PDB Chemical Component ID8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ID8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O16 |
C14 |
1.257 |
1.216 |
C14 |
O15 |
1.260 |
1.348 |
C14 |
C13 |
1.525 |
1.473 |
C13 |
C12 |
1.399 |
1.398 |
C13 |
C8 |
1.512 |
1.404 |
C12 |
C11 |
1.393 |
1.377 |
C11 |
C10 |
1.393 |
1.386 |
C10 |
C9 |
1.400 |
1.379 |
C9 |
C8 |
1.412 |
1.390 |
C8 |
N7 |
1.389 |
1.389 |
N7 |
C6 |
1.360 |
1.397 |
C6 |
C1 |
1.503 |
1.389 |
C6 |
C5 |
1.399 |
1.389 |
C1 |
C17 |
1.513 |
1.507 |
C1 |
C2 |
1.493 |
1.381 |
C5 |
C4 |
1.403 |
1.381 |
C4 |
C3 |
1.396 |
1.383 |
C3 |
C2 |
1.395 |
1.383 |
C2 |
C18 |
1.507 |
1.507 |
O15 |
H15 |
0.950 |
0.967 |
C12 |
H12 |
1.080 |
1.080 |
C11 |
H11 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.081 |
C9 |
H9 |
1.080 |
1.080 |
N7 |
H7 |
1.000 |
0.970 |
C5 |
H5 |
1.080 |
1.080 |
C17 |
H171 |
1.100 |
1.091 |
C17 |
H172 |
1.100 |
1.089 |
C17 |
H173 |
1.100 |
1.090 |
C4 |
H4 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C18 |
H181 |
1.100 |
1.090 |
C18 |
H182 |
1.100 |
1.090 |
C18 |
H183 |
1.100 |
1.091 |
Bond Angles for ID8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O16 |
C14 |
O15 |
120.3 |
120.0 |
O16 |
C14 |
C13 |
119.2 |
120.0 |
O15 |
C14 |
C13 |
120.5 |
120.0 |
C14 |
O15 |
H15 |
109.5 |
117.1 |
C14 |
C13 |
C12 |
118.9 |
120.2 |
C14 |
C13 |
C8 |
121.5 |
120.2 |
C12 |
C13 |
C8 |
119.6 |
119.6 |
C13 |
C12 |
C11 |
120.7 |
119.9 |
C13 |
C12 |
H12 |
119.6 |
120.0 |
C13 |
C8 |
C9 |
116.2 |
119.6 |
C13 |
C8 |
N7 |
117.2 |
120.2 |
C12 |
C11 |
C10 |
120.8 |
120.4 |
C11 |
C12 |
H12 |
119.6 |
120.1 |
C12 |
C11 |
H11 |
119.6 |
119.8 |
C11 |
C10 |
C9 |
121.0 |
120.4 |
C10 |
C11 |
H11 |
119.6 |
119.8 |
C11 |
C10 |
H10 |
119.5 |
119.8 |
C10 |
C9 |
C8 |
121.7 |
120.1 |
C9 |
C10 |
H10 |
119.5 |
119.7 |
C10 |
C9 |
H9 |
119.1 |
120.0 |
C9 |
C8 |
N7 |
126.6 |
120.2 |
C8 |
C9 |
H9 |
119.1 |
119.9 |
C8 |
N7 |
C6 |
118.6 |
120.0 |
C8 |
N7 |
H7 |
120.7 |
119.9 |
N7 |
C6 |
C1 |
122.2 |
120.0 |
N7 |
C6 |
C5 |
118.4 |
120.1 |
C6 |
N7 |
H7 |
120.6 |
120.0 |
C1 |
C6 |
C5 |
117.8 |
119.9 |
C6 |
C1 |
C17 |
121.9 |
120.1 |
C6 |
C1 |
C2 |
118.0 |
119.9 |
C6 |
C5 |
C4 |
121.8 |
119.9 |
C6 |
C5 |
H5 |
119.1 |
120.0 |
C17 |
C1 |
C2 |
120.1 |
120.0 |
C1 |
C17 |
H171 |
109.5 |
109.4 |
C1 |
C17 |
H172 |
109.5 |
109.5 |
C1 |
C17 |
H173 |
109.5 |
109.5 |
C1 |
C2 |
C3 |
119.4 |
120.0 |
C1 |
C2 |
C18 |
121.1 |
120.0 |
C5 |
C4 |
C3 |
122.2 |
120.1 |
C4 |
C5 |
H5 |
119.1 |
120.1 |
C5 |
C4 |
H4 |
118.9 |
120.0 |
C4 |
C3 |
C2 |
120.8 |
120.2 |
C3 |
C4 |
H4 |
118.9 |
120.0 |
C4 |
C3 |
H3 |
119.6 |
119.9 |
C3 |
C2 |
C18 |
119.5 |
120.0 |
C2 |
C3 |
H3 |
119.6 |
119.9 |
C2 |
C18 |
H181 |
109.5 |
109.5 |
C2 |
C18 |
H182 |
109.5 |
109.5 |
C2 |
C18 |
H183 |
109.5 |
109.4 |
H171 |
C17 |
H172 |
109.5 |
109.5 |
H171 |
C17 |
H173 |
109.5 |
109.4 |
H172 |
C17 |
H173 |
109.5 |
109.5 |
H181 |
C18 |
H182 |
109.4 |
109.5 |
H181 |
C18 |
H183 |
109.4 |
109.5 |
H182 |
C18 |
H183 |
109.5 |
109.5 |
Torsion Angles for ID8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O15 |
C14 |
O16 |
C13 |
178.6 |
180.3 |
O16 |
C14 |
O15 |
H15 |
360.0 |
360.0 |
O16 |
C14 |
C13 |
C12 |
324.9 |
177.5 |
O16 |
C14 |
C13 |
C8 |
142.9 |
357.2 |
O16 |
C14 |
O15 |
C13 |
181.4 |
179.7 |
O15 |
C14 |
C13 |
C12 |
146.3 |
357.2 |
O15 |
C14 |
C13 |
C8 |
324.3 |
177.0 |
O16 |
C14 |
C13 |
O15 |
178.6 |
180.3 |
C13 |
C14 |
O15 |
H15 |
178.6 |
180.2 |
C12 |
C13 |
C14 |
C8 |
182.0 |
180.3 |
C14 |
C13 |
C12 |
C11 |
179.4 |
180.0 |
C14 |
C13 |
C12 |
H12 |
359.4 |
360.0 |
C14 |
C13 |
C8 |
C9 |
179.7 |
179.7 |
C14 |
C13 |
C8 |
N7 |
1.4 |
0.0 |
C14 |
C13 |
C12 |
C8 |
178.0 |
179.7 |
C12 |
C13 |
C8 |
C9 |
357.6 |
359.4 |
C12 |
C13 |
C8 |
N7 |
179.3 |
179.8 |
C13 |
C12 |
C11 |
C10 |
359.9 |
360.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H11 |
179.9 |
180.0 |
C14 |
C13 |
C8 |
C12 |
182.1 |
180.3 |
C8 |
C13 |
C12 |
C11 |
1.4 |
0.3 |
C8 |
C13 |
C12 |
H12 |
181.4 |
180.3 |
C10 |
C9 |
C8 |
C13 |
2.2 |
0.7 |
C9 |
C8 |
C13 |
N7 |
178.3 |
179.6 |
C13 |
C8 |
C9 |
H9 |
182.2 |
180.4 |
C13 |
C8 |
N7 |
C6 |
166.9 |
81.1 |
C13 |
C8 |
N7 |
H7 |
346.9 |
261.1 |
C11 |
C12 |
C13 |
C8 |
1.4 |
0.3 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
C9 |
359.9 |
0.1 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
H10 |
179.9 |
179.9 |
C10 |
C11 |
C12 |
H12 |
179.8 |
180.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
C8 |
359.0 |
359.6 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.1 |
C11 |
C10 |
C9 |
H9 |
179.0 |
179.9 |
C13 |
C8 |
C9 |
C10 |
2.2 |
0.7 |
C9 |
C10 |
C11 |
H11 |
179.8 |
180.0 |
C11 |
C10 |
C9 |
H10 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
N7 |
180.3 |
180.3 |
C8 |
C9 |
C10 |
H9 |
180.0 |
179.7 |
C13 |
C8 |
C9 |
N7 |
181.9 |
180.4 |
C8 |
C9 |
C10 |
H10 |
179.0 |
179.7 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.3 |
C9 |
C8 |
N7 |
C6 |
348.8 |
261.5 |
C9 |
C8 |
N7 |
H7 |
168.9 |
81.4 |
C13 |
C8 |
N7 |
C9 |
178.1 |
179.6 |
N7 |
C8 |
C9 |
H9 |
0.3 |
360.0 |
C8 |
N7 |
C6 |
C1 |
61.4 |
185.4 |
C8 |
N7 |
C6 |
C5 |
256.4 |
5.1 |
C6 |
N7 |
C8 |
H7 |
180.0 |
180.0 |
C8 |
N7 |
C6 |
H7 |
180.0 |
180.0 |
C1 |
C6 |
N7 |
C5 |
164.9 |
180.3 |
N7 |
C6 |
C1 |
C17 |
13.4 |
360.0 |
N7 |
C6 |
C1 |
C2 |
192.0 |
180.0 |
N7 |
C6 |
C5 |
C4 |
168.9 |
180.0 |
N7 |
C6 |
C5 |
H5 |
348.9 |
0.0 |
N7 |
C6 |
C1 |
C5 |
195.0 |
179.7 |
C1 |
C6 |
N7 |
H7 |
241.3 |
5.4 |
C1 |
C6 |
C5 |
C4 |
3.3 |
359.7 |
C1 |
C6 |
C5 |
H5 |
183.3 |
179.7 |
C17 |
C1 |
C6 |
C2 |
181.4 |
180.0 |
C6 |
C1 |
C17 |
H171 |
278.6 |
90.0 |
C6 |
C1 |
C17 |
H172 |
38.6 |
210.0 |
C6 |
C1 |
C17 |
H173 |
158.6 |
330.1 |
C6 |
C1 |
C2 |
C3 |
1.2 |
0.0 |
C6 |
C1 |
C2 |
C18 |
181.5 |
180.0 |
N7 |
C6 |
C5 |
C1 |
165.6 |
180.3 |
C5 |
C6 |
N7 |
H7 |
76.4 |
185.1 |
C5 |
C6 |
C1 |
C17 |
178.4 |
180.2 |
C5 |
C6 |
C1 |
C2 |
357.0 |
0.2 |
C6 |
C5 |
C4 |
C3 |
358.2 |
0.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
178.2 |
180.0 |
C17 |
C1 |
C6 |
C5 |
178.4 |
180.2 |
C6 |
C1 |
C17 |
C2 |
178.6 |
180.0 |
C17 |
C1 |
C2 |
C3 |
179.9 |
180.0 |
C17 |
C1 |
C2 |
C18 |
0.1 |
360.0 |
H171 |
C17 |
C1 |
H172 |
240.0 |
240.0 |
H171 |
C17 |
C1 |
H173 |
120.0 |
119.9 |
H172 |
C17 |
C1 |
H173 |
240.0 |
239.9 |
C2 |
C1 |
C6 |
C5 |
357.0 |
0.2 |
C6 |
C1 |
C2 |
C17 |
181.4 |
180.0 |
C2 |
C1 |
C17 |
H171 |
100.0 |
270.0 |
C2 |
C1 |
C17 |
H172 |
220.0 |
30.0 |
C2 |
C1 |
C17 |
H173 |
340.0 |
150.1 |
C4 |
C3 |
C2 |
C1 |
0.3 |
359.7 |
C3 |
C2 |
C1 |
C18 |
179.7 |
180.0 |
C1 |
C2 |
C3 |
H3 |
180.3 |
180.0 |
C1 |
C2 |
C18 |
H181 |
103.8 |
90.0 |
C1 |
C2 |
C18 |
H182 |
223.8 |
210.0 |
C1 |
C2 |
C18 |
H183 |
343.8 |
330.1 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
C2 |
359.9 |
0.2 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
H3 |
179.9 |
179.9 |
C1 |
C2 |
C3 |
C4 |
0.3 |
359.7 |
C3 |
C4 |
C5 |
H5 |
178.2 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C4 |
C3 |
C2 |
C18 |
180.1 |
179.8 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.3 |
C1 |
C2 |
C3 |
C18 |
180.3 |
180.0 |
C2 |
C3 |
C4 |
H4 |
179.9 |
180.3 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.7 |
C3 |
C2 |
C18 |
H181 |
284.1 |
270.0 |
C3 |
C2 |
C18 |
H182 |
44.1 |
30.0 |
C3 |
C2 |
C18 |
H183 |
164.1 |
150.0 |
C1 |
C2 |
C18 |
C3 |
179.7 |
180.0 |
C18 |
C2 |
C3 |
H3 |
0.1 |
0.1 |
H181 |
C18 |
C2 |
H182 |
240.0 |
240.0 |
H181 |
C18 |
C2 |
H183 |
120.0 |
120.0 |
H182 |
C18 |
C2 |
H183 |
240.0 |
240.0 |
H15 |
O15 |
C14 |
C13 |
178.6 |
180.2 |
H12 |
C12 |
C13 |
C8 |
181.4 |
180.3 |
C13 |
C12 |
H12 |
C11 |
180.0 |
180.0 |
H12 |
C12 |
C11 |
C10 |
179.8 |
180.0 |
H12 |
C12 |
C11 |
H11 |
359.9 |
0.0 |
C12 |
C11 |
H11 |
C10 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
H12 |
359.9 |
0.0 |
H11 |
C11 |
C10 |
C9 |
179.8 |
180.0 |
H11 |
C11 |
C10 |
H10 |
359.9 |
359.9 |
C11 |
C10 |
H10 |
C9 |
180.0 |
180.1 |
H10 |
C10 |
C11 |
H11 |
359.9 |
359.9 |
H10 |
C10 |
C9 |
C8 |
179.0 |
179.7 |
H10 |
C10 |
C9 |
H9 |
359.0 |
0.0 |
C10 |
C9 |
H9 |
C8 |
180.0 |
179.7 |
H9 |
C9 |
C10 |
H10 |
359.0 |
0.0 |
H9 |
C9 |
C8 |
N7 |
0.3 |
360.0 |
C8 |
N7 |
H7 |
C6 |
180.0 |
180.0 |
H7 |
N7 |
C6 |
C1 |
241.3 |
5.4 |
H7 |
N7 |
C6 |
C5 |
76.4 |
185.1 |
C6 |
C5 |
H5 |
C4 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
C3 |
178.2 |
180.0 |
H5 |
C5 |
C4 |
H4 |
358.2 |
360.0 |
H171 |
C17 |
C1 |
C2 |
100.0 |
270.0 |
C1 |
C17 |
H171 |
H172 |
120.0 |
120.0 |
C1 |
C17 |
H171 |
H173 |
240.0 |
240.0 |
H172 |
C17 |
H171 |
H173 |
120.0 |
120.0 |
H172 |
C17 |
C1 |
C2 |
220.0 |
30.0 |
C1 |
C17 |
H172 |
H171 |
240.0 |
240.0 |
C1 |
C17 |
H172 |
H173 |
120.0 |
120.1 |
H171 |
C17 |
H172 |
H173 |
240.0 |
240.0 |
H173 |
C17 |
C1 |
C2 |
340.0 |
150.1 |
C1 |
C17 |
H173 |
H171 |
120.0 |
119.9 |
C1 |
C17 |
H173 |
H172 |
240.0 |
240.0 |
H171 |
C17 |
H173 |
H172 |
120.0 |
120.0 |
C5 |
C4 |
H4 |
C3 |
180.0 |
180.1 |
H4 |
C4 |
C5 |
H5 |
358.2 |
360.0 |
H4 |
C4 |
C3 |
C2 |
179.9 |
180.3 |
H4 |
C4 |
C3 |
H3 |
359.9 |
360.0 |
C4 |
C3 |
H3 |
C2 |
180.0 |
180.3 |
H3 |
C3 |
C4 |
H4 |
359.9 |
360.0 |
H3 |
C3 |
C2 |
C18 |
0.1 |
0.1 |
C2 |
C18 |
H181 |
H182 |
120.0 |
120.0 |
C2 |
C18 |
H181 |
H183 |
240.0 |
240.1 |
H182 |
C18 |
H181 |
H183 |
120.0 |
120.0 |
C2 |
C18 |
H182 |
H181 |
240.0 |
240.0 |
C2 |
C18 |
H182 |
H183 |
120.0 |
120.0 |
H181 |
C18 |
H182 |
H183 |
240.1 |
240.0 |
C2 |
C18 |
H183 |
H181 |
120.0 |
120.0 |
C2 |
C18 |
H183 |
H182 |
240.0 |
240.0 |
H181 |
C18 |
H183 |
H182 |
120.0 |
120.0 |