PDB Chemical Component IDS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IDS

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.538	1.529
C1	O1	1.398	1.429
C1	O5	1.398	1.425
C1	H1	1.114	1.090
C2	C3	1.530	1.531
C2	O2	1.414	1.428
C2	H2	1.117	1.091
C3	C4	1.538	1.532
C3	O3	1.411	1.429
C3	H3	1.116	1.089
C4	C5	1.541	1.529
C4	O4	1.421	1.429
C4	H4	1.118	1.090
C5	C6	1.525	1.506
C5	O5	1.412	1.427
C5	H5	1.117	1.090
C6	O6A	1.210	1.208
C6	O6B	1.211	1.342
O1	HO1	0.950	0.967
O2	S	1.562	1.522
O3	HO3	0.942	0.967
O4	HO4	0.950	0.967
O6B	HO6B	0.950	0.966
S	O1S	1.436	1.421
S	O2S	1.431	1.420
S	O3S	1.434	1.521
O3S	HOS3	0.949	0.967

Bond Angles for IDS

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	107.8	109.4
C2	C1	O5	112.4	109.8
C2	C1	H1	109.7	109.5
C1	C2	C3	110.5	109.1
C1	C2	O2	108.4	109.7
C1	C2	H2	111.4	109.5
O1	C1	O5	112.8	109.4
O1	C1	H1	108.9	109.4
C1	O1	HO1	107.8	106.8
O5	C1	H1	105.1	109.4
C1	O5	C5	113.4	107.6
C3	C2	O2	108.4	109.5
C3	C2	H2	108.8	109.5
C2	C3	C4	110.7	108.6
C2	C3	O3	109.8	109.8
C2	C3	H3	109.1	109.7
O2	C2	H2	109.2	109.5
C2	O2	S	128.3	106.8
C4	C3	O3	108.9	109.6
C4	C3	H3	110.8	109.6
C3	C4	C5	110.4	109.1
C3	C4	O4	107.8	109.6
C3	C4	H4	112.8	109.6
O3	C3	H3	107.5	109.6
C3	O3	HO3	108.9	106.8
C5	C4	O4	108.5	109.5
C5	C4	H4	106.7	109.6
C4	C5	C6	114.0	109.5
C4	C5	O5	109.0	109.8
C4	C5	H5	111.3	109.4
O4	C4	H4	110.5	109.5
C4	O4	HO4	107.9	106.8
C6	C5	O5	110.7	109.5
C6	C5	H5	104.0	109.4
C5	C6	O6A	120.6	120.0
C5	C6	O6B	121.6	120.0
O5	C5	H5	107.7	109.4
O6A	C6	O6B	117.8	120.0
C6	O6B	HO6B	121.6	120.0
O2	S	O1S	104.1	105.7
O2	S	O2S	107.7	105.7
O2	S	O3S	105.6	107.4
O1S	S	O2S	112.5	125.4
O1S	S	O3S	112.7	105.8
O2S	S	O3S	113.3	105.8
S	O3S	HOS3	105.7	106.8

Torsion Angles for IDS

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O5	125.0	120.1
O1	C1	C2	H1	241.6	240.1
C2	C1	O1	HO1	180.0	179.9
O5	C1	C2	H1	116.6	120.0
C2	C1	O5	C5	34.5	67.5
C3	C2	C1	O2	241.3	240.1
C3	C2	C1	H2	121.1	119.8
C1	C2	C3	C4	302.9	53.7
C1	C2	C3	O3	182.6	294.0
C1	C2	C3	H3	65.1	173.5
O2	C2	C1	H2	239.7	239.8
C1	C2	O2	S	101.9	115.6
C2	C1	O1	O5	235.3	239.7
C2	C1	O1	H1	119.0	119.9
O1	C1	C2	C3	154.7	58.8
O1	C1	C2	O2	273.3	178.7
O1	C1	C2	H2	33.6	298.9
O5	C1	O1	H1	243.7	240.2
O1	C1	O5	C5	272.3	307.4
C2	C1	O5	O1	122.1	120.1
C2	C1	O5	H1	240.7	239.9
O5	C1	C2	C3	29.7	298.7
O5	C1	C2	O2	148.4	58.6
O5	C1	C2	H2	268.6	178.9
O1	C1	O5	H1	118.5	119.8
O5	C1	O1	HO1	304.7	300.2
C4	C5	O5	C1	287.9	292.5
C6	C5	O5	C1	161.8	172.3
C1	O5	C5	H5	48.8	52.5
C2	C1	H1	O1	242.3	240.1
C2	C1	H1	O5	121.1	120.3
H1	C1	C2	C3	273.1	178.7
H1	C1	C2	O2	31.7	298.6
H1	C1	C2	H2	152.0	58.8
O1	C1	H1	O5	238.8	240.2
H1	C1	O1	HO1	61.0	59.9
H1	C1	O5	C5	153.8	187.6
C3	C2	C1	O1	154.7	58.8
C3	C2	C1	O5	29.7	298.7
C3	C2	C1	H1	273.1	178.7
C1	C2	C3	O2	118.7	120.0
C1	C2	C3	H2	237.4	240.2
O2	C2	C3	H2	118.7	120.1
C3	C2	O2	S	221.8	235.3
C4	C3	C2	O3	120.3	119.8
C4	C3	C2	H3	237.8	240.3
C2	C3	C4	C5	21.9	306.3
C2	C3	C4	O4	140.2	66.2
C2	C3	C4	H4	262.6	186.4
O3	C3	C2	H3	117.5	120.5
C2	C3	O3	HO3	288.2	179.2
O2	C2	C1	O1	273.3	178.7
O2	C2	C1	O5	148.4	58.6
O2	C2	C1	H1	31.7	298.6
C1	C2	O2	C3	240.0	240.3
C1	C2	O2	H2	121.6	120.2
C3	C2	O2	H2	241.6	239.9
O2	C2	C3	C4	184.2	293.7
O2	C2	C3	O3	63.9	173.9
O2	C2	C3	H3	306.4	53.4
C2	O2	S	O1S	191.9	183.0
C2	O2	S	O2S	311.5	317.8
C2	O2	S	O3S	72.9	70.4
H2	C2	C1	O1	33.6	298.9
H2	C2	C1	O5	268.6	178.9
H2	C2	C1	H1	152.0	58.8
C1	C2	H2	C3	122.1	119.6
C1	C2	H2	O2	240.2	239.7
C3	C2	H2	O2	118.1	120.1
H2	C2	C3	C4	65.5	173.6
H2	C2	C3	O3	305.2	53.8
H2	C2	C3	H3	187.7	293.3
H2	C2	O2	S	340.3	355.4
C4	C3	C2	O2	184.2	293.7
C4	C3	C2	H2	65.5	173.6
C2	C3	C4	O3	239.2	240.1
C2	C3	C4	H3	121.2	119.8
O3	C3	C4	H3	242.0	239.7
C4	C3	O3	HO3	166.9	60.0
C5	C4	C3	O4	241.7	240.1
C5	C4	C3	H4	119.3	119.9
C3	C4	C5	C6	163.1	181.3
C3	C4	C5	O5	38.9	61.2
C3	C4	C5	H5	280.3	301.1
O4	C4	C3	H4	237.6	239.8
C3	C4	O4	HO4	180.0	180.5
O3	C3	C2	O2	63.9	173.9
O3	C3	C2	H2	305.2	53.8
C2	C3	O3	C4	121.4	119.2
C2	C3	O3	H3	241.5	239.5
C4	C3	O3	H3	120.1	120.3
O3	C3	C4	C5	142.7	66.2
O3	C3	C4	O4	261.0	186.1
O3	C3	C4	H4	23.3	306.3
H3	C3	C2	O2	306.4	53.4
H3	C3	C2	H2	187.7	293.3
C2	C3	H3	C4	237.8	240.8
C2	C3	H3	O3	118.9	120.6
C4	C3	H3	O3	241.1	239.7
H3	C3	C4	C5	260.7	186.5
H3	C3	C4	O4	19.0	306.4
H3	C3	C4	H4	141.4	66.6
H3	C3	O3	HO3	46.7	299.7
C1	O5	C5	C4	287.9	292.5
C5	C4	C3	O3	142.7	66.2
C5	C4	C3	H3	260.7	186.5
C3	C4	C5	O4	117.9	119.9
C3	C4	C5	H4	237.1	240.1
O4	C4	C5	H4	119.1	120.1
C5	C4	O4	HO4	299.5	300.1
C6	C5	C4	O5	124.2	120.2
C6	C5	C4	H5	242.8	240.2
C4	C5	C6	O6A	40.1	239.8
C4	C5	C6	O6B	219.3	59.6
O5	C5	C4	H5	118.6	120.0
O4	C4	C3	O3	261.0	186.1
O4	C4	C3	H3	19.0	306.4
C3	C4	O4	C5	240.4	240.4
C3	C4	O4	H4	123.8	120.2
C5	C4	O4	H4	243.3	239.8
O4	C4	C5	C6	45.2	61.4
O4	C4	C5	O5	281.0	301.2
O4	C4	C5	H5	162.4	181.2
H4	C4	C3	O3	23.3	306.3
H4	C4	C3	H3	141.4	66.6
C3	C4	H4	C5	121.4	119.6
C3	C4	H4	O4	239.2	239.8
C5	C4	H4	O4	117.7	120.2
H4	C4	C5	C6	286.0	301.3
H4	C4	C5	O5	161.9	181.1
H4	C4	C5	H5	43.2	61.1
H4	C4	O4	HO4	56.2	60.2
C1	O5	C5	C6	161.8	172.3
C6	C5	C4	O4	45.2	61.4
C6	C5	C4	H4	286.0	301.3
C4	C5	C6	O5	236.7	239.6
C4	C5	C6	H5	121.4	119.8
O5	C5	C6	H5	244.7	240.2
O6A	C6	C5	O6B	180.7	180.1
C5	C6	O6B	HO6B	179.9	180.1
C5	O5	C1	H1	153.8	187.6
O5	C5	C4	O4	281.0	301.2
O5	C5	C4	H4	161.9	181.1
C4	C5	O5	C6	126.1	120.2
C4	C5	O5	H5	239.1	240.0
C6	C5	O5	H5	113.0	119.8
O5	C5	C6	O6A	163.3	0.1
O5	C5	C6	O6B	342.6	180.0
H5	C5	C4	O4	162.4	181.2
H5	C5	C4	H4	43.2	61.1
C4	C5	H5	C6	236.9	240.1
C4	C5	H5	O5	119.4	120.3
C6	C5	H5	O5	242.6	240.1
H5	C5	C6	O6A	278.7	119.9
H5	C5	C6	O6B	97.9	299.8
O6A	C6	C5	O5	163.3	0.1
O6A	C6	C5	H5	278.7	119.9
C5	C6	O6A	O6B	179.3	179.9
O6A	C6	O6B	HO6B	359.2	360.0
O6B	C6	C5	O5	342.6	180.0
O6B	C6	C5	H5	97.9	299.8
C5	C6	O6B	O6A	180.7	180.1
HO1	O1	C1	O5	304.7	300.2
HO1	O1	C1	H1	61.0	59.9
S	O2	C2	H2	340.3	355.4
O1S	S	O2	O2S	240.3	225.2
O1S	S	O2	O3S	119.0	112.6
O2S	S	O2	O3S	238.6	247.4
O2	S	O3S	HOS3	180.0	179.9
HO3	O3	C3	H3	46.7	299.7
HO4	O4	C4	H4	56.2	60.2
O2	S	O1S	O2S	116.4	123.1
O2	S	O1S	O3S	246.0	246.2
O2S	S	O1S	O3S	129.6	123.1
O1S	S	O3S	HOS3	66.9	67.4
O2	S	O2S	O1S	245.8	236.9
O2	S	O2S	O3S	116.5	113.7
O1S	S	O2S	O3S	230.6	236.8
O2S	S	O3S	HOS3	297.7	292.5
O2	S	O3S	O1S	113.1	112.6
O2	S	O3S	O2S	242.3	247.4
O1S	S	O3S	O2S	129.2	134.8