PDB Chemical Component IM6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IM6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C5 1.361 1.341
N1 C2 1.347 1.306
C5 C4 1.376 1.347
C2 N3 1.340 1.357
C4 N3 1.337 1.371
N3 C6 1.366 1.404
C6 C11 1.407 1.410
C6 C7 1.410 1.356
C11 C10 1.389 1.360
C7 N8 1.343 1.365
C10 C9 1.378 1.409
N8 C9 1.351 1.371
N8 C12 1.330 1.370
C9 N14 1.360 1.327
C12 C13 1.376 1.358
N14 C13 1.358 1.338
C13 N15 1.353 1.401
O47 C16 1.238 1.216
N15 C16 1.351 1.348
C16 C17 1.519 1.478
C17 C22 1.401 1.396
C17 C18 1.402 1.397
C22 C21 1.394 1.379
C18 C19 1.412 1.380
C21 C20 1.392 1.383
C19 C20 1.410 1.383
C20 C27 1.526 1.507
C32 C27 1.530 1.530
C27 C28 1.532 1.530
C27 C36 1.529 1.530
C4 H1 1.080 1.080
C5 H2 1.079 1.080
C7 H3 1.080 1.080
C10 H4 1.080 1.080
C21 H5 1.080 1.081
C22 H6 1.080 1.080
C28 H7 1.100 1.090
C28 H8 1.100 1.090
C28 H9 1.100 1.089
C36 H10 1.100 1.090
C36 H11 1.100 1.090
C36 H12 1.100 1.090
C32 H13 1.100 1.090
C32 H14 1.100 1.090
C32 H15 1.100 1.091
C19 H16 1.080 1.080
C18 H17 1.080 1.080
N15 H18 1.000 0.970
C12 H19 1.080 1.080
C11 H20 1.080 1.080
C2 H21 1.080 1.080

Bond Angles for IM6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 N1 C2 108.2 109.4
N1 C5 C4 108.5 108.2
N1 C5 H2 125.7 126.0
N1 C2 N3 106.4 108.6
N1 C2 H21 126.8 125.7
C5 C4 H1 127.5 126.6
C4 N3 C6 124.4 126.5
N3 C6 C11 123.7 119.9
N3 C6 C7 123.3 119.9
C7 C6 C11 113.0 120.1
C6 C11 C10 122.7 119.6
C6 C11 H20 118.6 120.1
C6 C7 N8 123.8 120.5
C6 C7 H3 118.1 119.7
C11 C10 H4 119.8 120.2
C7 N8 C9 122.1 120.5
C7 N8 C12 131.0 132.4
N8 C7 H3 118.1 119.8
C10 C9 N8 118.0 119.7
C10 C9 N14 131.7 132.1
C9 C10 H4 119.8 120.3
N8 C9 N14 110.4 108.2
N8 C12 H19 125.5 126.4
C13 N15 C16 124.0 120.0
C13 N15 H18 118.0 120.0
C16 C17 C18 121.3 120.1
C22 C17 C18 117.9 119.7
C17 C22 C21 121.8 119.8
C17 C22 H6 119.2 120.0
C17 C18 C19 120.2 119.8
C17 C18 H17 119.9 120.0
C22 C21 H5 119.5 119.9
C18 C19 H16 119.4 119.9
C21 C20 C27 118.5 119.8
C20 C27 C28 110.0 109.5
C20 C27 C36 111.1 109.5
C27 C28 H7 109.5 109.5
C27 C28 H8 109.5 109.5
C27 C28 H9 109.4 109.5
C27 C36 H10 109.5 109.5
C27 C36 H11 109.5 109.5
C27 C36 H12 109.5 109.5
H7 C28 H8 109.5 109.4
H7 C28 H9 109.4 109.5
H8 C28 H9 109.5 109.4
H10 C36 H11 109.5 109.4
H10 C36 H12 109.5 109.5
H11 C36 H12 109.5 109.4
H13 C32 H14 109.5 109.5
H13 C32 H15 109.4 109.4
H14 C32 H15 109.5 109.4

Torsion Angles for IM6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 N1 C2 N3 0.3 360.0
C5 N1 C2 H21 180.3 180.0
N1 C5 C4 H1 179.6 180.0
C2 N1 C5 C4 0.1 0.0
C2 N1 C5 H2 180.0 180.0
C4 C5 N1 C2 0.1 0.0
N1 C5 C4 H2 180.0 180.0
C5 C4 N3 C6 180.4 180.0
N1 C2 N3 H21 180.0 180.0
N1 C5 C4 N3 359.6 360.0
N1 C2 N3 C4 359.4 0.0
C4 N3 C6 C11 192.7 295.0
C4 N3 C6 C7 13.2 115.3
N1 C2 N3 C6 179.6 180.0
C7 C6 N3 C11 180.6 180.2
N3 C6 C11 C10 179.9 179.8
N3 C6 C11 H20 359.9 360.0
N3 C6 C7 N8 179.9 180.0
N3 C6 C7 H3 359.9 360.0
N3 C6 C11 C7 180.5 180.2
C11 C6 C7 N8 0.4 0.2
C11 C6 C7 H3 180.5 180.2
C6 C11 C10 H4 180.1 180.2
N3 C6 C7 C11 179.5 179.8
C7 C6 C11 C10 359.4 359.5
C7 C6 C11 H20 179.3 179.7
C6 C7 N8 C9 0.4 0.0
C6 C7 N8 C12 178.5 180.0
N8 C7 C6 H3 180.0 180.0
C6 C11 C10 H20 180.0 180.2
C9 C10 C11 H4 180.0 180.2
N8 C7 C6 C11 0.4 0.2
C6 C7 N8 H3 180.0 180.0
C10 C9 N8 C7 359.0 360.0
C7 N8 C9 N14 179.2 179.8
C7 N8 C12 H19 0.6 0.1
C6 C11 C10 C9 0.0 0.4
C11 C10 C9 H4 180.0 179.8
C7 N8 C9 C10 359.0 360.0
N8 C9 C10 N14 180.3 179.8
C7 N8 C9 C12 178.5 180.0
C9 N8 C7 H3 180.4 180.0
C10 C9 N8 N14 179.8 180.2
N8 C9 C10 H4 180.8 180.0
C9 N8 C12 H19 179.0 180.1
C7 N8 C12 C9 181.7 180.0
C12 N8 C7 H3 358.5 360.0
C10 C9 N8 C12 180.4 180.0
C10 C9 N14 N8 180.3 179.8
N14 C9 C10 H4 0.5 0.2
C7 N8 C12 C13 180.6 180.0
C12 C13 N15 H18 178.9 180.0
C10 C9 N14 C13 180.2 180.1
N14 C13 N15 H18 357.4 359.9
C13 N15 C16 O47 1.5 360.0
O47 C16 C17 C18 328.6 180.3
C13 N15 C16 H18 180.0 180.0
C13 N15 C16 C17 181.7 180.0
C22 C17 C16 C18 179.8 179.7
C16 C17 C22 H6 359.9 0.3
C16 C17 C18 C19 180.3 179.7
C16 C17 C18 H17 0.2 359.8
C16 C17 C22 C18 180.2 180.3
C22 C17 C18 C19 0.5 360.0
C22 C17 C18 H17 180.4 180.0
C17 C22 C21 H5 180.2 180.1
C18 C17 C22 C21 359.7 0.0
C18 C17 C22 H6 179.7 180.0
C17 C18 C19 H16 179.5 180.0
C21 C22 C17 C18 359.7 0.0
C17 C22 C21 H6 180.0 180.0
C22 C21 C20 C27 180.6 180.1
C17 C18 C19 H17 180.0 180.1
C17 C22 C21 C20 0.2 360.0
C21 C20 C27 C28 55.4 60.0
C21 C20 C27 C36 175.1 180.0
C17 C18 C19 C20 359.5 0.1
C20 C27 C28 H7 180.0 60.1
C20 C27 C28 H8 300.0 180.0
C20 C27 C28 H9 60.0 300.0
C20 C27 C36 H10 180.0 60.0
C20 C27 C36 H11 300.0 180.0
C20 C27 C36 H12 60.0 300.0
C32 C27 C28 H7 300.8 180.0
C32 C27 C28 H8 60.8 300.0
C32 C27 C28 H9 180.8 60.0
C32 C27 C36 H10 58.5 300.0
C32 C27 C36 H11 178.4 60.0
C32 C27 C36 H12 298.4 179.9
C20 C27 C28 C36 121.5 120.0
H7 C28 C27 H8 240.0 240.1
H7 C28 C27 H9 120.0 120.1
H8 C28 C27 H9 240.0 240.0
C20 C27 C36 C28 239.2 240.0
C36 C27 C28 H7 58.5 300.0
C36 C27 C28 H8 178.5 60.0
C36 C27 C28 H9 298.5 179.9
H10 C36 C27 H11 240.0 240.0
H10 C36 C27 H12 120.0 120.0
H11 C36 C27 H12 240.0 240.0
H1 C4 N3 C6 0.4 360.0
H2 C5 N1 C2 180.0 180.0
N1 C5 H2 C4 180.0 180.0
H2 C5 C4 H1 359.7 0.0
H3 C7 C6 C11 180.5 180.2
C6 C7 H3 N8 180.0 180.0
H3 C7 N8 C9 180.4 180.0
H3 C7 N8 C12 358.5 360.0
H4 C10 C9 N8 180.8 180.0
H4 C10 C9 N14 0.5 0.2
H5 C21 C20 C27 0.5 359.9
H6 C22 C17 C18 179.7 180.0
C17 C22 H6 C21 180.0 180.0
H6 C22 C21 H5 0.2 0.1
C27 C28 H7 H8 120.0 120.0
C27 C28 H7 H9 240.0 240.0
H8 C28 H7 H9 120.0 120.0
C27 C28 H8 H7 239.9 240.0
C27 C28 H8 H9 120.0 120.0
H7 C28 H8 H9 240.0 240.0
C27 C28 H9 H7 120.0 120.0
C27 C28 H9 H8 240.0 240.0
H7 C28 H9 H8 120.0 120.0
C27 C36 H10 H11 120.0 120.0
C27 C36 H10 H12 240.0 240.0
H11 C36 H10 H12 120.0 119.9
C27 C36 H11 H10 240.0 240.0
C27 C36 H11 H12 120.0 120.0
H10 C36 H11 H12 240.0 240.0
C27 C36 H12 H10 120.0 120.0
C27 C36 H12 H11 240.0 240.0
H10 C36 H12 H11 120.0 120.0
H14 C32 H13 H15 120.0 120.0
H13 C32 H14 H15 240.0 240.0
H13 C32 H15 H14 120.0 120.0
C17 C18 H17 C19 180.0 179.9
H17 C18 C19 H16 359.5 359.9
C13 N15 H18 C16 180.0 180.0
C6 C11 H20 C10 180.0 179.8
H20 C11 C10 H4 0.1 0.0
N1 C2 H21 N3 180.0 180.0