PDB Chemical Component ICC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ICC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O |
C6 |
1.218 |
1.213 |
C6 |
N |
1.338 |
1.334 |
C6 |
C5 |
1.517 |
1.514 |
N |
C1 |
1.461 |
1.472 |
C5 |
C4 |
1.532 |
1.530 |
C4 |
C3 |
1.525 |
1.517 |
C3 |
C2 |
1.522 |
1.518 |
C2 |
C1 |
1.524 |
1.535 |
N |
HN |
1.000 |
0.970 |
C5 |
H5 |
1.100 |
1.090 |
C5 |
H5A |
1.100 |
1.091 |
C4 |
H4 |
1.100 |
1.090 |
C4 |
H4A |
1.100 |
1.090 |
C3 |
H3 |
1.100 |
1.090 |
C3 |
H3A |
1.101 |
1.090 |
C2 |
H2 |
1.099 |
1.090 |
C2 |
H2A |
1.100 |
1.090 |
C1 |
H1 |
1.100 |
1.090 |
C1 |
H1A |
1.100 |
1.089 |
Bond Angles for ICC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C6 |
N |
122.2 |
119.9 |
O |
C6 |
C5 |
119.8 |
119.9 |
N |
C6 |
C5 |
118.0 |
120.2 |
C6 |
N |
C1 |
129.3 |
120.4 |
C6 |
N |
HN |
115.3 |
119.8 |
C6 |
C5 |
C4 |
111.9 |
108.5 |
C6 |
C5 |
H5 |
108.7 |
109.7 |
C6 |
C5 |
H5A |
108.1 |
109.6 |
N |
C1 |
C2 |
107.4 |
108.6 |
C1 |
N |
HN |
115.4 |
119.8 |
N |
C1 |
H1 |
110.2 |
109.6 |
N |
C1 |
H1A |
110.6 |
109.6 |
C5 |
C4 |
C3 |
112.9 |
110.8 |
C4 |
C5 |
H5 |
108.7 |
109.6 |
C4 |
C5 |
H5A |
108.1 |
109.6 |
C5 |
C4 |
H4 |
108.3 |
109.2 |
C5 |
C4 |
H4A |
107.5 |
109.2 |
C4 |
C3 |
C2 |
110.2 |
113.8 |
C3 |
C4 |
H4 |
108.4 |
109.2 |
C3 |
C4 |
H4A |
107.5 |
109.3 |
C4 |
C3 |
H3 |
109.2 |
108.6 |
C4 |
C3 |
H3A |
109.1 |
108.6 |
C3 |
C2 |
C1 |
109.5 |
110.8 |
C2 |
C3 |
H3 |
109.2 |
108.6 |
C2 |
C3 |
H3A |
109.0 |
108.6 |
C3 |
C2 |
H2 |
109.5 |
109.2 |
C3 |
C2 |
H2A |
109.5 |
109.2 |
C1 |
C2 |
H2 |
109.4 |
109.2 |
C1 |
C2 |
H2A |
109.4 |
109.3 |
C2 |
C1 |
H1 |
110.1 |
109.8 |
C2 |
C1 |
H1A |
110.6 |
109.4 |
H5 |
C5 |
H5A |
111.4 |
109.8 |
H4 |
C4 |
H4A |
112.2 |
109.2 |
H3 |
C3 |
H3A |
110.1 |
108.5 |
H2 |
C2 |
H2A |
109.5 |
109.1 |
H1 |
C1 |
H1A |
107.9 |
109.7 |
Torsion Angles for ICC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C6 |
O |
C5 |
179.8 |
180.4 |
O |
C6 |
N |
C1 |
181.0 |
179.7 |
O |
C6 |
N |
HN |
0.9 |
359.6 |
O |
C6 |
C5 |
C4 |
241.9 |
108.8 |
O |
C6 |
C5 |
H5 |
1.9 |
228.5 |
O |
C6 |
C5 |
H5A |
122.9 |
349.1 |
O |
C6 |
N |
C5 |
180.2 |
179.6 |
N |
C6 |
C5 |
C4 |
62.1 |
288.5 |
N |
C6 |
C5 |
H5 |
182.1 |
48.2 |
N |
C6 |
C5 |
H5A |
303.1 |
168.8 |
C6 |
N |
C1 |
C2 |
294.3 |
71.7 |
C1 |
N |
C6 |
HN |
180.0 |
180.0 |
C6 |
N |
C1 |
H1 |
54.3 |
191.7 |
C6 |
N |
C1 |
H1A |
173.5 |
312.2 |
O |
C6 |
C5 |
N |
179.8 |
180.4 |
C5 |
C6 |
N |
C1 |
0.7 |
0.0 |
C5 |
C6 |
N |
HN |
180.7 |
180.0 |
C6 |
C5 |
C4 |
C3 |
279.5 |
84.9 |
C4 |
C5 |
C6 |
H5 |
240.0 |
240.3 |
C4 |
C5 |
C6 |
H5A |
119.0 |
119.7 |
C6 |
C5 |
C4 |
H4 |
39.6 |
205.3 |
C6 |
C5 |
C4 |
H4A |
161.1 |
324.6 |
H5 |
C5 |
C6 |
H5A |
239.0 |
239.4 |
C1 |
N |
C6 |
C5 |
0.7 |
0.0 |
C6 |
N |
C1 |
HN |
180.0 |
180.0 |
C3 |
C2 |
C1 |
N |
85.7 |
273.5 |
N |
C1 |
C2 |
H2 |
325.7 |
153.2 |
N |
C1 |
C2 |
H2A |
205.7 |
33.9 |
C2 |
C1 |
N |
H1 |
240.0 |
240.0 |
C2 |
C1 |
N |
H1A |
120.8 |
119.5 |
H1 |
C1 |
N |
H1A |
240.8 |
239.5 |
C6 |
C5 |
C4 |
H5 |
120.0 |
119.7 |
C6 |
C5 |
C4 |
H5A |
241.0 |
240.3 |
C5 |
C4 |
C3 |
C2 |
72.6 |
293.2 |
C3 |
C4 |
C5 |
H4 |
240.0 |
239.7 |
C3 |
C4 |
C5 |
H4A |
118.5 |
120.4 |
C5 |
C4 |
C3 |
H3 |
192.6 |
54.3 |
C5 |
C4 |
C3 |
H3A |
312.9 |
172.1 |
H5 |
C5 |
C4 |
H5A |
121.0 |
120.6 |
H4 |
C4 |
C5 |
H4A |
238.5 |
240.7 |
C3 |
C4 |
C5 |
H5 |
159.5 |
325.2 |
C3 |
C4 |
C5 |
H5A |
38.5 |
204.6 |
C5 |
C4 |
C3 |
H4 |
120.0 |
120.3 |
C5 |
C4 |
C3 |
H4A |
241.5 |
239.7 |
C4 |
C3 |
C2 |
C1 |
283.0 |
67.1 |
C2 |
C3 |
C4 |
H3 |
240.0 |
238.9 |
C2 |
C3 |
C4 |
H3A |
119.7 |
121.1 |
C4 |
C3 |
C2 |
H2 |
43.0 |
187.4 |
C4 |
C3 |
C2 |
H2A |
163.1 |
306.6 |
H4 |
C4 |
C3 |
H4A |
121.5 |
119.4 |
H3 |
C3 |
C4 |
H3A |
239.7 |
242.2 |
N |
C1 |
C2 |
C3 |
85.7 |
273.5 |
C2 |
C3 |
C4 |
H4 |
312.6 |
172.9 |
C2 |
C3 |
C4 |
H4A |
191.1 |
53.5 |
C4 |
C3 |
C2 |
H3 |
120.0 |
121.1 |
C4 |
C3 |
C2 |
H3A |
240.3 |
238.9 |
C1 |
C2 |
C3 |
H2 |
240.0 |
239.7 |
C1 |
C2 |
C3 |
H2A |
120.0 |
120.5 |
C3 |
C2 |
C1 |
H1 |
325.7 |
153.6 |
C3 |
C2 |
C1 |
H1A |
206.5 |
33.1 |
H3 |
C3 |
C2 |
H3A |
120.3 |
117.8 |
H2 |
C2 |
C3 |
H2A |
240.0 |
240.8 |
C2 |
C1 |
N |
HN |
114.3 |
251.7 |
N |
C1 |
C2 |
H1 |
120.0 |
119.8 |
N |
C1 |
C2 |
H1A |
239.2 |
240.4 |
C1 |
C2 |
C3 |
H3 |
163.1 |
306.0 |
C1 |
C2 |
C3 |
H3A |
42.7 |
188.2 |
C3 |
C2 |
C1 |
H2 |
120.0 |
120.3 |
C3 |
C2 |
C1 |
H2A |
240.0 |
239.6 |
H2 |
C2 |
C1 |
H2A |
120.0 |
119.3 |
H1 |
C1 |
C2 |
H1A |
119.2 |
120.5 |
HN |
N |
C6 |
C5 |
180.7 |
180.0 |
C6 |
N |
HN |
C1 |
180.0 |
180.0 |
HN |
N |
C1 |
C2 |
114.3 |
251.7 |
HN |
N |
C1 |
H1 |
234.3 |
11.7 |
HN |
N |
C1 |
H1A |
353.5 |
132.2 |
C6 |
C5 |
H5 |
C4 |
238.0 |
241.0 |
C6 |
C5 |
H5 |
H5A |
119.0 |
120.5 |
H5 |
C5 |
C4 |
C3 |
159.5 |
325.2 |
C4 |
C5 |
H5 |
H5A |
241.0 |
239.5 |
H5 |
C5 |
C4 |
H4 |
279.5 |
85.6 |
H5 |
C5 |
C4 |
H4A |
41.0 |
204.8 |
C6 |
C5 |
H5A |
C4 |
121.3 |
119.0 |
C6 |
C5 |
H5A |
H5 |
240.6 |
239.5 |
H5A |
C5 |
C4 |
C3 |
38.5 |
204.6 |
C4 |
C5 |
H5A |
H5 |
119.3 |
120.5 |
H5A |
C5 |
C4 |
H4 |
158.5 |
325.0 |
H5A |
C5 |
C4 |
H4A |
280.0 |
84.3 |
C5 |
C4 |
H4 |
C3 |
237.1 |
238.7 |
H4 |
C4 |
C5 |
H5 |
279.5 |
85.6 |
H4 |
C4 |
C5 |
H5A |
158.5 |
325.0 |
C5 |
C4 |
H4 |
H4A |
118.5 |
119.3 |
H4 |
C4 |
C3 |
C2 |
312.6 |
172.9 |
C3 |
C4 |
H4 |
H4A |
241.4 |
240.6 |
H4 |
C4 |
C3 |
H3 |
72.6 |
294.0 |
H4 |
C4 |
C3 |
H3A |
192.9 |
51.8 |
C5 |
C4 |
H4A |
C3 |
121.9 |
121.3 |
H4A |
C4 |
C5 |
H5 |
41.0 |
204.8 |
H4A |
C4 |
C5 |
H5A |
280.0 |
84.3 |
C5 |
C4 |
H4A |
H4 |
241.0 |
240.7 |
H4A |
C4 |
C3 |
C2 |
191.1 |
53.5 |
C3 |
C4 |
H4A |
H4 |
119.1 |
119.4 |
H4A |
C4 |
C3 |
H3 |
311.0 |
174.6 |
H4A |
C4 |
C3 |
H3A |
71.4 |
292.4 |
C4 |
C3 |
H3 |
C2 |
239.4 |
235.8 |
H3 |
C3 |
C4 |
H4 |
72.6 |
294.0 |
H3 |
C3 |
C4 |
H4A |
311.0 |
174.6 |
C4 |
C3 |
H3 |
H3A |
119.7 |
117.9 |
H3 |
C3 |
C2 |
C1 |
163.1 |
306.0 |
C2 |
C3 |
H3 |
H3A |
240.3 |
242.1 |
H3 |
C3 |
C2 |
H2 |
283.1 |
66.3 |
H3 |
C3 |
C2 |
H2A |
43.1 |
185.5 |
C4 |
C3 |
H3A |
C2 |
120.4 |
124.2 |
H3A |
C3 |
C4 |
H4 |
192.9 |
51.8 |
H3A |
C3 |
C4 |
H4A |
71.4 |
292.4 |
C4 |
C3 |
H3A |
H3 |
240.2 |
242.1 |
H3A |
C3 |
C2 |
C1 |
42.7 |
188.2 |
C2 |
C3 |
H3A |
H3 |
119.8 |
117.9 |
H3A |
C3 |
C2 |
H2 |
162.7 |
308.5 |
H3A |
C3 |
C2 |
H2A |
282.8 |
67.7 |
C3 |
C2 |
H2 |
C1 |
239.9 |
238.7 |
H2 |
C2 |
C3 |
H3 |
283.1 |
66.3 |
H2 |
C2 |
C3 |
H3A |
162.7 |
308.5 |
C3 |
C2 |
H2 |
H2A |
120.0 |
119.3 |
C1 |
C2 |
H2 |
H2A |
240.1 |
240.6 |
H2 |
C2 |
C1 |
H1 |
205.7 |
33.3 |
H2 |
C2 |
C1 |
H1A |
86.5 |
272.8 |
C3 |
C2 |
H2A |
C1 |
120.1 |
121.4 |
H2A |
C2 |
C3 |
H3 |
43.1 |
185.5 |
H2A |
C2 |
C3 |
H3A |
282.8 |
67.7 |
C3 |
C2 |
H2A |
H2 |
240.0 |
240.7 |
C1 |
C2 |
H2A |
H2 |
120.0 |
119.3 |
H2A |
C2 |
C1 |
H1 |
85.7 |
274.1 |
H2A |
C2 |
C1 |
H1A |
326.5 |
153.5 |
N |
C1 |
H1 |
C2 |
241.7 |
240.8 |
H1 |
C1 |
N |
HN |
234.3 |
11.7 |
N |
C1 |
H1 |
H1A |
120.9 |
120.5 |
H1 |
C1 |
C2 |
H2 |
205.7 |
33.3 |
H1 |
C1 |
C2 |
H2A |
85.7 |
274.1 |
C2 |
C1 |
H1 |
H1A |
239.2 |
239.7 |
N |
C1 |
H1A |
C2 |
118.9 |
119.0 |
H1A |
C1 |
N |
HN |
353.5 |
132.2 |
N |
C1 |
H1A |
H1 |
239.4 |
239.5 |
H1A |
C1 |
C2 |
H2 |
86.5 |
272.8 |
H1A |
C1 |
C2 |
H2A |
326.5 |
153.5 |
C2 |
C1 |
H1A |
H1 |
120.5 |
120.5 |