PDB Chemical Component INL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for INL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S1 O2 1.395 1.420
S1 O3 1.385 1.421
S1 N4 1.453 1.656
S1 C5 1.594 1.762
N4 HN41 1.020 0.970
N4 HN42 1.019 0.969
C5 C6 1.420 1.354
C5 S9 1.516 1.788
C6 C7 1.432 1.399
C6 H61 1.103 1.080
C7 C8 1.460 1.381
C7 C10 1.457 1.491
C8 S9 1.493 1.756
C8 S13 1.496 1.749
C10 C11 1.551 1.322
C10 H101 1.103 1.079
C11 N12 1.531 1.389
C11 C16 1.499 1.507
N12 S13 1.495 1.675
N12 C24 1.450 1.396
S13 O14 1.388 1.420
S13 O15 1.370 1.421
C16 N22 1.624 1.469
C16 H161 1.115 1.090
C16 H162 1.116 1.090
C17 C18 1.553 1.529
C17 N22 1.547 1.469
C17 H171 1.116 1.090
C17 H172 1.115 1.090
C18 O19 1.558 1.428
C18 H181 1.115 1.090
C18 H182 1.114 1.089
O19 C20 1.530 1.427
C20 C21 1.522 1.529
C20 H201 1.114 1.090
C20 H202 1.115 1.090
C21 N22 1.596 1.468
C21 H211 1.115 1.090
C21 H212 1.115 1.089
C23 C24 1.431 1.388
C23 C28 1.415 1.386
C23 H231 1.102 1.079
C24 C25 1.450 1.390
C25 C26 1.462 1.382
C25 H251 1.103 1.080
C26 C27 1.485 1.382
C26 H261 1.104 1.081
C27 C28 1.480 1.387
C27 H271 1.104 1.080
C28 O29 1.354 1.359
O29 C30 1.667 1.428
C30 H301 1.115 1.089
C30 H302 1.115 1.090
C30 H303 1.115 1.090

Bond Angles for INL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 S1 O3 109.2 125.4
O2 S1 N4 108.1 105.8
O2 S1 C5 109.4 105.8
O3 S1 N4 111.7 105.7
O3 S1 C5 110.1 105.8
N4 S1 C5 108.2 107.3
S1 N4 HN41 108.1 120.0
S1 N4 HN42 112.8 120.0
S1 C5 C6 123.7 128.8
S1 C5 S9 130.2 128.9
HN41 N4 HN42 112.8 120.0
C6 C5 S9 106.1 102.3
C5 C6 C7 110.5 120.0
C5 C6 H61 124.5 120.0
C5 S9 C8 108.1 97.6
C7 C6 H61 125.1 120.0
C6 C7 C8 110.3 115.3
C6 C7 C10 131.8 126.7
C8 C7 C10 117.9 118.0
C7 C8 S9 105.1 104.7
C7 C8 S13 120.8 123.2
C7 C10 C11 125.7 122.9
C7 C10 H101 113.7 118.5
S9 C8 S13 133.3 132.1
C8 S13 N12 119.4 102.9
C8 S13 O14 109.8 106.5
C8 S13 O15 108.4 106.4
C11 C10 H101 120.6 118.5
C10 C11 N12 112.8 126.3
C10 C11 C16 128.4 116.8
N12 C11 C16 118.6 116.9
C11 N12 S13 120.9 117.8
C11 N12 C24 107.5 121.1
C11 C16 N22 92.2 109.4
C11 C16 H161 119.0 109.5
C11 C16 H162 119.0 109.5
S13 N12 C24 111.0 121.1
N12 S13 O14 100.6 106.5
N12 S13 O15 109.3 106.3
N12 C24 C23 120.2 120.1
N12 C24 C25 120.4 120.0
O14 S13 O15 108.8 126.1
N22 C16 H161 119.1 109.5
N22 C16 H162 119.1 109.5
C16 N22 C17 113.6 106.7
C16 N22 C21 112.5 106.7
H161 C16 H162 91.0 109.5
C18 C17 N22 110.5 109.5
C18 C17 H171 111.8 109.5
C18 C17 H172 111.8 109.4
C17 C18 O19 111.4 109.7
C17 C18 H181 111.5 109.4
C17 C18 H182 111.5 109.5
N22 C17 H171 111.8 109.5
N22 C17 H172 111.8 109.5
C17 N22 C21 112.4 106.7
H171 C17 H172 98.5 109.4
O19 C18 H181 111.5 109.4
O19 C18 H182 111.5 109.5
C18 O19 C20 113.9 107.1
H181 C18 H182 98.9 109.4
O19 C20 C21 114.1 109.7
O19 C20 H201 110.5 109.4
O19 C20 H202 110.5 109.4
C21 C20 H201 110.5 109.5
C21 C20 H202 110.5 109.5
C20 C21 N22 111.4 109.5
C20 C21 H211 111.5 109.4
C20 C21 H212 111.6 109.5
H201 C20 H202 99.9 109.4
N22 C21 H211 111.5 109.5
N22 C21 H212 111.5 109.5
H211 C21 H212 98.9 109.5
C24 C23 C28 125.0 119.9
C24 C23 H231 118.1 120.0
C23 C24 C25 119.3 119.9
C28 C23 H231 116.9 120.0
C23 C28 C27 112.4 119.9
C23 C28 O29 124.7 120.0
C24 C25 C26 123.2 120.0
C24 C25 H251 118.0 120.0
C26 C25 H251 118.8 119.9
C25 C26 C27 111.6 120.1
C25 C26 H261 123.5 119.9
C27 C26 H261 124.9 119.9
C26 C27 C28 128.5 120.1
C26 C27 H271 115.9 119.9
C28 C27 H271 115.6 119.9
C27 C28 O29 122.9 120.0
C28 O29 C30 125.5 106.8
O29 C30 H301 125.5 109.5
O29 C30 H302 106.6 109.5
O29 C30 H303 106.5 109.4
H301 C30 H302 106.6 109.5
H301 C30 H303 106.5 109.4
H302 C30 H303 103.0 109.5

Torsion Angles for INL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 S1 O2 N4 121.8 123.1
O3 S1 O2 C5 239.3 236.8
N4 S1 O2 C5 117.6 113.7
O2 S1 N4 HN41 180.1 67.4
O2 S1 N4 HN42 54.7 247.4
O2 S1 C5 C6 77.7 202.6
O2 S1 C5 S9 256.2 22.5
O2 S1 O3 N4 240.4 236.9
O2 S1 O3 C5 120.2 123.2
N4 S1 O3 C5 239.8 246.3
O3 S1 N4 HN41 59.8 292.5
O3 S1 N4 HN42 294.5 112.6
O3 S1 C5 C6 197.8 337.5
O3 S1 C5 S9 16.3 157.4
O2 S1 N4 O3 120.2 134.8
O2 S1 N4 C5 241.6 247.4
O3 S1 N4 C5 121.4 112.6
N4 S1 C5 C6 320.2 90.0
N4 S1 C5 S9 138.6 269.9
HN41 N4 S1 HN42 125.3 179.9
O2 S1 C5 O3 239.9 225.1
O2 S1 C5 N4 117.5 112.6
O3 S1 C5 N4 237.6 247.5
C5 S1 N4 HN41 298.4 180.0
C5 S1 N4 HN42 173.1 0.0
C6 C5 S1 S9 181.6 180.1
S1 C5 C6 C7 178.6 180.3
S1 C5 C6 H61 358.6 0.3
S1 C5 S9 C8 181.7 180.2
HN41 N4 S1 C5 298.4 180.0
S1 N4 HN41 HN42 234.7 180.1
HN42 N4 S1 C5 173.1 0.0
S1 N4 HN42 HN41 122.8 179.9
S1 C5 C6 S9 178.7 179.9
C6 C5 S9 C8 0.3 0.1
C7 C6 C5 H61 180.0 180.0
C5 C6 C7 C8 359.9 359.1
C5 C6 C7 C10 177.7 179.9
S1 C5 S9 C6 181.4 180.1
S9 C5 C6 C7 359.8 0.4
S9 C5 C6 H61 179.9 180.4
C7 C8 S9 C5 359.6 359.5
C5 S9 C8 S13 189.9 179.4
C7 C6 C5 S9 359.8 0.4
C5 C6 C7 H61 180.0 180.0
C8 C7 C6 C10 182.2 179.1
C6 C7 C8 S9 0.3 0.9
C6 C7 C8 S13 171.6 180.9
C6 C7 C10 C11 179.1 191.5
C6 C7 C10 H101 359.1 11.5
H61 C6 C5 S9 179.9 180.4
C5 C6 H61 C7 180.0 180.0
H61 C6 C7 C8 179.9 179.1
H61 C6 C7 C10 357.7 359.9
C5 S9 C8 C7 359.6 359.5
C8 C7 C6 H61 179.9 179.1
C6 C7 C8 C10 178.1 180.8
C8 C7 C10 C11 356.7 12.3
C8 C7 C10 H101 176.8 192.3
S9 C8 C7 S13 188.7 180.0
C7 C8 S13 N12 17.2 339.7
C7 C8 S13 O14 262.0 228.0
C7 C8 S13 O15 143.3 91.3
C10 C7 C6 H61 357.7 359.9
C6 C7 C10 C8 182.4 179.1
C10 C7 C8 S9 182.1 180.1
C10 C7 C8 S13 353.5 0.1
C11 C10 C7 H101 180.0 180.0
C7 C10 C11 N12 2.1 2.4
C7 C10 C11 C16 185.9 182.5
S9 C8 C7 C10 182.1 180.1
C7 C8 S9 S13 169.8 180.0
S9 C8 S13 N12 185.7 159.8
S9 C8 S13 O14 70.5 48.0
S9 C8 S13 O15 311.8 271.4
S13 C8 C7 C10 353.5 0.1
C7 C8 S13 S9 191.5 180.0
C11 N12 S13 C8 341.6 32.7
C8 S13 N12 C24 109.0 212.9
N12 S13 C8 O14 115.3 111.8
N12 S13 C8 O15 234.0 248.4
O14 S13 C8 O15 118.7 136.6
C7 C10 C11 H101 180.0 180.0
N12 C11 C10 C16 176.2 179.9
C10 C11 N12 S13 8.7 331.9
C10 C11 N12 C24 239.9 151.7
C10 C11 C16 N22 222.4 246.7
C10 C11 C16 H161 347.7 6.6
C10 C11 C16 H162 97.1 126.7
C7 C10 H101 C11 180.0 180.0
H101 C10 C11 N12 182.1 182.4
H101 C10 C11 C16 5.9 2.5
C8 S13 N12 C11 341.6 32.7
N12 C11 C10 H101 182.1 182.4
C10 C11 N12 C16 183.4 180.1
N12 C11 C16 N22 46.4 66.8
N12 C11 C16 H161 171.7 186.7
N12 C11 C16 H162 281.1 306.8
S13 N12 C11 C24 128.9 180.2
C11 N12 S13 O14 101.6 144.4
C11 N12 S13 O15 216.0 281.0
C11 N12 C24 C23 216.0 90.3
C11 N12 C24 C25 39.8 270.1
C16 C11 C10 H101 5.9 2.5
C10 C11 C16 N12 176.0 179.9
C16 C11 N12 S13 185.3 151.8
C16 C11 N12 C24 56.5 331.6
N22 C16 C11 H161 234.7 240.0
N22 C16 C11 H162 125.3 120.0
C11 C16 N22 C17 181.9 176.1
C11 C16 N22 C21 52.7 62.4
H161 C16 C11 H162 250.6 239.9
C8 S13 N12 O14 240.0 248.2
C8 S13 N12 O15 125.6 111.7
S13 N12 C11 C16 185.3 151.8
C11 N12 S13 C24 232.7 179.8
S13 N12 C24 C23 81.7 270.1
S13 N12 C24 C25 265.5 89.9
O14 S13 N12 O15 245.6 223.4
C24 N12 C11 C16 56.5 331.6
C11 N12 C24 S13 134.3 180.2
C24 N12 S13 O14 229.0 324.6
C24 N12 S13 O15 343.3 101.2
N12 C24 C23 C28 185.3 180.4
N12 C24 C23 H231 5.4 359.8
C23 C24 N12 C25 176.2 180.2
N12 C24 C25 C26 176.7 179.9
N12 C24 C25 H251 356.7 359.9
C8 S13 O14 N12 126.7 109.2
C8 S13 O14 O15 241.5 234.6
O14 S13 N12 C24 229.0 324.6
N12 S13 O14 O15 114.8 125.3
C8 S13 O15 N12 228.3 250.8
C8 S13 O15 O14 119.3 125.4
O15 S13 N12 C24 343.3 101.2
N12 S13 O15 O14 251.0 234.6
C11 C16 N22 H161 125.3 120.0
C11 C16 N22 H162 234.7 240.0
H161 C16 N22 H162 109.5 120.1
C18 C17 N22 C16 175.4 186.9
C16 N22 C17 H171 50.2 307.0
C16 N22 C17 H172 300.7 66.9
C17 N22 C16 C21 129.1 113.7
C20 C21 N22 C16 182.1 173.1
C16 N22 C21 H211 56.8 293.0
C16 N22 C21 H212 307.4 53.0
C11 C16 H161 N22 248.9 240.1
C11 C16 H161 H162 124.4 120.0
N22 C16 H161 H162 235.5 240.0
H161 C16 N22 C17 56.6 56.2
H161 C16 N22 C21 287.5 302.5
C11 C16 H162 N22 111.1 120.0
C11 C16 H162 H161 235.6 240.0
N22 C16 H162 H161 124.5 120.0
H162 C16 N22 C17 307.2 296.1
H162 C16 N22 C21 178.0 182.4
C16 N22 C17 C18 175.4 186.9
N22 C17 C18 H171 234.7 120.1
N22 C17 C18 H172 125.3 240.0
C18 C17 N22 C21 304.6 300.6
H171 C17 C18 H172 250.6 119.9
O19 C18 C17 H181 234.7 240.0
O19 C18 C17 H182 125.3 120.2
C17 C18 O19 C20 307.9 296.8
H181 C18 C17 H182 250.6 240.1
C17 N22 C16 H161 56.6 56.2
C17 N22 C16 H162 307.2 296.1
C16 N22 C17 C21 230.8 246.3
C18 C17 N22 H171 125.3 239.9
C18 C17 N22 H172 234.7 120.0
N22 C17 C18 O19 54.7 63.0
N22 C17 C18 H181 180.0 182.9
N22 C17 C18 H182 289.4 302.8
H171 C17 N22 H172 109.4 240.0
C20 C21 N22 C17 52.4 59.3
C17 N22 C21 H211 287.1 179.3
C17 N22 C21 H212 177.7 299.3
C18 C17 H171 N22 235.4 120.1
C18 C17 H171 H172 117.7 240.1
H171 C17 C18 O19 179.9 302.9
H171 C17 C18 H181 305.2 62.8
H171 C17 C18 H182 54.6 182.7
N22 C17 H171 H172 242.3 120.0
H171 C17 N22 C21 179.3 60.7
C18 C17 H172 N22 124.6 240.0
C18 C17 H172 H171 242.3 120.0
H172 C17 C18 O19 289.4 182.9
H172 C17 C18 H181 54.7 302.9
H172 C17 C18 H182 164.1 62.8
N22 C17 H172 H171 117.7 240.0
H172 C17 N22 C21 69.9 180.6
O19 C18 C17 N22 54.7 63.0
O19 C18 C17 H171 179.9 302.9
O19 C18 C17 H172 289.4 182.9
C17 C18 O19 H181 125.3 120.0
C17 C18 O19 H182 234.7 239.9
H181 C18 O19 H182 109.5 119.9
C18 O19 C20 C21 50.0 63.2
C18 O19 C20 H201 175.2 183.3
C18 O19 C20 H202 284.8 303.0
H181 C18 C17 N22 180.0 182.9
H181 C18 C17 H171 305.2 62.8
H181 C18 C17 H172 54.7 302.9
C17 C18 H181 O19 234.8 239.8
C17 C18 H181 H182 117.3 119.9
O19 C18 H181 H182 242.6 240.1
H181 C18 O19 C20 182.6 176.8
H182 C18 C17 N22 289.4 302.8
H182 C18 C17 H171 54.6 182.7
H182 C18 C17 H172 164.1 62.8
C17 C18 H182 O19 125.2 120.3
C17 C18 H182 H181 242.7 240.1
O19 C18 H182 H181 117.4 119.9
H182 C18 O19 C20 73.1 57.0
C20 O19 C18 H181 182.6 176.8
C20 O19 C18 H182 73.1 57.0
C21 C20 O19 H201 234.8 239.9
C21 C20 O19 H202 125.2 120.1
O19 C20 C21 N22 311.1 297.1
O19 C20 C21 H211 76.4 177.1
O19 C20 C21 H212 185.9 57.2
H201 C20 O19 H202 250.4 240.3
C16 N22 C21 C20 182.1 173.1
C17 N22 C21 C20 52.4 59.3
O19 C20 C21 H201 125.2 120.1
O19 C20 C21 H202 234.8 240.0
H201 C20 C21 H202 109.6 119.9
N22 C21 C20 H211 234.7 120.0
N22 C21 C20 H212 125.3 239.9
H211 C21 C20 H212 250.5 119.9
O19 C20 H201 C21 232.8 239.7
O19 C20 H201 H202 116.4 119.8
C21 C20 H201 H202 243.6 240.0
H201 C20 C21 N22 185.9 177.0
H201 C20 C21 H211 311.1 57.0
H201 C20 C21 H212 60.6 297.1
O19 C20 H202 C21 127.2 120.3
O19 C20 H202 H201 243.6 240.2
C21 C20 H202 H201 116.4 119.9
H202 C20 C21 N22 76.3 57.1
H202 C20 C21 H211 201.6 297.2
H202 C20 C21 H212 311.1 177.2
C21 N22 C16 H161 287.5 302.5
C21 N22 C16 H162 178.0 182.4
C16 N22 C21 C17 129.7 113.7
C21 N22 C17 H171 179.3 60.7
C21 N22 C17 H172 69.9 180.6
N22 C21 C20 H201 185.9 177.0
N22 C21 C20 H202 76.3 57.1
C20 C21 N22 H211 125.3 240.1
C20 C21 N22 H212 234.7 120.0
H211 C21 N22 H212 109.4 240.0
H211 C21 C20 H201 311.1 57.0
H211 C21 C20 H202 201.6 297.2
C20 C21 H211 N22 234.8 120.0
C20 C21 H211 H212 117.5 240.1
N22 C21 H211 H212 242.6 120.1
H212 C21 C20 H201 60.6 297.1
H212 C21 C20 H202 311.1 177.2
C20 C21 H212 N22 125.2 239.9
C20 C21 H212 H211 242.6 119.9
N22 C21 H212 H211 117.4 240.0
N12 C24 C23 C25 183.7 179.8
C28 C23 C24 H231 180.0 180.6
C24 C23 C28 C27 356.5 359.4
C24 C23 C28 O29 177.7 179.7
C23 C24 C25 C26 0.5 359.8
C23 C24 C25 H251 180.5 179.7
C24 C23 C28 H231 180.0 179.4
C28 C23 C24 C25 1.6 0.5
C26 C27 C28 C23 4.1 0.3
C23 C28 C27 H271 184.1 180.3
C27 C28 C23 O29 178.8 179.7
C23 C28 O29 C30 18.2 179.7
C24 C23 H231 C28 180.0 180.6
H231 C23 C24 C25 181.6 180.0
H231 C23 C28 C27 176.4 180.0
H231 C23 C28 O29 357.6 0.3
N12 C24 C25 C23 176.2 180.2
C25 C24 C23 C28 1.6 0.5
C25 C24 C23 H231 181.6 180.0
C26 C25 C24 H251 180.0 180.0
C24 C25 C26 C27 359.9 360.0
C24 C25 C26 H261 179.9 180.0
C24 C25 C26 H251 180.0 180.0
C27 C26 C25 H261 180.0 180.0
C25 C26 C27 C28 357.7 0.0
C25 C26 C27 H271 177.6 180.0
C24 C25 H251 C26 180.0 180.0
H251 C25 C26 C27 179.9 180.0
H251 C25 C26 H261 359.9 0.0
C23 C28 C27 C26 4.1 0.3
C27 C26 C25 H251 179.9 180.0
C25 C26 C27 H261 180.0 180.0
C28 C27 C26 H271 180.0 180.0
C26 C27 C28 O29 182.9 180.0
H261 C26 C25 H251 359.9 0.0
C25 C26 H261 C27 180.0 180.0
H261 C26 C27 C28 177.7 180.0
H261 C26 C27 H271 357.7 360.0
C27 C28 C23 H231 176.4 180.0
C23 C28 C27 O29 181.2 180.3
C28 C27 C26 H261 177.7 180.0
C26 C27 C28 H271 180.0 180.0
C27 C28 O29 C30 199.5 360.0
H271 C27 C26 H261 357.7 360.0
C26 C27 H271 C28 180.0 180.0
H271 C27 C28 O29 2.9 360.0
O29 C28 C23 H231 357.6 0.3
C23 C28 O29 C27 178.7 179.7
O29 C28 C27 H271 2.9 360.0
C28 O29 C30 H301 180.0 180.0
C28 O29 C30 H302 305.3 300.1
C28 O29 C30 H303 54.8 60.0
H301 C30 O29 H302 234.7 239.9
H301 C30 O29 H303 125.2 120.0
H302 C30 O29 H303 250.5 240.0
O29 C30 H301 H302 125.3 120.0
O29 C30 H301 H303 234.8 240.0
H302 C30 H301 H303 109.5 120.0
O29 C30 H302 H301 223.9 239.9
O29 C30 H302 H303 111.9 120.0
H301 C30 H302 H303 248.0 240.0
O29 C30 H303 H301 136.1 120.0
O29 C30 H303 H302 248.1 240.0
H301 C30 H303 H302 112.0 120.0