PDB Chemical Component IMT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IMT
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.379 |
1.350 |
| N |
HN2 |
1.020 |
1.030 |
| N |
H |
1.020 |
1.031 |
| CA |
NB1 |
1.412 |
1.373 |
| CA |
CB |
1.399 |
1.375 |
| NB1 |
CG1 |
1.395 |
1.315 |
| CB |
NG2 |
1.406 |
1.367 |
| CB |
HB |
1.103 |
1.082 |
| CG1 |
NG2 |
1.420 |
1.367 |
| CG1 |
C |
1.474 |
1.428 |
| NG2 |
CD |
1.482 |
1.443 |
| CD |
HD1 |
1.115 |
1.093 |
| CD |
HD2 |
1.114 |
1.093 |
| CD |
HD3 |
1.114 |
1.095 |
| C |
O |
1.230 |
1.252 |
| C |
OXT |
|
1.371 |
| OXT |
HXT |
|
0.981 |
Bond Angles for IMT
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
HN2 |
128.0 |
122.1 |
| CA |
N |
H |
105.8 |
122.1 |
| N |
CA |
NB1 |
128.0 |
123.1 |
| N |
CA |
CB |
125.3 |
125.8 |
| HN2 |
N |
H |
105.8 |
115.5 |
| NB1 |
CA |
CB |
106.7 |
111.2 |
| CA |
NB1 |
CG1 |
108.8 |
104.7 |
| CA |
CB |
NG2 |
109.7 |
104.8 |
| CA |
CB |
HB |
124.9 |
132.8 |
| NB1 |
CG1 |
NG2 |
108.2 |
111.8 |
| NB1 |
CG1 |
C |
131.3 |
122.1 |
| NG2 |
CB |
HB |
125.4 |
122.4 |
| CB |
NG2 |
CG1 |
106.5 |
107.5 |
| CB |
NG2 |
CD |
122.4 |
125.8 |
| NG2 |
CG1 |
C |
120.5 |
126.1 |
| CG1 |
NG2 |
CD |
131.1 |
126.7 |
| CG1 |
C |
O |
114.2 |
126.4 |
| CG1 |
C |
OXT |
|
113.5 |
| NG2 |
CD |
HD1 |
122.4 |
108.1 |
| NG2 |
CD |
HD2 |
107.6 |
109.4 |
| NG2 |
CD |
HD3 |
107.6 |
109.3 |
| HD1 |
CD |
HD2 |
107.6 |
110.5 |
| HD1 |
CD |
HD3 |
107.6 |
110.5 |
| HD2 |
CD |
HD3 |
102.3 |
109.1 |
| O |
C |
OXT |
|
120.1 |
| C |
OXT |
HXT |
|
114.1 |
Torsion Angles for IMT
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| HN2 |
N |
CA |
H |
125.4 |
173.8 |
| NB1 |
CA |
N |
CB |
178.7 |
179.9 |
| N |
CA |
NB1 |
CG1 |
181.4 |
180.1 |
| N |
CA |
CB |
NG2 |
178.8 |
179.9 |
| N |
CA |
CB |
HB |
358.7 |
360.0 |
| CA |
N |
HN2 |
H |
234.6 |
185.9 |
| HN2 |
N |
CA |
NB1 |
180.0 |
286.2 |
| HN2 |
N |
CA |
CB |
1.4 |
106.3 |
| CA |
N |
H |
HN2 |
138.1 |
174.1 |
| H |
N |
CA |
NB1 |
54.7 |
112.5 |
| H |
N |
CA |
CB |
236.0 |
292.5 |
| NB1 |
CA |
N |
HN2 |
180.0 |
286.2 |
| NB1 |
CA |
N |
H |
54.7 |
112.5 |
| N |
CA |
NB1 |
CB |
181.1 |
180.1 |
| NB1 |
CA |
CB |
NG2 |
359.9 |
359.9 |
| NB1 |
CA |
CB |
HB |
179.8 |
180.0 |
| CA |
NB1 |
CG1 |
NG2 |
359.8 |
0.0 |
| CA |
NB1 |
CG1 |
C |
179.7 |
179.9 |
| CB |
CA |
N |
HN2 |
1.4 |
106.3 |
| CB |
CA |
N |
H |
236.0 |
292.5 |
| N |
CA |
CB |
NB1 |
178.9 |
179.9 |
| CB |
CA |
NB1 |
CG1 |
0.2 |
0.0 |
| NG2 |
CB |
CA |
HB |
180.0 |
179.9 |
| CA |
CB |
NG2 |
CG1 |
0.0 |
0.1 |
| CA |
CB |
NG2 |
CD |
180.1 |
180.1 |
| CG1 |
NB1 |
CA |
CB |
0.2 |
0.0 |
| CB |
NG2 |
CG1 |
NB1 |
0.1 |
359.9 |
| NG2 |
CG1 |
NB1 |
C |
180.1 |
180.1 |
| NB1 |
CG1 |
NG2 |
CD |
180.1 |
179.9 |
| NB1 |
CG1 |
C |
O |
177.7 |
179.9 |
| NB1 |
CG1 |
C |
OXT |
|
359.9 |
| CA |
CB |
NG2 |
HB |
180.0 |
180.1 |
| NB1 |
CG1 |
NG2 |
CB |
0.1 |
359.9 |
| CB |
NG2 |
CG1 |
C |
180.2 |
180.0 |
| CG1 |
NG2 |
CB |
CD |
179.9 |
179.9 |
| CB |
NG2 |
CD |
HD1 |
180.0 |
251.6 |
| CB |
NG2 |
CD |
HD2 |
305.2 |
12.0 |
| CB |
NG2 |
CD |
HD3 |
54.8 |
131.3 |
| CA |
CB |
HB |
NG2 |
180.0 |
179.9 |
| HB |
CB |
NG2 |
CG1 |
180.0 |
180.0 |
| HB |
CB |
NG2 |
CD |
0.1 |
0.0 |
| NB1 |
CG1 |
NG2 |
C |
179.9 |
179.9 |
| CG1 |
NG2 |
CB |
HB |
180.0 |
180.0 |
| CB |
NG2 |
CG1 |
CD |
180.1 |
180.1 |
| NG2 |
CG1 |
C |
O |
357.6 |
359.8 |
| NG2 |
CG1 |
C |
OXT |
|
179.8 |
| CG1 |
NG2 |
CD |
HD1 |
0.1 |
71.7 |
| CG1 |
NG2 |
CD |
HD2 |
125.3 |
192.0 |
| CG1 |
NG2 |
CD |
HD3 |
234.8 |
311.4 |
| NB1 |
CG1 |
C |
NG2 |
180.1 |
180.1 |
| C |
CG1 |
NG2 |
CD |
0.2 |
360.0 |
| O |
C |
CG1 |
OXT |
|
180.0 |
| CG1 |
C |
OXT |
HXT |
|
180.0 |
| CD |
NG2 |
CB |
HB |
0.1 |
0.0 |
| CB |
NG2 |
CD |
CG1 |
179.9 |
179.9 |
| CD |
NG2 |
CG1 |
C |
0.2 |
360.0 |
| HD1 |
CD |
NG2 |
HD2 |
234.8 |
239.7 |
| HD1 |
CD |
NG2 |
HD3 |
125.3 |
120.3 |
| HD2 |
CD |
NG2 |
HD3 |
250.5 |
240.6 |
| NG2 |
CD |
HD1 |
HD2 |
125.2 |
119.7 |
| NG2 |
CD |
HD1 |
HD3 |
234.7 |
240.5 |
| HD2 |
CD |
HD1 |
HD3 |
109.5 |
120.8 |
| NG2 |
CD |
HD2 |
HD1 |
226.4 |
241.2 |
| NG2 |
CD |
HD2 |
HD3 |
113.2 |
119.5 |
| HD1 |
CD |
HD2 |
HD3 |
246.8 |
238.4 |
| NG2 |
CD |
HD3 |
HD1 |
133.7 |
118.8 |
| NG2 |
CD |
HD3 |
HD2 |
246.9 |
240.4 |
| HD1 |
CD |
HD3 |
HD2 |
113.2 |
121.6 |
| CG1 |
C |
O |
OXT |
|
180.0 |
| O |
C |
OXT |
HXT |
|
0.0 |
| CG1 |
C |
OXT |
O |
|
180.0 |