PDB Chemical Component IM5

Ideal Model

Chemical Description

Name 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one
Synonyms DADMe-ImmG
Formula C12 H17 N5 O3
Formal charge 0
Molecular weight 279.295 g/mol
Component type NON-POLYMER

Chemical features

Atom count 37
Chiral atom count 2
Chiral atoms C3' C4'
Bond count 39
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one
Systematic name (OpenEye OEToolkits) 2-azanyl-7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2c(CN3C[C@H](O)[C@@H](CO)C3)c[nH]c2C(=O)N1
SMILES (CACTVS) NC1=Nc2c(CN3C[CH](O)[CH](CO)C3)c[nH]c2C(=O)N1
Stereo SMILES (OpenEye) c1c(c2c([nH]1)C(=O)NC(=N2)N)CN3C[C@@H]([C@H](C3)O)CO
InChI descriptor InChI=1S/C12H17N5O3/c13-12-15-9-6(1-14-10(9)11(20)16-12)2-17-3-7(5-18)8(19)4-17/h1,7-8,14,18-19H,2-5H2,(H3,13,15,16,20)/t7-,8+/m1/s1
InChIKey descriptor GSPTUGDLYPMLCQ-SFYZADRCSA-N

Status Information

Last modified 2020-06-17
Created 2010-11-05
Release status REL
Model PDB code 3PHB
Processing site RCSB