PDB Chemical Component IHM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IHM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O17 |
N37 |
1.235 |
1.416 |
| N37 |
C36 |
1.434 |
1.320 |
| N37 |
C38 |
1.439 |
1.320 |
| C36 |
C35 |
1.416 |
1.382 |
| C38 |
C39 |
1.417 |
1.381 |
| C35 |
C34 |
1.456 |
1.386 |
| C27 |
C28 |
1.450 |
1.381 |
| C27 |
C26 |
1.453 |
1.382 |
| C39 |
C34 |
1.445 |
1.387 |
| C28 |
C23 |
1.462 |
1.393 |
| C26 |
C25 |
1.466 |
1.389 |
| C34 |
C32 |
1.499 |
1.506 |
| C19 |
C20 |
1.460 |
1.408 |
| C19 |
C18 |
1.406 |
1.351 |
| O31 |
C30 |
1.258 |
1.212 |
| C23 |
C20 |
1.470 |
1.485 |
| C23 |
C24 |
1.442 |
1.392 |
| C20 |
N21 |
1.362 |
1.317 |
| C25 |
C24 |
1.460 |
1.386 |
| C25 |
N29 |
1.417 |
1.399 |
| C18 |
N22 |
1.411 |
1.351 |
| C30 |
N29 |
1.405 |
1.349 |
| C30 |
C33 |
1.510 |
1.507 |
| N21 |
N22 |
1.338 |
1.401 |
| N22 |
C16 |
1.480 |
1.465 |
| C32 |
C16 |
1.591 |
1.530 |
| C16 |
C04 |
1.507 |
1.507 |
| C04 |
C05 |
1.430 |
1.382 |
| C04 |
C03 |
1.444 |
1.382 |
| C05 |
C06 |
1.428 |
1.386 |
| C03 |
C02 |
1.424 |
1.382 |
| C06 |
O11 |
1.380 |
1.361 |
| C06 |
C01 |
1.453 |
1.392 |
| C12 |
O11 |
1.453 |
1.429 |
| C12 |
C13 |
1.487 |
1.529 |
| C02 |
C01 |
1.483 |
1.386 |
| C01 |
O07 |
1.421 |
1.359 |
| C15 |
C13 |
1.452 |
1.530 |
| C15 |
C14 |
1.524 |
1.530 |
| C13 |
C14 |
1.513 |
1.530 |
| O07 |
C08 |
1.421 |
1.429 |
| F10 |
C08 |
1.382 |
1.399 |
| C08 |
F09 |
1.368 |
1.400 |
| C02 |
H1 |
1.080 |
1.080 |
| C03 |
H2 |
1.080 |
1.080 |
| C05 |
H3 |
1.080 |
1.080 |
| C08 |
H4 |
1.100 |
1.090 |
| C12 |
H5 |
1.100 |
1.090 |
| C12 |
H6 |
1.100 |
1.090 |
| C13 |
H7 |
1.100 |
1.091 |
| C14 |
H8 |
1.100 |
1.090 |
| C14 |
H9 |
1.100 |
1.090 |
| C15 |
H10 |
1.100 |
1.089 |
| C15 |
H11 |
1.099 |
1.090 |
| C16 |
H12 |
1.099 |
1.090 |
| C18 |
H14 |
1.080 |
1.080 |
| C19 |
H15 |
1.080 |
1.080 |
| C24 |
H16 |
1.080 |
1.080 |
| C26 |
H17 |
1.080 |
1.080 |
| C27 |
H18 |
1.080 |
1.079 |
| C28 |
H19 |
1.080 |
1.080 |
| N29 |
H20 |
1.000 |
0.971 |
| C32 |
H21 |
1.100 |
1.090 |
| C32 |
H22 |
1.100 |
1.090 |
| C33 |
H23 |
1.100 |
1.090 |
| C33 |
H24 |
1.100 |
1.090 |
| C33 |
H25 |
1.100 |
1.090 |
| C35 |
H26 |
1.080 |
1.080 |
| C36 |
H27 |
1.080 |
1.080 |
| C38 |
H28 |
1.080 |
1.080 |
| C39 |
H29 |
1.080 |
1.080 |
Bond Angles for IHM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O17 |
N37 |
C36 |
120.4 |
119.2 |
| O17 |
N37 |
C38 |
120.5 |
119.1 |
| N37 |
C36 |
H27 |
119.5 |
119.6 |
| N37 |
C38 |
C39 |
120.9 |
120.7 |
| N37 |
C38 |
H28 |
119.5 |
119.6 |
| C36 |
C35 |
H26 |
120.2 |
120.4 |
| C39 |
C38 |
H28 |
119.6 |
119.6 |
| C38 |
C39 |
H29 |
120.1 |
120.4 |
| C28 |
C27 |
H18 |
119.6 |
119.9 |
| C27 |
C28 |
H19 |
120.2 |
119.9 |
| C27 |
C26 |
H17 |
120.1 |
119.9 |
| C26 |
C25 |
N29 |
123.4 |
120.0 |
| C34 |
C32 |
H21 |
110.0 |
109.5 |
| C34 |
C32 |
H22 |
110.0 |
109.5 |
| C19 |
C20 |
N21 |
109.3 |
107.9 |
| C20 |
C19 |
H15 |
127.5 |
126.1 |
| C19 |
C18 |
N22 |
106.5 |
108.0 |
| C19 |
C18 |
H14 |
126.8 |
126.1 |
| O31 |
C30 |
C33 |
120.8 |
120.0 |
| C23 |
C24 |
H16 |
119.3 |
120.1 |
| C20 |
N21 |
N22 |
107.9 |
108.1 |
| C25 |
C24 |
H16 |
119.4 |
120.1 |
| C25 |
N29 |
H20 |
115.3 |
120.0 |
| C18 |
N22 |
N21 |
111.4 |
108.1 |
| N22 |
C18 |
H14 |
126.7 |
126.0 |
| C30 |
N29 |
H20 |
115.3 |
119.9 |
| C30 |
C33 |
H23 |
109.5 |
109.5 |
| C30 |
C33 |
H24 |
109.5 |
109.4 |
| C30 |
C33 |
H25 |
109.5 |
109.5 |
| N22 |
C16 |
H12 |
107.3 |
109.4 |
| C32 |
C16 |
H12 |
106.1 |
109.5 |
| C04 |
C05 |
C06 |
121.8 |
120.0 |
| C04 |
C05 |
H3 |
119.1 |
120.0 |
| C04 |
C03 |
H2 |
120.2 |
119.9 |
| C05 |
C06 |
O11 |
125.6 |
120.0 |
| C06 |
C05 |
H3 |
119.1 |
120.0 |
| C03 |
C02 |
H1 |
119.7 |
120.0 |
| C06 |
C01 |
O07 |
116.2 |
120.1 |
| C12 |
C13 |
C14 |
111.7 |
117.5 |
| C13 |
C12 |
H5 |
110.2 |
109.5 |
| C13 |
C12 |
H6 |
110.2 |
109.4 |
| C12 |
C13 |
H7 |
111.1 |
115.5 |
| C02 |
C01 |
O07 |
125.1 |
120.1 |
| C01 |
O07 |
C08 |
125.2 |
117.0 |
| C15 |
C13 |
H7 |
111.6 |
117.5 |
| C15 |
C14 |
H8 |
120.4 |
117.5 |
| C15 |
C14 |
H9 |
120.5 |
117.5 |
| C14 |
C13 |
H7 |
110.7 |
117.5 |
| C13 |
C14 |
H8 |
120.4 |
117.5 |
| C13 |
C14 |
H9 |
120.5 |
117.5 |
| O07 |
C08 |
F09 |
113.8 |
109.5 |
| O07 |
C08 |
H4 |
108.0 |
109.5 |
| F10 |
C08 |
H4 |
108.6 |
109.5 |
| F09 |
C08 |
H4 |
108.8 |
109.4 |
| H5 |
C12 |
H6 |
109.4 |
109.5 |
| H8 |
C14 |
H9 |
109.5 |
115.5 |
| H10 |
C15 |
H11 |
109.5 |
115.6 |
| H21 |
C32 |
H22 |
109.5 |
109.4 |
| H23 |
C33 |
H24 |
109.5 |
109.5 |
| H23 |
C33 |
H25 |
109.4 |
109.4 |
| H24 |
C33 |
H25 |
109.5 |
109.5 |
Torsion Angles for IHM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O17 |
N37 |
C36 |
H27 |
0.4 |
0.1 |
| O17 |
N37 |
C38 |
C39 |
179.6 |
179.7 |
| O17 |
N37 |
C38 |
H28 |
359.6 |
360.0 |
| O17 |
N37 |
C36 |
C38 |
180.2 |
180.0 |
| N37 |
C36 |
C35 |
H26 |
179.9 |
180.0 |
| O17 |
N37 |
C38 |
C36 |
179.8 |
180.0 |
| C38 |
N37 |
C36 |
H27 |
180.2 |
180.1 |
| C39 |
C38 |
N37 |
H28 |
180.0 |
179.7 |
| N37 |
C38 |
C39 |
H29 |
179.9 |
180.0 |
| O17 |
N37 |
C36 |
C35 |
180.5 |
180.0 |
| N37 |
C38 |
C39 |
H28 |
180.0 |
180.3 |
| C35 |
C34 |
C32 |
H21 |
55.0 |
330.0 |
| C35 |
C34 |
C32 |
H22 |
175.7 |
210.0 |
| C28 |
C27 |
C26 |
H17 |
179.8 |
179.8 |
| C27 |
C26 |
C25 |
N29 |
179.8 |
180.1 |
| C39 |
C34 |
C32 |
H21 |
234.4 |
149.7 |
| C39 |
C34 |
C32 |
H22 |
355.0 |
29.8 |
| C28 |
C23 |
C24 |
H16 |
179.9 |
180.2 |
| C26 |
C25 |
C24 |
H16 |
180.1 |
180.0 |
| C26 |
C25 |
N29 |
H20 |
50.4 |
35.2 |
| C34 |
C32 |
C16 |
H12 |
63.5 |
305.0 |
| H21 |
C32 |
C34 |
H22 |
239.4 |
120.0 |
| C20 |
C19 |
C18 |
N22 |
0.1 |
360.0 |
| C20 |
C19 |
C18 |
H14 |
180.1 |
179.8 |
| C19 |
C20 |
N21 |
N22 |
0.2 |
0.0 |
| C19 |
C18 |
N22 |
N21 |
360.0 |
0.0 |
| N22 |
C18 |
C19 |
H14 |
180.0 |
180.2 |
| O31 |
C30 |
N29 |
H20 |
179.8 |
175.3 |
| O31 |
C30 |
C33 |
H23 |
360.0 |
269.9 |
| O31 |
C30 |
C33 |
H24 |
120.0 |
30.0 |
| O31 |
C30 |
C33 |
H25 |
240.0 |
150.0 |
| C23 |
C20 |
C19 |
H15 |
359.5 |
0.0 |
| C25 |
C24 |
C23 |
H16 |
180.0 |
179.9 |
| N21 |
C20 |
C19 |
H15 |
179.8 |
180.1 |
| C18 |
N22 |
N21 |
C20 |
359.9 |
360.0 |
| C23 |
C24 |
C25 |
H16 |
180.0 |
180.1 |
| N29 |
C25 |
C24 |
H16 |
0.3 |
359.9 |
| C30 |
N29 |
C25 |
H20 |
180.0 |
180.1 |
| C19 |
C18 |
N22 |
H14 |
180.0 |
179.8 |
| C20 |
N21 |
N22 |
C18 |
359.9 |
360.0 |
| C18 |
N22 |
C16 |
H12 |
22.8 |
155.4 |
| C25 |
N29 |
C30 |
H20 |
180.0 |
179.9 |
| C33 |
C30 |
N29 |
H20 |
360.0 |
355.3 |
| H23 |
C33 |
C30 |
H24 |
240.0 |
239.9 |
| H23 |
C33 |
C30 |
H25 |
120.0 |
120.0 |
| H24 |
C33 |
C30 |
H25 |
240.0 |
240.0 |
| N21 |
N22 |
C18 |
H14 |
180.0 |
180.2 |
| N21 |
N22 |
C16 |
H12 |
202.8 |
335.1 |
| C32 |
C16 |
N22 |
H12 |
115.8 |
120.0 |
| N22 |
C16 |
C32 |
H12 |
243.5 |
240.0 |
| C16 |
C04 |
C05 |
H3 |
358.9 |
0.3 |
| C16 |
C04 |
C03 |
H2 |
1.0 |
359.7 |
| C05 |
C04 |
C03 |
H2 |
180.1 |
180.0 |
| C04 |
C05 |
C06 |
O11 |
180.5 |
180.0 |
| C06 |
C05 |
C04 |
H3 |
180.0 |
179.7 |
| C04 |
C03 |
C02 |
H1 |
180.2 |
180.0 |
| C04 |
C05 |
C06 |
H3 |
180.0 |
180.3 |
| C05 |
C06 |
C01 |
O07 |
180.8 |
179.7 |
| C03 |
C02 |
C01 |
O07 |
179.1 |
180.0 |
| O11 |
C06 |
C05 |
H3 |
0.5 |
359.7 |
| O11 |
C06 |
C01 |
O07 |
0.3 |
0.3 |
| C02 |
C01 |
C06 |
O07 |
179.6 |
179.7 |
| C06 |
C01 |
O07 |
C08 |
178.9 |
179.7 |
| C15 |
C13 |
C12 |
H7 |
195.6 |
214.3 |
| C14 |
C13 |
C12 |
H7 |
124.1 |
145.6 |
| C12 |
C13 |
C14 |
H8 |
22.8 |
215.0 |
| C12 |
C13 |
C14 |
H9 |
240.1 |
360.0 |
| H5 |
C12 |
C13 |
H6 |
120.9 |
120.0 |
| C06 |
C01 |
C02 |
O07 |
180.5 |
180.3 |
| C02 |
C01 |
O07 |
C08 |
359.3 |
360.0 |
| C01 |
O07 |
C08 |
F09 |
62.0 |
300.0 |
| C01 |
O07 |
C08 |
H4 |
183.0 |
180.1 |
| C15 |
C13 |
C12 |
H5 |
24.2 |
123.6 |
| C15 |
C13 |
C12 |
H6 |
263.3 |
3.7 |
| C12 |
C13 |
C15 |
H7 |
164.4 |
145.0 |
| C14 |
C13 |
C15 |
H7 |
257.4 |
252.5 |
| C15 |
C13 |
C14 |
H8 |
251.3 |
107.5 |
| C15 |
C13 |
C14 |
H9 |
108.7 |
252.4 |
| C14 |
C15 |
C13 |
H7 |
102.6 |
107.5 |
| C15 |
C14 |
C13 |
H7 |
255.8 |
252.5 |
| C13 |
C14 |
C15 |
H8 |
251.4 |
107.5 |
| C13 |
C14 |
C15 |
H9 |
108.7 |
252.6 |
| H8 |
C14 |
C15 |
H9 |
217.3 |
145.1 |
| C14 |
C13 |
C12 |
H5 |
312.8 |
55.0 |
| C14 |
C13 |
C12 |
H6 |
191.9 |
295.0 |
| C12 |
C13 |
C14 |
H7 |
235.7 |
215.0 |
| C15 |
C13 |
C14 |
H7 |
104.2 |
107.5 |
| C15 |
C14 |
C13 |
H8 |
108.7 |
252.5 |
| C15 |
C14 |
C13 |
H9 |
251.3 |
107.6 |
| H8 |
C14 |
C13 |
H9 |
142.7 |
215.1 |
| F10 |
C08 |
O07 |
H4 |
117.8 |
240.0 |
| F09 |
C08 |
O07 |
H4 |
239.1 |
120.0 |
| O07 |
C08 |
F10 |
H4 |
242.6 |
120.0 |
| F09 |
C08 |
F10 |
H4 |
118.2 |
240.0 |
| O07 |
C08 |
F09 |
H4 |
120.5 |
240.0 |
| F10 |
C08 |
F09 |
H4 |
241.9 |
120.0 |
| H1 |
C02 |
C01 |
O07 |
359.1 |
360.0 |
| H2 |
C03 |
C02 |
H1 |
0.3 |
0.1 |
| C04 |
C05 |
H3 |
C06 |
180.0 |
179.7 |
| H3 |
C05 |
C06 |
O11 |
0.5 |
359.7 |
| O07 |
C08 |
H4 |
F09 |
236.0 |
120.0 |
| H5 |
C12 |
C13 |
C14 |
312.8 |
55.0 |
| C13 |
C12 |
H5 |
H6 |
238.7 |
240.1 |
| H5 |
C12 |
C13 |
H7 |
188.6 |
269.3 |
| H6 |
C12 |
C13 |
C14 |
191.9 |
295.0 |
| C13 |
C12 |
H6 |
H5 |
121.3 |
120.0 |
| H6 |
C12 |
C13 |
H7 |
67.7 |
149.4 |
| C12 |
C13 |
H7 |
C14 |
124.7 |
145.7 |
| H7 |
C13 |
C12 |
H5 |
188.6 |
269.3 |
| H7 |
C13 |
C12 |
H6 |
67.7 |
149.4 |
| H7 |
C13 |
C14 |
H8 |
147.2 |
0.0 |
| H7 |
C13 |
C14 |
H9 |
4.5 |
144.9 |
| C15 |
C14 |
H8 |
H9 |
146.3 |
214.2 |
| H8 |
C14 |
C13 |
H7 |
147.2 |
0.0 |
| C13 |
C14 |
H8 |
H9 |
213.7 |
145.6 |
| C15 |
C14 |
H9 |
H8 |
213.7 |
145.7 |
| H9 |
C14 |
C13 |
H7 |
4.5 |
144.9 |
| C13 |
C14 |
H9 |
H8 |
146.3 |
214.4 |
| H10 |
C15 |
C13 |
H7 |
212.4 |
214.9 |
| H10 |
C15 |
C14 |
H8 |
358.9 |
145.0 |
| H10 |
C15 |
C14 |
H9 |
141.6 |
360.0 |
| H11 |
C15 |
C13 |
H7 |
352.9 |
0.0 |
| H11 |
C15 |
C14 |
H8 |
218.4 |
0.0 |
| H11 |
C15 |
C14 |
H9 |
1.1 |
215.0 |
| C19 |
C18 |
H14 |
N22 |
180.0 |
180.2 |
| H14 |
C18 |
N22 |
N21 |
180.0 |
180.2 |
| H15 |
C19 |
C20 |
N21 |
179.8 |
180.1 |
| H15 |
C19 |
C18 |
N22 |
180.1 |
179.9 |
| H15 |
C19 |
C18 |
H14 |
0.1 |
359.7 |
| H17 |
C26 |
C25 |
N29 |
359.8 |
360.0 |
| H18 |
C27 |
C28 |
H19 |
0.2 |
359.6 |
| H18 |
C27 |
C26 |
H17 |
359.8 |
0.3 |
| H19 |
C28 |
C27 |
H18 |
0.2 |
359.6 |
| C34 |
C32 |
H21 |
H22 |
120.9 |
240.0 |
| H21 |
C32 |
C16 |
H12 |
303.8 |
65.0 |
| C34 |
C32 |
H22 |
H21 |
239.1 |
120.0 |
| H22 |
C32 |
C16 |
H12 |
183.2 |
184.9 |
| C30 |
C33 |
H23 |
H24 |
120.0 |
120.0 |
| C30 |
C33 |
H23 |
H25 |
240.0 |
240.0 |
| H24 |
C33 |
H23 |
H25 |
120.0 |
120.0 |
| C30 |
C33 |
H24 |
H23 |
240.0 |
239.9 |
| C30 |
C33 |
H24 |
H25 |
120.0 |
120.0 |
| H23 |
C33 |
H24 |
H25 |
240.0 |
240.0 |
| C30 |
C33 |
H25 |
H23 |
120.0 |
120.0 |
| C30 |
C33 |
H25 |
H24 |
240.0 |
240.1 |
| H23 |
C33 |
H25 |
H24 |
120.0 |
120.0 |
| H27 |
C36 |
C35 |
H26 |
360.0 |
359.9 |
| N37 |
C38 |
H28 |
C39 |
180.0 |
179.7 |
| H28 |
C38 |
C39 |
H29 |
359.9 |
359.7 |
| H29 |
C39 |
C38 |
H28 |
359.9 |
359.7 |