PDB Chemical Component IL0
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IL0
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.467 |
1.469 |
| N |
H |
1.000 |
1.008 |
| N |
H2 |
1.000 |
1.009 |
| CA |
C |
1.524 |
1.530 |
| CA |
CB |
1.569 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.246 |
1.429 |
| C |
OXT |
1.253 |
1.429 |
| CB |
CG1 |
1.538 |
1.531 |
| CB |
CG2 |
1.532 |
1.529 |
| CB |
HB |
1.100 |
1.090 |
| CG1 |
CD1 |
1.530 |
1.529 |
| CG1 |
HG12 |
1.100 |
1.090 |
| CG1 |
HG13 |
1.100 |
1.089 |
| CG2 |
HG21 |
1.100 |
1.091 |
| CG2 |
HG22 |
1.100 |
1.091 |
| CG2 |
HG23 |
1.100 |
1.089 |
| CD1 |
HD11 |
1.100 |
1.089 |
| CD1 |
HD12 |
1.100 |
1.090 |
| CD1 |
HD13 |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.967 |
| C |
H14 |
1.100 |
1.090 |
| O |
H15 |
0.950 |
0.967 |
Bond Angles for IL0
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
C |
111.2 |
109.4 |
| N |
CA |
CB |
112.2 |
109.5 |
| N |
CA |
HA |
105.8 |
109.5 |
| H |
N |
H2 |
109.4 |
111.0 |
| C |
CA |
CB |
107.5 |
109.4 |
| C |
CA |
HA |
110.6 |
109.5 |
| CA |
C |
O |
117.8 |
109.5 |
| CA |
C |
OXT |
117.6 |
109.5 |
| CA |
C |
H14 |
160.2 |
109.4 |
| CB |
CA |
HA |
109.6 |
109.5 |
| CA |
CB |
CG1 |
110.3 |
109.5 |
| CA |
CB |
CG2 |
110.3 |
109.5 |
| CA |
CB |
HB |
108.5 |
109.5 |
| O |
C |
OXT |
124.6 |
109.5 |
| O |
C |
H14 |
62.7 |
109.5 |
| C |
O |
H15 |
109.5 |
114.0 |
| C |
OXT |
HXT |
109.5 |
114.0 |
| OXT |
C |
H14 |
65.9 |
109.5 |
| CG1 |
CB |
CG2 |
110.1 |
109.5 |
| CG1 |
CB |
HB |
108.8 |
109.5 |
| CB |
CG1 |
CD1 |
113.1 |
109.5 |
| CB |
CG1 |
HG12 |
108.3 |
109.4 |
| CB |
CG1 |
HG13 |
108.3 |
109.5 |
| CG2 |
CB |
HB |
108.8 |
109.5 |
| CB |
CG2 |
HG21 |
109.5 |
109.5 |
| CB |
CG2 |
HG22 |
109.4 |
109.5 |
| CB |
CG2 |
HG23 |
109.5 |
109.5 |
| CD1 |
CG1 |
HG12 |
108.3 |
109.5 |
| CD1 |
CG1 |
HG13 |
108.3 |
109.5 |
| CG1 |
CD1 |
HD11 |
109.5 |
109.5 |
| CG1 |
CD1 |
HD12 |
109.5 |
109.5 |
| CG1 |
CD1 |
HD13 |
109.4 |
109.5 |
| HG12 |
CG1 |
HG13 |
110.6 |
109.5 |
| HG21 |
CG2 |
HG22 |
109.5 |
109.4 |
| HG21 |
CG2 |
HG23 |
109.5 |
109.5 |
| HG22 |
CG2 |
HG23 |
109.5 |
109.5 |
| HD11 |
CD1 |
HD12 |
109.4 |
109.5 |
| HD11 |
CD1 |
HD13 |
109.5 |
109.5 |
| HD12 |
CD1 |
HD13 |
109.5 |
109.4 |
Torsion Angles for IL0
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
120.4 |
119.9 |
| C |
CA |
N |
HA |
239.9 |
240.0 |
| N |
CA |
C |
O |
321.6 |
305.0 |
| N |
CA |
C |
OXT |
143.2 |
65.0 |
| N |
CA |
C |
H14 |
47.9 |
185.0 |
| CB |
CA |
N |
HA |
119.4 |
120.0 |
| N |
CA |
CB |
CG1 |
196.4 |
300.0 |
| N |
CA |
CB |
CG2 |
74.6 |
180.0 |
| N |
CA |
CB |
HB |
315.5 |
60.0 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
59.6 |
300.0 |
| H |
N |
CA |
HA |
300.2 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| H2 |
N |
CA |
C |
300.0 |
183.9 |
| H2 |
N |
CA |
CB |
179.6 |
64.0 |
| H2 |
N |
CA |
HA |
60.2 |
304.0 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
300.0 |
183.9 |
| N |
CA |
C |
CB |
236.8 |
240.0 |
| N |
CA |
C |
HA |
117.2 |
120.0 |
| CB |
CA |
C |
HA |
240.4 |
240.0 |
| C |
CA |
CB |
CG1 |
73.8 |
180.1 |
| C |
CA |
CB |
CG2 |
312.0 |
60.1 |
| C |
CA |
CB |
HB |
192.9 |
300.0 |
| O |
C |
CA |
OXT |
178.4 |
240.0 |
| O |
C |
CA |
H14 |
273.6 |
120.0 |
| CA |
C |
O |
H15 |
180.0 |
60.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| OXT |
C |
CA |
H14 |
95.3 |
240.0 |
| CB |
CA |
N |
H |
59.6 |
300.0 |
| CB |
CA |
N |
H2 |
179.6 |
64.0 |
| N |
CA |
CB |
C |
122.5 |
119.9 |
| N |
CA |
CB |
HA |
242.8 |
240.0 |
| C |
CA |
CB |
HA |
120.3 |
120.0 |
| CB |
CA |
C |
O |
84.7 |
65.0 |
| CB |
CA |
C |
OXT |
266.4 |
185.0 |
| CB |
CA |
C |
H14 |
171.1 |
305.0 |
| CG1 |
CB |
CA |
CG2 |
121.8 |
120.0 |
| CG1 |
CB |
CA |
HB |
240.9 |
240.0 |
| CA |
CB |
CG1 |
CD1 |
185.8 |
175.0 |
| CA |
CB |
CG1 |
HG12 |
305.8 |
295.0 |
| CA |
CB |
CG1 |
HG13 |
65.9 |
55.0 |
| CG2 |
CB |
CA |
HB |
119.1 |
120.0 |
| CA |
CB |
CG2 |
HG21 |
180.0 |
300.0 |
| CA |
CB |
CG2 |
HG22 |
300.0 |
59.9 |
| CA |
CB |
CG2 |
HG23 |
60.0 |
180.0 |
| HA |
CA |
N |
H |
300.2 |
180.0 |
| HA |
CA |
N |
H2 |
60.2 |
304.0 |
| N |
CA |
HA |
C |
239.5 |
240.0 |
| N |
CA |
HA |
CB |
121.2 |
120.0 |
| C |
CA |
HA |
CB |
241.7 |
240.0 |
| HA |
CA |
C |
O |
204.3 |
185.0 |
| HA |
CA |
C |
OXT |
26.0 |
305.0 |
| HA |
CA |
C |
H14 |
290.7 |
65.0 |
| HA |
CA |
CB |
CG1 |
313.6 |
60.0 |
| HA |
CA |
CB |
CG2 |
191.8 |
300.0 |
| HA |
CA |
CB |
HB |
72.7 |
180.0 |
| O |
C |
CA |
CB |
84.7 |
65.0 |
| O |
C |
CA |
HA |
204.3 |
185.0 |
| CA |
C |
O |
OXT |
181.8 |
120.0 |
| CA |
C |
O |
H14 |
157.6 |
240.0 |
| O |
C |
OXT |
HXT |
1.8 |
300.0 |
| OXT |
C |
O |
H14 |
335.8 |
120.0 |
| OXT |
C |
CA |
CB |
266.4 |
185.0 |
| OXT |
C |
CA |
HA |
26.0 |
305.0 |
| CA |
C |
OXT |
O |
178.2 |
240.0 |
| CA |
C |
OXT |
H14 |
201.7 |
120.0 |
| O |
C |
OXT |
H14 |
23.5 |
240.0 |
| OXT |
C |
O |
H15 |
358.2 |
300.0 |
| CG1 |
CB |
CA |
HA |
313.6 |
60.0 |
| CA |
CB |
CG1 |
CG2 |
238.1 |
240.0 |
| CA |
CB |
CG1 |
HB |
118.9 |
120.0 |
| CG2 |
CB |
CG1 |
HB |
240.9 |
240.0 |
| CG1 |
CB |
CG2 |
HG21 |
58.0 |
180.0 |
| CG1 |
CB |
CG2 |
HG22 |
178.1 |
299.9 |
| CG1 |
CB |
CG2 |
HG23 |
298.0 |
60.0 |
| CD1 |
CG1 |
CB |
HG12 |
240.0 |
240.0 |
| CD1 |
CG1 |
CB |
HG13 |
120.0 |
120.0 |
| CB |
CG1 |
CD1 |
HD11 |
180.0 |
300.0 |
| CB |
CG1 |
CD1 |
HD12 |
300.0 |
60.0 |
| CB |
CG1 |
CD1 |
HD13 |
60.0 |
179.9 |
| HG12 |
CG1 |
CB |
HG13 |
240.0 |
240.0 |
| CG2 |
CB |
CA |
HA |
191.8 |
300.0 |
| CA |
CB |
CG2 |
CG1 |
122.0 |
120.0 |
| CA |
CB |
CG2 |
HB |
241.1 |
240.0 |
| CG1 |
CB |
CG2 |
HB |
119.1 |
120.0 |
| CG2 |
CB |
CG1 |
CD1 |
307.8 |
295.0 |
| CG2 |
CB |
CG1 |
HG12 |
67.8 |
55.1 |
| CG2 |
CB |
CG1 |
HG13 |
187.8 |
175.0 |
| HG21 |
CG2 |
CB |
HG22 |
239.9 |
240.1 |
| HG21 |
CG2 |
CB |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HG23 |
240.0 |
239.9 |
| HB |
CB |
CA |
HA |
72.7 |
180.0 |
| CA |
CB |
HB |
CG1 |
239.9 |
240.0 |
| CA |
CB |
HB |
CG2 |
120.0 |
120.1 |
| CG1 |
CB |
HB |
CG2 |
240.1 |
240.0 |
| HB |
CB |
CG1 |
CD1 |
66.9 |
55.0 |
| HB |
CB |
CG1 |
HG12 |
186.9 |
175.0 |
| HB |
CB |
CG1 |
HG13 |
306.9 |
295.0 |
| HB |
CB |
CG2 |
HG21 |
298.9 |
60.0 |
| HB |
CB |
CG2 |
HG22 |
58.9 |
179.9 |
| HB |
CB |
CG2 |
HG23 |
178.9 |
300.0 |
| CD1 |
CG1 |
CB |
CG2 |
307.8 |
295.0 |
| CD1 |
CG1 |
CB |
HB |
66.9 |
55.0 |
| CB |
CG1 |
CD1 |
HG12 |
120.0 |
120.0 |
| CB |
CG1 |
CD1 |
HG13 |
240.0 |
240.0 |
| HG12 |
CG1 |
CD1 |
HG13 |
120.0 |
120.1 |
| HD11 |
CD1 |
CG1 |
HD12 |
240.0 |
240.0 |
| HD11 |
CD1 |
CG1 |
HD13 |
120.0 |
120.0 |
| HD12 |
CD1 |
CG1 |
HD13 |
240.0 |
240.1 |
| HG12 |
CG1 |
CB |
CG2 |
67.8 |
55.1 |
| HG12 |
CG1 |
CB |
HB |
186.9 |
175.0 |
| CB |
CG1 |
HG12 |
CD1 |
237.1 |
240.0 |
| CB |
CG1 |
HG12 |
HG13 |
118.5 |
119.9 |
| CD1 |
CG1 |
HG12 |
HG13 |
241.5 |
239.9 |
| HG12 |
CG1 |
CD1 |
HD11 |
60.0 |
180.0 |
| HG12 |
CG1 |
CD1 |
HD12 |
180.0 |
300.0 |
| HG12 |
CG1 |
CD1 |
HD13 |
300.0 |
60.0 |
| HG13 |
CG1 |
CB |
CG2 |
187.8 |
175.0 |
| HG13 |
CG1 |
CB |
HB |
306.9 |
295.0 |
| CB |
CG1 |
HG13 |
CD1 |
122.9 |
120.0 |
| CB |
CG1 |
HG13 |
HG12 |
241.5 |
240.1 |
| CD1 |
CG1 |
HG13 |
HG12 |
118.5 |
120.1 |
| HG13 |
CG1 |
CD1 |
HD11 |
300.0 |
60.0 |
| HG13 |
CG1 |
CD1 |
HD12 |
60.0 |
180.0 |
| HG13 |
CG1 |
CD1 |
HD13 |
180.0 |
299.9 |
| HG21 |
CG2 |
CB |
HB |
298.9 |
60.0 |
| CB |
CG2 |
HG21 |
HG22 |
120.0 |
120.0 |
| CB |
CG2 |
HG21 |
HG23 |
240.0 |
239.9 |
| HG22 |
CG2 |
HG21 |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HB |
58.9 |
179.9 |
| CB |
CG2 |
HG22 |
HG21 |
240.0 |
240.1 |
| CB |
CG2 |
HG22 |
HG23 |
120.0 |
120.1 |
| HG21 |
CG2 |
HG22 |
HG23 |
240.0 |
240.0 |
| HG23 |
CG2 |
CB |
HB |
178.9 |
300.0 |
| CB |
CG2 |
HG23 |
HG21 |
120.0 |
120.0 |
| CB |
CG2 |
HG23 |
HG22 |
240.1 |
239.9 |
| HG21 |
CG2 |
HG23 |
HG22 |
120.0 |
119.9 |
| HD11 |
CD1 |
CG1 |
HG12 |
60.0 |
180.0 |
| HD11 |
CD1 |
CG1 |
HG13 |
300.0 |
60.0 |
| CG1 |
CD1 |
HD11 |
HD12 |
120.0 |
120.0 |
| CG1 |
CD1 |
HD11 |
HD13 |
240.0 |
240.0 |
| HD12 |
CD1 |
HD11 |
HD13 |
120.0 |
119.9 |
| HD12 |
CD1 |
CG1 |
HG12 |
180.0 |
300.0 |
| HD12 |
CD1 |
CG1 |
HG13 |
60.0 |
180.0 |
| CG1 |
CD1 |
HD12 |
HD11 |
240.0 |
240.0 |
| CG1 |
CD1 |
HD12 |
HD13 |
120.0 |
120.0 |
| HD11 |
CD1 |
HD12 |
HD13 |
240.0 |
240.0 |
| HD13 |
CD1 |
CG1 |
HG12 |
300.0 |
60.0 |
| HD13 |
CD1 |
CG1 |
HG13 |
180.0 |
299.9 |
| CG1 |
CD1 |
HD13 |
HD11 |
120.0 |
120.0 |
| CG1 |
CD1 |
HD13 |
HD12 |
240.0 |
240.0 |
| HD11 |
CD1 |
HD13 |
HD12 |
120.0 |
120.0 |
| HXT |
OXT |
C |
H14 |
338.3 |
60.0 |
| H14 |
C |
CA |
CB |
171.1 |
305.0 |
| H14 |
C |
CA |
HA |
290.7 |
65.0 |
| CA |
C |
H14 |
O |
263.2 |
120.0 |
| CA |
C |
H14 |
OXT |
104.8 |
240.0 |
| O |
C |
H14 |
OXT |
201.7 |
120.0 |
| H14 |
C |
O |
H15 |
22.4 |
180.0 |
| H14 |
C |
OXT |
HXT |
338.3 |
60.0 |
| H15 |
O |
C |
OXT |
358.2 |
300.0 |
| H15 |
O |
C |
H14 |
22.4 |
180.0 |