PDB Chemical Component IBO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IBO
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
CA |
1.489 |
1.525 |
| O2 |
C |
1.317 |
1.229 |
| C |
NA |
1.263 |
1.379 |
| CA |
CB1 |
1.528 |
1.527 |
| CA |
CB2 |
1.501 |
1.528 |
| NA |
HAN1 |
1.021 |
1.015 |
| NA |
HAN2 |
1.020 |
1.015 |
| CA |
HA |
1.115 |
1.098 |
| CB2 |
HB21 |
1.114 |
1.095 |
| CB2 |
HB22 |
1.116 |
1.095 |
| CB2 |
HB23 |
1.115 |
1.095 |
| CB1 |
HB11 |
1.115 |
1.095 |
| CB1 |
HB12 |
1.115 |
1.096 |
| CB1 |
HB13 |
1.115 |
1.095 |
Bond Angles for IBO
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB1 |
114.1 |
111.1 |
| C |
CA |
CB2 |
111.7 |
110.2 |
| C |
CA |
HA |
105.6 |
107.9 |
| C |
NA |
HAN1 |
118.2 |
119.6 |
| C |
NA |
HAN2 |
122.9 |
120.9 |
| CB1 |
CA |
CB2 |
112.5 |
110.4 |
| CB1 |
CA |
HA |
104.7 |
108.2 |
| CA |
CB1 |
HB11 |
110.5 |
110.8 |
| CA |
CB1 |
HB12 |
110.5 |
111.5 |
| CA |
CB1 |
HB13 |
114.1 |
110.8 |
| CB2 |
CA |
HA |
107.4 |
108.9 |
| CA |
CB2 |
HB21 |
111.4 |
110.9 |
| CA |
CB2 |
HB22 |
111.4 |
111.3 |
| CA |
CB2 |
HB23 |
111.7 |
111.1 |
| HAN1 |
NA |
HAN2 |
118.6 |
119.6 |
| HB21 |
CB2 |
HB22 |
99.0 |
107.7 |
| HB21 |
CB2 |
HB23 |
111.4 |
108.3 |
| HB22 |
CB2 |
HB23 |
111.4 |
107.4 |
| HB11 |
CB1 |
HB12 |
99.8 |
107.7 |
| HB11 |
CB1 |
HB13 |
110.5 |
107.9 |
| HB12 |
CB1 |
HB13 |
110.5 |
108.1 |
Torsion Angles for IBO
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB1 |
CA |
C |
CB2 |
129.1 |
237.3 |
| CB1 |
CA |
C |
HA |
245.6 |
118.4 |
| C |
CA |
CB1 |
HB11 |
54.7 |
303.1 |
| C |
CA |
CB1 |
HB12 |
305.3 |
62.9 |
| C |
CA |
CB1 |
HB13 |
180.0 |
183.3 |
| CB2 |
CA |
C |
HA |
116.5 |
241.1 |
| C |
CA |
CB2 |
HB21 |
54.7 |
180.6 |
| C |
CA |
CB2 |
HB22 |
305.3 |
60.7 |
| C |
CA |
CB2 |
HB23 |
180.0 |
301.1 |
| O2 |
C |
CA |
CB1 |
267.8 |
328.4 |
| O2 |
C |
CA |
CB2 |
138.7 |
91.2 |
| O2 |
C |
CA |
HA |
22.2 |
210.0 |
| O2 |
C |
NA |
HAN1 |
180.0 |
180.0 |
| O2 |
C |
NA |
HAN2 |
6.9 |
0.0 |
| NA |
C |
CA |
CB1 |
94.7 |
148.5 |
| NA |
C |
CA |
CB2 |
325.6 |
271.3 |
| NA |
C |
CA |
HA |
209.1 |
30.1 |
| HAN1 |
NA |
C |
HAN2 |
173.1 |
180.0 |
| C |
CA |
CB1 |
CB2 |
231.4 |
122.6 |
| C |
CA |
CB1 |
HA |
115.0 |
241.8 |
| CB2 |
CA |
CB1 |
HA |
243.6 |
119.2 |
| CB1 |
CA |
CB2 |
HB21 |
284.8 |
303.7 |
| CB1 |
CA |
CB2 |
HB22 |
175.4 |
183.8 |
| CB1 |
CA |
CB2 |
HB23 |
50.1 |
64.2 |
| HB11 |
CB1 |
CA |
HB12 |
109.5 |
240.2 |
| HB11 |
CB1 |
CA |
HB13 |
234.7 |
119.7 |
| HB12 |
CB1 |
CA |
HB13 |
125.3 |
239.6 |
| C |
CA |
CB2 |
CB1 |
129.9 |
236.9 |
| C |
CA |
CB2 |
HA |
244.6 |
118.2 |
| CB1 |
CA |
CB2 |
HA |
114.7 |
241.3 |
| CB2 |
CA |
CB1 |
HB11 |
183.4 |
180.4 |
| CB2 |
CA |
CB1 |
HB12 |
73.9 |
300.3 |
| CB2 |
CA |
CB1 |
HB13 |
308.7 |
60.7 |
| HB21 |
CB2 |
CA |
HB22 |
109.4 |
119.9 |
| HB21 |
CB2 |
CA |
HB23 |
234.7 |
239.5 |
| HB22 |
CB2 |
CA |
HB23 |
125.3 |
119.7 |
| C |
NA |
HAN1 |
HAN2 |
186.6 |
180.0 |
| C |
NA |
HAN2 |
HAN1 |
173.0 |
180.0 |
| C |
CA |
HA |
CB1 |
239.2 |
120.2 |
| C |
CA |
HA |
CB2 |
119.4 |
240.3 |
| CB1 |
CA |
HA |
CB2 |
240.2 |
120.1 |
| HA |
CA |
CB1 |
HB11 |
299.7 |
61.3 |
| HA |
CA |
CB1 |
HB12 |
190.3 |
181.1 |
| HA |
CA |
CB1 |
HB13 |
65.0 |
301.5 |
| HA |
CA |
CB2 |
HB21 |
170.1 |
62.4 |
| HA |
CA |
CB2 |
HB22 |
60.7 |
302.5 |
| HA |
CA |
CB2 |
HB23 |
295.4 |
182.9 |
| HB21 |
CB2 |
CA |
HA |
170.1 |
62.4 |
| CA |
CB2 |
HB21 |
HB22 |
242.7 |
238.0 |
| CA |
CB2 |
HB21 |
HB23 |
125.4 |
122.2 |
| HB22 |
CB2 |
HB21 |
HB23 |
242.7 |
244.2 |
| HB22 |
CB2 |
CA |
HA |
60.7 |
302.5 |
| CA |
CB2 |
HB22 |
HB21 |
117.3 |
121.8 |
| CA |
CB2 |
HB22 |
HB23 |
234.5 |
238.1 |
| HB21 |
CB2 |
HB22 |
HB23 |
117.3 |
116.4 |
| HB23 |
CB2 |
CA |
HA |
295.4 |
182.9 |
| CA |
CB2 |
HB23 |
HB21 |
234.7 |
238.0 |
| CA |
CB2 |
HB23 |
HB22 |
125.3 |
122.0 |
| HB21 |
CB2 |
HB23 |
HB22 |
250.6 |
244.0 |
| HB11 |
CB1 |
CA |
CB2 |
183.4 |
180.4 |
| HB11 |
CB1 |
CA |
HA |
299.7 |
61.3 |
| CA |
CB1 |
HB11 |
HB12 |
243.6 |
122.1 |
| CA |
CB1 |
HB11 |
HB13 |
127.3 |
238.6 |
| HB12 |
CB1 |
HB11 |
HB13 |
243.6 |
116.4 |
| HB12 |
CB1 |
CA |
CB2 |
73.9 |
300.3 |
| HB12 |
CB1 |
CA |
HA |
190.3 |
181.1 |
| CA |
CB1 |
HB12 |
HB11 |
116.3 |
238.3 |
| CA |
CB1 |
HB12 |
HB13 |
232.7 |
122.0 |
| HB11 |
CB1 |
HB12 |
HB13 |
116.4 |
243.7 |
| HB13 |
CB1 |
CA |
CB2 |
308.7 |
60.7 |
| HB13 |
CB1 |
CA |
HA |
65.0 |
301.5 |
| CA |
CB1 |
HB13 |
HB11 |
234.7 |
121.4 |
| CA |
CB1 |
HB13 |
HB12 |
125.3 |
237.6 |
| HB11 |
CB1 |
HB13 |
HB12 |
250.5 |
116.2 |