Atom Nomenclature for IHZ

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for IHZ

Atom Name (V3) Atom Name (V2)
FAE FAE
CBD CBD
FAF FAF
FAG FAG
CBB CBB
CAP CAP
CAK CAK
CAH CAH
CAI CAI
CAX CAX
NAS NAS
CAV CAV
OAD OAD
CAZ CAZ
CAQ CAQ
CAL CAL
CAJ CAJ
CAW CAW
CAA CAA
CBC CBC
NAT NAT
CAY CAY
CAO CAO
CAM CAM
NAR NAR
CAN CAN
CBA CBA
CAU CAU
OAC OAC
NAB NAB
HAP HAP
HAK HAK
HAH HAH
HAI HAI
HNAS HNAS
HAQ HAQ
HAL HAL
HAJ HAJ
HAA HAA
HAAA HAAA
HAAB HAAB
HNAT HNAT
HAO HAO
HAM HAM
HAN HAN
HNAB HNAB
HNAA HNAA