PDB Chemical Component IBP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IBP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.520 1.506
C1 O1 1.301 1.342
C1 O2 1.223 1.208
C2 C3 1.535 1.529
C2 C11 1.522 1.507
C2 H21 1.115 1.090
C2 H22 1.115 1.090
C3 C4 1.526 1.530
C3 C5 1.515 1.529
C3 H31 1.115 1.090
C4 H41 1.114 1.089
C4 H42 1.115 1.090
C4 H43 1.116 1.089
C5 H51 1.114 1.090
C5 H52 1.115 1.090
C5 H53 1.116 1.090
C6 C7 1.526 1.529
C6 C8 1.547 1.507
C6 H61 1.115 1.090
C7 H71 1.115 1.091
C7 H72 1.115 1.089
C7 H73 1.115 1.090
C8 C9 1.412 1.382
C8 C13 1.420 1.381
C9 C10 1.415 1.381
C9 H91 1.102 1.080
C10 C11 1.420 1.382
C10 H101 1.103 1.080
C11 C12 1.410 1.382
C12 C13 1.417 1.382
C12 H121 1.103 1.079
C13 H131 1.103 1.080
O1 HO1 0.949 0.967

Bond Angles for IBP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C1 O1 114.4 120.0
C6 C1 O2 123.6 120.0
C1 C6 C7 111.1 109.5
C1 C6 C8 109.0 109.5
C1 C6 H61 110.1 109.4
O1 C1 O2 122.0 120.0
C1 O1 HO1 114.4 120.0
C3 C2 C11 115.0 109.5
C3 C2 H21 110.2 109.4
C3 C2 H22 110.2 109.5
C2 C3 C4 110.1 109.5
C2 C3 C5 111.1 109.5
C2 C3 H31 107.8 109.5
C11 C2 H21 110.2 109.5
C11 C2 H22 110.2 109.5
C2 C11 C10 120.9 120.0
C2 C11 C12 121.8 120.0
H21 C2 H22 100.0 109.4
C4 C3 C5 109.4 109.5
C4 C3 H31 109.6 109.4
C3 C4 H41 110.2 109.5
C3 C4 H42 112.0 109.5
C3 C4 H43 112.0 109.5
C5 C3 H31 108.7 109.5
C3 C5 H51 111.1 109.5
C3 C5 H52 111.6 109.5
C3 C5 H53 111.6 109.5
H41 C4 H42 112.0 109.4
H41 C4 H43 112.0 109.4
H42 C4 H43 98.4 109.5
H51 C5 H52 111.7 109.5
H51 C5 H53 111.6 109.4
H52 C5 H53 98.7 109.4
C7 C6 C8 113.2 109.5
C7 C6 H61 105.5 109.5
C6 C7 H71 111.1 109.4
C6 C7 H72 111.7 109.5
C6 C7 H73 111.6 109.5
C8 C6 H61 107.8 109.5
C6 C8 C9 120.1 120.0
C6 C8 C13 122.7 120.0
H71 C7 H72 111.6 109.5
H71 C7 H73 111.6 109.5
H72 C7 H73 98.8 109.5
C9 C8 C13 117.2 120.0
C8 C9 C10 121.3 120.0
C8 C9 H91 119.3 120.0
C8 C13 C12 121.5 120.0
C8 C13 H131 119.4 120.0
C10 C9 H91 119.5 120.0
C9 C10 C11 121.5 120.0
C9 C10 H101 119.1 120.0
C11 C10 H101 119.4 120.0
C10 C11 C12 117.3 120.0
C11 C12 C13 121.2 120.0
C11 C12 H121 119.1 120.0
C13 C12 H121 119.6 120.0
C12 C13 H131 119.1 120.0

Torsion Angles for IBP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C6 O2 178.9 180.1
C6 C1 O1 HO1 180.0 180.0
C7 C6 C1 C8 234.6 239.9
C7 C6 C1 H61 116.5 120.0
C1 C6 C7 H71 180.0 60.0
C1 C6 C7 H72 305.3 180.0
C1 C6 C7 H73 54.8 300.0
C8 C6 C1 H61 241.9 240.0
C1 C6 C8 C9 102.0 120.0
C1 C6 C8 C13 281.3 299.9
C6 C1 O1 O2 181.1 179.9
O1 C1 C6 C7 138.3 60.0
O1 C1 C6 C8 263.8 180.0
O1 C1 C6 H61 21.8 300.0
C6 C1 O2 O1 178.8 180.1
O2 C1 C6 C7 319.5 239.9
O2 C1 C6 C8 84.9 360.0
O2 C1 C6 H61 203.0 120.0
O2 C1 O1 HO1 358.9 0.1
C11 C2 C3 H21 234.7 240.0
C11 C2 C3 H22 125.3 120.0
C3 C2 C11 C10 257.6 90.0
C3 C2 C11 C12 77.6 269.7
H21 C2 C3 H22 250.6 240.0
C4 C3 C2 C5 121.4 240.0
C4 C3 C2 H31 240.4 120.0
C2 C3 C4 H41 180.0 180.0
C2 C3 C4 H42 305.3 300.0
C2 C3 C4 H43 54.7 60.0
C5 C3 C2 H31 119.0 240.0
C2 C3 C5 H51 180.0 300.0
C2 C3 C5 H52 305.3 60.0
C2 C3 C5 H53 54.7 180.0
C3 C2 C11 H21 125.3 120.0
C3 C2 C11 H22 234.7 240.0
C11 C2 C3 C4 209.7 180.0
C11 C2 C3 C5 88.3 300.0
C11 C2 C3 H31 329.3 60.0
H21 C2 C11 H22 109.4 120.0
C9 C10 C11 C2 180.2 180.0
C2 C11 C10 H101 0.1 360.0
C10 C11 C2 C12 180.0 180.3
C2 C11 C12 C13 179.8 179.8
C2 C11 C12 H121 359.9 0.3
C3 C2 H21 C11 232.0 240.0
C3 C2 H21 H22 116.0 120.0
H21 C2 C3 C4 334.9 300.0
H21 C2 C3 C5 213.6 60.0
H21 C2 C3 H31 94.5 180.0
C11 C2 H21 H22 244.0 240.0
H21 C2 C11 C10 132.3 330.0
H21 C2 C11 C12 312.3 149.7
C3 C2 H22 C11 128.0 120.0
C3 C2 H22 H21 244.0 240.0
H22 C2 C3 C4 84.3 60.0
H22 C2 C3 C5 323.0 180.0
H22 C2 C3 H31 203.9 300.0
C11 C2 H22 H21 116.0 120.0
H22 C2 C11 C10 22.9 210.0
H22 C2 C11 C12 202.9 29.7
C4 C3 C2 C11 209.7 180.0
C4 C3 C2 H21 334.9 300.0
C4 C3 C2 H22 84.3 60.0
C2 C3 C4 C5 237.6 120.0
C2 C3 C4 H31 118.5 240.0
C5 C3 C4 H31 240.9 120.0
C4 C3 C5 H51 58.1 60.0
C4 C3 C5 H52 183.5 180.0
C4 C3 C5 H53 292.9 300.0
H41 C4 C3 H42 234.7 240.0
H41 C4 C3 H43 125.3 120.0
H42 C4 C3 H43 250.6 240.0
C5 C3 C2 C11 88.3 300.0
C5 C3 C2 H21 213.6 60.0
C5 C3 C2 H22 323.0 180.0
C2 C3 C5 C4 121.8 240.0
C2 C3 C5 H31 241.5 120.0
C4 C3 C5 H31 119.7 240.1
C5 C3 C4 H41 302.4 60.0
C5 C3 C4 H42 67.7 180.0
C5 C3 C4 H43 177.1 300.0
H51 C5 C3 H52 234.7 240.0
H51 C5 C3 H53 125.3 120.0
H52 C5 C3 H53 250.6 240.0
H31 C3 C2 C11 329.3 60.0
H31 C3 C2 H21 94.5 180.0
H31 C3 C2 H22 203.9 300.0
C2 C3 H31 C4 240.1 120.0
C2 C3 H31 C5 120.6 240.0
C4 C3 H31 C5 240.5 120.0
H31 C3 C4 H41 61.5 300.0
H31 C3 C4 H42 186.8 60.0
H31 C3 C4 H43 296.2 180.0
H31 C3 C5 H51 298.5 179.9
H31 C3 C5 H52 63.8 299.9
H31 C3 C5 H53 173.2 60.0
H41 C4 C3 C5 302.4 60.0
H41 C4 C3 H31 61.5 300.0
C3 C4 H41 H42 125.3 120.0
C3 C4 H41 H43 234.7 240.0
H42 C4 H41 H43 109.4 120.0
H42 C4 C3 C5 67.7 180.0
H42 C4 C3 H31 186.8 60.0
C3 C4 H42 H41 235.7 240.0
C3 C4 H42 H43 117.9 120.0
H41 C4 H42 H43 242.2 240.0
H43 C4 C3 C5 177.1 300.0
H43 C4 C3 H31 296.2 180.0
C3 C4 H43 H41 124.3 120.0
C3 C4 H43 H42 242.1 240.0
H41 C4 H43 H42 117.8 120.0
H51 C5 C3 H31 298.5 179.9
C3 C5 H51 H52 125.3 120.0
C3 C5 H51 H53 234.8 240.0
H52 C5 H51 H53 109.5 120.0
H52 C5 C3 H31 63.8 299.9
C3 C5 H52 H51 235.0 240.0
C3 C5 H52 H53 117.4 120.1
H51 C5 H52 H53 242.5 240.0
H53 C5 C3 H31 173.2 60.0
C3 C5 H53 H51 125.0 120.0
C3 C5 H53 H52 242.5 240.0
H51 C5 H53 H52 117.6 120.0
C7 C6 C1 O1 138.3 60.0
C7 C6 C1 O2 319.5 239.9
C1 C6 C7 C8 123.0 120.0
C1 C6 C7 H61 240.7 240.0
C8 C6 C7 H61 117.7 120.0
C7 C6 C8 C9 226.2 240.1
C7 C6 C8 C13 45.4 60.0
H71 C7 C6 H72 234.7 240.0
H71 C7 C6 H73 125.2 120.0
H72 C7 C6 H73 250.5 240.0
C8 C6 C1 O1 263.8 180.0
C8 C6 C1 O2 84.9 360.0
C1 C6 C8 C7 235.8 240.0
C1 C6 C8 H61 119.5 120.0
C7 C6 C8 H61 243.7 240.0
C8 C6 C7 H71 57.0 300.0
C8 C6 C7 H72 182.2 60.0
C8 C6 C7 H73 291.7 180.0
C9 C8 C6 C13 180.7 180.1
C6 C8 C9 C10 179.3 179.9
C6 C8 C9 H91 359.3 360.0
C6 C8 C13 C12 180.7 179.8
C6 C8 C13 H131 0.6 0.1
H61 C6 C1 O1 21.8 300.0
H61 C6 C1 O2 203.0 120.0
C1 C6 H61 C7 119.9 120.0
C1 C6 H61 C8 241.2 240.0
C7 C6 H61 C8 121.3 120.0
H61 C6 C7 H71 299.3 180.0
H61 C6 C7 H72 64.6 300.0
H61 C6 C7 H73 174.1 60.0
H61 C6 C8 C9 342.5 0.1
H61 C6 C8 C13 161.8 180.0
H71 C7 C6 C8 57.0 300.0
H71 C7 C6 H61 299.3 180.0
C6 C7 H71 H72 125.3 120.0
C6 C7 H71 H73 234.7 240.0
H72 C7 H71 H73 109.4 120.0
H72 C7 C6 C8 182.2 60.0
H72 C7 C6 H61 64.6 300.0
C6 C7 H72 H71 235.0 240.0
C6 C7 H72 H73 117.6 120.0
H71 C7 H72 H73 242.5 240.0
H73 C7 C6 C8 291.7 180.0
H73 C7 C6 H61 174.1 60.0
C6 C7 H73 H71 125.0 120.0
C6 C7 H73 H72 242.4 240.0
H71 C7 H73 H72 117.5 120.0
C9 C8 C6 H61 342.5 0.1
C6 C8 C9 C13 179.3 179.9
C9 C8 C13 C12 0.0 359.7
C9 C8 C13 H131 179.9 180.0
C10 C9 C8 H91 180.0 180.0
C8 C9 C10 C11 359.9 360.0
C8 C9 C10 H101 180.0 180.0
C13 C8 C6 H61 161.8 180.0
C6 C8 C13 C9 180.7 180.1
C13 C8 C9 C10 0.0 0.0
C13 C8 C9 H91 180.0 180.0
C11 C12 C13 C8 0.0 0.5
C8 C13 C12 H121 180.0 180.0
C12 C13 C8 H131 180.1 179.8
C2 C11 C10 C9 180.2 180.0
C10 C9 C8 C13 0.0 0.0
C8 C9 C10 H91 180.0 180.0
C11 C10 C9 H101 180.0 180.0
C9 C10 C11 C12 0.1 0.3
H91 C9 C8 C13 180.0 180.0
C8 C9 H91 C10 180.0 180.0
H91 C9 C10 C11 179.9 179.9
H91 C9 C10 H101 359.9 359.9
C10 C11 C2 H21 132.3 330.0
C10 C11 C2 H22 22.9 210.0
C2 C11 C10 C12 180.0 179.7
C11 C10 C9 H91 179.9 179.9
C9 C10 C11 H101 180.0 180.0
C10 C11 C12 C13 359.9 359.4
C10 C11 C12 H121 179.9 180.0
H101 C10 C9 H91 359.9 359.9
C9 C10 H101 C11 180.0 180.0
H101 C10 C11 C12 180.1 180.3
C12 C11 C2 H21 312.3 149.7
C12 C11 C2 H22 202.9 29.7
C2 C11 C12 C10 180.0 180.3
C8 C13 C12 C11 0.0 0.5
C12 C11 C10 H101 180.1 180.3
C13 C12 C11 H121 180.0 179.5
C11 C12 C13 H131 180.1 180.3
C8 C13 C12 H131 179.9 180.2
C11 C12 C13 H121 180.0 180.5
C11 C12 H121 C13 180.0 179.5
H121 C12 C13 H131 0.1 359.8
C8 C13 H131 C12 180.1 179.8
H131 C13 C12 H121 0.1 359.8
HO1 O1 C1 O2 358.9 0.1