PDB Chemical Component IM2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IM2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C7 C6 1.517 1.507
C7 O7 1.234 1.208
C7 H71 1.080 1.080
C2 C3 1.329 1.346
C2 S21 1.766 1.762
C2 C1 1.542 1.512
C6 C5 1.565 1.529
C6 C61 1.530 1.530
C6 H61A 1.101 1.090
C5 N4 1.472 1.468
C5 C1 1.549 1.540
C5 H51 1.100 1.090
C3 N4 1.431 1.404
C3 C31 1.476 1.415
C61 O62 1.437 1.430
C61 C62 1.573 1.531
C61 H61 1.100 1.090
O62 HO6 0.950 0.966
C62 H621 1.100 1.090
C62 H622 1.100 1.090
C62 H623 1.100 1.090
N4 H41 1.000 0.970
C31 O31 1.335 1.218
C31 O32 1.218 1.350
O32 H321 0.950 0.967
S21 C22 1.825 1.810
C22 C23 1.553 1.530
C22 H221 1.100 1.090
C22 H222 1.100 1.089
C23 N24 1.472 1.466
C23 H231 1.100 1.090
C23 H232 1.100 1.090
N24 C25 1.333 1.370
N24 H241 1.000 0.970
C25 N26 1.255 1.294
C25 H25 1.080 1.080
N26 H26 1.000 0.970
C1 H11 1.100 1.089
C1 H12 1.100 1.090

Bond Angles for IM2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C7 O7 120.4 120.0
C6 C7 H71 119.8 120.0
C7 C6 C5 106.8 109.5
C7 C6 C61 114.5 109.4
C7 C6 H61A 108.2 109.5
O7 C7 H71 119.8 120.0
C3 C2 S21 123.8 125.6
C3 C2 C1 111.5 108.8
C2 C3 N4 110.5 112.8
C2 C3 C31 129.0 123.6
S21 C2 C1 124.6 125.6
C2 S21 C22 98.9 100.0
C2 C1 C5 98.0 104.5
C2 C1 H11 112.3 110.4
C2 C1 H12 112.3 110.4
C5 C6 C61 111.6 109.5
C5 C6 H61A 107.6 109.5
C6 C5 N4 101.1 110.4
C6 C5 C1 112.3 110.6
C6 C5 H51 112.0 110.3
C61 C6 H61A 108.0 109.4
C6 C61 O62 114.1 109.5
C6 C61 C62 110.8 109.5
C6 C61 H61 107.5 109.5
N4 C5 C1 105.1 104.7
N4 C5 H51 113.4 110.4
C5 N4 C3 104.9 109.2
C5 N4 H41 110.6 125.4
C1 C5 H51 112.2 110.3
C5 C1 H11 112.2 110.1
C5 C1 H12 112.3 110.8
N4 C3 C31 120.4 123.6
C3 N4 H41 110.6 125.4
C3 C31 O31 117.6 120.0
C3 C31 O32 118.9 120.0
O62 C61 C62 108.5 109.4
O62 C61 H61 108.7 109.4
C61 O62 HO6 109.5 114.0
C62 C61 H61 107.0 109.5
C61 C62 H621 109.5 109.4
C61 C62 H622 109.5 109.5
C61 C62 H623 109.5 109.4
H621 C62 H622 109.4 109.5
H621 C62 H623 109.5 109.5
H622 C62 H623 109.5 109.5
O31 C31 O32 123.5 120.0
C31 O32 H321 109.5 114.0
S21 C22 C23 111.8 109.5
S21 C22 H221 108.9 109.5
S21 C22 H222 108.9 109.5
C23 C22 H221 108.9 109.5
C23 C22 H222 108.9 109.5
C22 C23 N24 112.2 109.5
C22 C23 H231 108.8 109.5
C22 C23 H232 108.8 109.5
H221 C22 H222 109.5 109.5
N24 C23 H231 108.8 109.5
N24 C23 H232 108.8 109.5
C23 N24 C25 114.9 120.0
C23 N24 H241 122.5 119.9
H231 C23 H232 109.5 109.4
C25 N24 H241 122.5 120.0
N24 C25 N26 125.3 120.0
N24 C25 H25 117.4 120.0
N26 C25 H25 117.4 120.0
C25 N26 H26 112.0 120.0
H11 C1 H12 109.5 110.5

Torsion Angles for IM2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O7 C7 C6 H71 180.0 180.2
C5 C6 C7 C61 236.0 240.0
C5 C6 C7 H61A 115.6 120.1
C7 C6 C5 N4 298.1 58.5
C7 C6 C5 C1 186.5 303.1
C7 C6 C5 H51 59.2 180.9
C61 C6 C7 H61A 239.5 240.1
C7 C6 C61 O62 54.7 300.0
C7 C6 C61 C62 292.0 180.0
C7 C6 C61 H61 175.4 60.0
C6 C7 O7 H71 180.0 179.8
O7 C7 C6 C5 329.0 120.0
O7 C7 C6 C61 93.0 240.0
O7 C7 C6 H61A 213.4 359.9
C6 C7 H71 O7 180.0 180.2
H71 C7 C6 C5 149.0 299.8
H71 C7 C6 C61 273.0 59.8
H71 C7 C6 H61A 33.4 179.7
S21 C2 C3 C1 183.2 180.3
C3 C2 S21 C22 180.6 245.3
C3 C2 C1 C5 342.7 0.4
C3 C2 C1 H11 100.8 118.8
C3 C2 C1 H12 224.6 241.3
C5 N4 C3 C2 20.7 0.1
N4 C3 C2 C31 182.9 180.0
C2 C3 N4 H41 261.4 180.3
C2 C3 C31 O31 163.4 5.2
C2 C3 C31 O32 342.9 185.3
C3 C2 S21 C1 176.3 179.7
S21 C2 C3 N4 182.0 180.0
S21 C2 C3 C31 359.1 0.0
S21 C2 C1 C5 159.5 180.1
S21 C2 C1 H11 277.5 298.5
S21 C2 C1 H12 41.3 61.0
C2 S21 C22 C23 87.4 184.9
C2 S21 C22 H221 207.8 304.9
C2 S21 C22 H222 327.1 64.8
C3 C2 C1 S21 183.3 180.3
C1 C2 C3 N4 358.8 359.7
C1 C2 C3 C31 175.9 179.7
C1 C2 S21 C22 4.3 65.6
C6 C5 C1 C2 137.6 118.6
N4 C5 C1 C2 28.6 359.6
C2 C1 C5 H51 264.8 240.8
C5 C1 C2 H11 241.9 241.7
C5 C1 C2 H12 118.1 119.1
H11 C1 C2 H12 236.2 237.5
C5 C6 C7 O7 329.0 120.0
C5 C6 C7 H71 149.0 299.8
C7 C6 C5 C61 125.8 120.0
C7 C6 C5 H61A 244.1 240.0
C2 C1 C5 C6 137.6 118.6
C61 C6 C5 H61A 118.3 120.0
C5 C6 C61 O62 176.1 60.0
C5 C6 C61 C62 53.4 300.0
C5 C6 C61 H61 296.8 180.0
N4 C5 C6 C1 111.6 115.4
N4 C5 C6 H51 238.9 237.6
C6 C5 N4 C3 211.8 241.2
C6 C5 N4 H41 331.1 61.0
C1 C5 C6 H51 127.3 122.3
C6 C5 C1 H11 19.5 360.0
C6 C5 C1 H12 255.7 237.5
C61 C6 C7 O7 93.0 240.0
C61 C6 C7 H71 273.0 59.8
C7 C6 C61 C5 238.6 240.0
C7 C6 C61 H61A 120.5 119.9
C5 C6 C61 H61A 242.0 239.9
C61 C6 C5 N4 172.3 298.5
C61 C6 C5 C1 60.8 183.2
C61 C6 C5 H51 293.4 60.9
O62 C61 C6 C62 122.8 120.0
O62 C61 C6 H61 239.4 240.0
C6 C61 O62 HO6 180.0 180.1
C62 C61 C6 H61 116.6 120.0
C6 C61 C62 H621 180.0 60.0
C6 C61 C62 H622 300.0 180.0
C6 C61 C62 H623 60.0 300.0
H61A C6 C7 O7 213.4 359.9
H61A C6 C7 H71 33.4 179.7
C7 C6 H61A C5 115.0 120.0
C7 C6 H61A C61 235.6 240.1
C5 C6 H61A C61 120.6 120.0
H61A C6 C5 N4 54.0 178.5
H61A C6 C5 C1 302.5 63.2
H61A C6 C5 H51 175.1 300.9
H61A C6 C61 O62 294.2 180.0
H61A C6 C61 C62 171.4 60.1
H61A C6 C61 H61 54.8 300.0
C2 C3 N4 C5 20.7 0.1
C2 C1 C5 N4 28.6 359.6
N4 C5 C6 C61 172.3 298.5
N4 C5 C6 H61A 54.0 178.5
C6 C5 N4 C1 243.0 241.0
C6 C5 N4 H51 120.1 122.3
C1 C5 N4 H51 237.1 241.3
N4 C5 C1 H11 270.5 241.0
N4 C5 C1 H12 146.7 118.5
C5 N4 C3 C31 203.3 180.0
C3 N4 C5 H41 240.7 180.2
C2 C1 C5 H11 118.1 118.6
C2 C1 C5 H12 241.9 241.1
C1 C5 C6 C61 60.8 183.2
C1 C5 C6 H61A 302.5 63.2
C6 C5 C1 N4 109.0 118.9
C6 C5 C1 H51 232.8 237.7
N4 C5 C1 H51 123.7 118.8
C1 C5 N4 C3 328.8 0.2
C1 C5 N4 H41 88.0 180.0
H11 C1 C5 H12 123.8 122.5
H51 C5 C6 C61 293.4 60.9
H51 C5 C6 H61A 175.1 300.9
C6 C5 H51 N4 246.3 237.6
C6 C5 H51 C1 127.4 122.5
N4 C5 H51 C1 241.1 244.8
H51 C5 N4 C3 91.7 118.9
H51 C5 N4 H41 211.0 298.7
H51 C5 C1 H11 146.7 122.3
H51 C5 C1 H12 22.9 359.8
N4 C3 C2 S21 182.0 180.0
N4 C3 C2 C1 358.8 359.7
C2 C3 N4 C31 177.4 180.0
C3 N4 C5 C1 328.8 0.2
C3 N4 C5 H51 91.7 118.9
C5 N4 C3 H41 119.3 179.8
N4 C3 C31 O31 340.3 185.3
N4 C3 C31 O32 159.7 5.3
C31 C3 C2 S21 359.1 0.0
C31 C3 C2 C1 175.9 179.7
C2 C3 C31 N4 183.1 180.0
C31 C3 N4 H41 84.0 0.2
O31 C31 C3 O32 180.5 179.9
C3 C31 O32 H321 180.6 180.0
O62 C61 C6 H61A 294.2 180.0
C6 C61 O62 C62 236.0 240.0
C6 C61 O62 H61 120.0 120.0
C62 C61 O62 H61 244.0 240.0
O62 C61 C62 H621 54.1 300.0
O62 C61 C62 H622 174.0 60.0
O62 C61 C62 H623 294.0 180.0
C62 C61 C6 H61A 171.4 60.1
C6 C61 C62 O62 126.0 120.0
C6 C61 C62 H61 243.1 239.9
O62 C61 C62 H61 117.1 119.9
C62 C61 O62 HO6 304.0 300.1
H621 C62 C61 H622 240.0 240.0
H621 C62 C61 H623 120.0 120.0
H622 C62 C61 H623 240.0 240.0
H61 C61 C6 H61A 54.8 300.0
C6 C61 H61 O62 236.0 240.0
C6 C61 H61 C62 119.1 120.0
O62 C61 H61 C62 243.0 240.1
H61 C61 O62 HO6 60.0 60.0
H61 C61 C62 H621 296.9 180.0
H61 C61 C62 H622 56.9 300.0
H61 C61 C62 H623 176.9 60.0
HO6 O62 C61 C62 304.0 300.1
HO6 O62 C61 H61 60.0 60.0
H621 C62 C61 H61 296.9 180.0
C61 C62 H621 H622 120.0 120.0
C61 C62 H621 H623 240.0 240.1
H622 C62 H621 H623 120.0 120.1
H622 C62 C61 H61 56.9 300.0
C61 C62 H622 H621 240.0 240.0
C61 C62 H622 H623 120.0 119.9
H621 C62 H622 H623 240.0 239.9
H623 C62 C61 H61 176.9 60.0
C61 C62 H623 H621 120.0 120.0
C61 C62 H623 H622 240.0 240.0
H621 C62 H623 H622 120.0 120.1
H41 N4 C5 C1 88.0 180.0
H41 N4 C5 H51 211.0 298.7
C5 N4 H41 C3 244.2 180.2
H41 N4 C3 C31 84.0 0.2
C3 C31 O31 O32 179.5 180.1
O31 C31 O32 H321 0.0 0.0
C3 C31 O32 O31 180.6 179.9
C22 S21 C2 C1 4.3 65.6
C23 C22 S21 H221 239.7 240.0
C23 C22 S21 H222 120.3 120.0
S21 C22 C23 N24 46.2 180.0
S21 C22 C23 H231 166.7 300.0
S21 C22 C23 H232 285.8 60.0
H221 C22 S21 H222 240.7 240.0
S21 C22 C23 H221 120.3 120.0
S21 C22 C23 H222 239.6 240.0
H221 C22 C23 H222 119.3 120.0
N24 C23 C22 H231 239.6 240.0
N24 C23 C22 H232 120.4 120.0
C22 C23 N24 C25 217.1 180.0
C22 C23 N24 H241 37.1 359.9
H231 C23 C22 H232 240.8 240.0
S21 C22 H221 C23 237.8 240.0
S21 C22 H221 H222 118.9 120.0
C23 C22 H221 H222 241.1 240.0
H221 C22 C23 N24 285.9 60.0
H221 C22 C23 H231 46.3 180.0
H221 C22 C23 H232 165.5 300.0
S21 C22 H222 C23 122.2 120.0
S21 C22 H222 H221 241.1 240.0
C23 C22 H222 H221 118.9 120.0
H222 C22 C23 N24 166.6 300.0
H222 C22 C23 H231 287.0 60.0
H222 C22 C23 H232 46.2 180.0
N24 C23 C22 H221 285.9 60.0
N24 C23 C22 H222 166.6 300.0
C22 C23 N24 H231 120.4 120.0
C22 C23 N24 H232 239.6 239.9
H231 C23 N24 H232 119.2 119.9
C25 N24 C23 H241 180.0 180.1
C23 N24 C25 N26 313.2 360.0
C23 N24 C25 H25 133.2 180.0
H231 C23 C22 H221 46.3 180.0
H231 C23 C22 H222 287.0 60.0
C22 C23 H231 N24 237.5 240.0
C22 C23 H231 H232 118.7 120.1
N24 C23 H231 H232 241.3 240.1
H231 C23 N24 C25 96.7 60.0
H231 C23 N24 H241 276.7 239.9
H232 C23 C22 H221 165.5 300.0
H232 C23 C22 H222 46.2 180.0
C22 C23 H232 N24 122.5 120.0
C22 C23 H232 H231 241.3 240.0
N24 C23 H232 H231 118.8 119.9
H232 C23 N24 C25 337.5 300.1
H232 C23 N24 H241 157.6 120.0
C25 N24 C23 H231 96.7 60.0
C25 N24 C23 H232 337.5 300.1
C23 N24 C25 H241 180.0 179.9
N26 C25 N24 H25 180.0 180.0
N24 C25 N26 H26 180.0 180.1
H241 N24 C23 H231 276.7 239.9
H241 N24 C23 H232 157.6 120.0
C23 N24 H241 C25 180.0 180.1
H241 N24 C25 N26 133.1 180.0
H241 N24 C25 H25 313.1 0.0
N26 C25 N24 H241 133.1 180.0
N24 C25 N26 H25 180.0 180.0
H25 C25 N24 H241 313.1 0.0
N24 C25 H25 N26 180.0 180.0
H25 C25 N26 H26 360.0 0.1
H26 N26 C25 H25 360.0 0.1
C2 C1 H11 C5 250.7 245.1
C2 C1 H11 H12 125.4 122.5
H11 C1 C5 H51 146.7 122.3
C5 C1 H11 H12 234.6 237.3
C2 C1 H12 C5 109.3 115.3
C2 C1 H12 H11 234.6 237.5
H12 C1 C5 H51 22.9 359.8
C5 C1 H12 H11 125.3 122.3