |
S11 |
O13 |
NP2 |
124.9 |
113.8 |
C03 |
S11 |
O13 |
O14 |
257.0 |
236.8 |
NP2 |
S11 |
O13 |
O14 |
132.1 |
123.1 |
O13 |
S11 |
NP2 |
HP21 |
295.0 |
292.6 |
O13 |
S11 |
NP2 |
HP22 |
169.7 |
112.3 |
C03 |
S11 |
O14 |
NP2 |
235.7 |
246.3 |
C03 |
S11 |
O14 |
O13 |
101.1 |
123.2 |
NP2 |
S11 |
O14 |
O13 |
225.4 |
236.9 |
O14 |
S11 |
NP2 |
HP21 |
65.0 |
67.4 |
O14 |
S11 |
NP2 |
HP22 |
299.8 |
247.1 |
HP21 |
NP2 |
S11 |
O13 |
295.0 |
292.6 |
HP21 |
NP2 |
S11 |
O14 |
65.0 |
67.4 |
S11 |
NP2 |
HP21 |
HP22 |
234.8 |
179.7 |
HP22 |
NP2 |
S11 |
O13 |
169.7 |
112.3 |
HP22 |
NP2 |
S11 |
O14 |
299.8 |
247.1 |
S11 |
NP2 |
HP22 |
HP21 |
128.8 |
180.3 |
C16 |
C15 |
C10 |
H101 |
310.0 |
179.7 |
C16 |
C15 |
C10 |
H102 |
200.5 |
59.8 |
C10 |
C15 |
C16 |
C20 |
179.8 |
180.2 |
C16 |
C15 |
C20 |
C19 |
0.3 |
0.3 |
C16 |
C15 |
C20 |
H201 |
180.2 |
180.2 |
C17 |
C16 |
C15 |
F22 |
179.7 |
179.5 |
C15 |
C16 |
C17 |
C18 |
0.1 |
0.5 |
C15 |
C16 |
C17 |
F23 |
180.0 |
180.3 |
C20 |
C15 |
C10 |
H101 |
129.8 |
359.9 |
C20 |
C15 |
C10 |
H102 |
20.3 |
240.0 |
C10 |
C15 |
C20 |
C16 |
180.2 |
179.8 |
C20 |
C15 |
C16 |
C17 |
359.7 |
359.5 |
C20 |
C15 |
C16 |
F22 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
C15 |
359.9 |
360.0 |
C15 |
C20 |
C19 |
H191 |
179.9 |
180.0 |
C19 |
C20 |
C15 |
H201 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
C20 |
359.7 |
359.5 |
C15 |
C16 |
C17 |
F22 |
180.3 |
180.5 |
C18 |
C17 |
C16 |
F23 |
180.1 |
180.3 |
C16 |
C17 |
C18 |
C19 |
0.0 |
359.7 |
C16 |
C17 |
C18 |
F21 |
180.2 |
179.7 |
F22 |
C16 |
C15 |
C20 |
180.0 |
180.0 |
C15 |
C16 |
F22 |
C17 |
179.7 |
179.5 |
F22 |
C16 |
C17 |
C18 |
179.9 |
180.1 |
F22 |
C16 |
C17 |
F23 |
359.8 |
359.8 |
C18 |
C17 |
C16 |
F22 |
179.9 |
180.1 |
C16 |
C17 |
C18 |
F23 |
179.9 |
179.7 |
C19 |
C18 |
C17 |
F21 |
179.8 |
180.0 |
C17 |
C18 |
C19 |
C20 |
360.0 |
0.0 |
C17 |
C18 |
C19 |
H191 |
180.0 |
180.0 |
F23 |
C17 |
C16 |
F22 |
359.8 |
359.8 |
C16 |
C17 |
F23 |
C18 |
180.1 |
180.3 |
F23 |
C17 |
C18 |
C19 |
180.1 |
180.0 |
F23 |
C17 |
C18 |
F21 |
0.3 |
360.0 |
C15 |
C20 |
C19 |
C18 |
359.9 |
360.0 |
C19 |
C18 |
C17 |
F23 |
180.1 |
180.0 |
C17 |
C18 |
C19 |
F21 |
180.2 |
180.0 |
C20 |
C19 |
C18 |
H191 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
H201 |
179.9 |
180.0 |
F21 |
C18 |
C17 |
F23 |
0.3 |
360.0 |
C17 |
C18 |
F21 |
C19 |
179.8 |
180.0 |
F21 |
C18 |
C19 |
C20 |
179.8 |
180.0 |
F21 |
C18 |
C19 |
H191 |
359.8 |
0.0 |
C15 |
C20 |
C19 |
H201 |
180.0 |
180.0 |
C20 |
C19 |
C18 |
F21 |
179.8 |
180.0 |
C18 |
C19 |
C20 |
H191 |
180.0 |
180.0 |
H191 |
C19 |
C18 |
F21 |
359.8 |
0.0 |
C18 |
C19 |
H191 |
C20 |
180.0 |
180.0 |
H191 |
C19 |
C20 |
H201 |
359.9 |
360.0 |
C15 |
C20 |
H201 |
C19 |
180.0 |
180.0 |
H201 |
C20 |
C19 |
H191 |
359.9 |
360.0 |