PDB Chemical Component IAV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for IAV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C10 1.333 1.213
C10 N2 1.373 1.348
C10 C9 1.510 1.508
N2 C11 1.474 1.465
N2 HN2 1.000 0.970
C11 C12 1.504 1.508
C11 C13 1.501 1.531
C11 H11 1.100 1.089
C12 O2 1.360 1.343
C12 O3 1.387 1.208
O3 HO3 0.950  
C13 C14 1.540 1.530
C13 C15 1.508 1.530
C13 H13 1.100 1.090
C14 H141 1.100 1.090
C14 H142 1.100 1.090
C14 H143 1.100 1.090
C15 H151 1.099 1.090
C15 H152 1.100 1.090
C15 H153 1.100 1.090
C9 C2 1.506 1.506
C9 HC91 1.100 1.090
C9 HC92 1.100 1.090
C2 C1 1.363 1.342
C2 C7 1.338 1.465
C1 N1 1.367 1.368
C1 HC1 1.080 1.080
N1 C8 1.329 1.376
N1 HN1 1.000 0.970
C8 C6 1.389 1.391
C8 C7 1.398 1.407
C6 C5 1.414 1.377
C6 HC6 1.080 1.080
C7 C3 1.373 1.396
C3 C4 1.407 1.367
C3 HC3 1.080 1.080
C4 C5 1.425 1.388
C4 HC4 1.080 1.080
C5 HC5 1.080 1.080

Bond Angles for IAV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C10 N2 118.7 120.0
O1 C10 C9 116.5 120.0
N2 C10 C9 124.7 120.0
C10 N2 C11 105.7 120.0
C10 N2 HN2 127.2 120.1
C10 C9 C2 118.2 109.5
C10 C9 HC91 104.7 109.5
C10 C9 HC92 106.7 109.5
C11 N2 HN2 127.2 120.0
N2 C11 C12 99.9 109.5
N2 C11 C13 115.5 109.4
N2 C11 H11 110.4 109.5
C12 C11 C13 104.2 109.5
C12 C11 H11 120.7 109.5
C11 C12 O2 119.3 120.0
C11 C12 O3 119.8 120.0
C13 C11 H11 106.5 109.4
C11 C13 C14 111.0 109.5
C11 C13 C15 113.3 109.5
C11 C13 H13 104.5 109.5
O2 C12 O3 120.7 120.0
C12 O3 HO3 109.5  
C14 C13 C15 105.2 109.5
C14 C13 H13 112.7 109.5
C13 C14 H141 109.4 109.5
C13 C14 H142 109.4 109.5
C13 C14 H143 109.5 109.5
C15 C13 H13 110.4 109.5
C13 C15 H151 109.5 109.5
C13 C15 H152 109.5 109.4
C13 C15 H153 109.5 109.4
H141 C14 H142 109.5 109.5
H141 C14 H143 109.5 109.4
H142 C14 H143 109.5 109.4
H151 C15 H152 109.5 109.5
H151 C15 H153 109.4 109.5
H152 C15 H153 109.5 109.5
C2 C9 HC91 104.6 109.5
C2 C9 HC92 106.7 109.5
C9 C2 C1 121.9 126.5
C9 C2 C7 126.2 126.5
HC91 C9 HC92 116.6 109.4
C1 C2 C7 111.6 107.0
C2 C1 N1 104.8 110.0
C2 C1 HC1 127.6 125.0
C2 C7 C8 105.0 106.0
C2 C7 C3 132.2 134.0
N1 C1 HC1 127.6 125.0
C1 N1 C8 110.0 109.9
C1 N1 HN1 125.0 125.0
C8 N1 HN1 125.0 125.1
N1 C8 C6 129.6 133.5
N1 C8 C7 108.3 107.2
C6 C8 C7 122.0 119.3
C8 C6 C5 117.5 119.8
C8 C6 HC6 121.2 120.1
C8 C7 C3 122.6 119.9
C5 C6 HC6 121.2 120.1
C6 C5 C4 118.7 120.7
C6 C5 HC5 120.6 119.7
C7 C3 C4 115.8 119.8
C7 C3 HC3 122.1 120.1
C4 C3 HC3 122.1 120.1
C3 C4 C5 123.2 120.5
C3 C4 HC4 118.4 119.7
C5 C4 HC4 118.4 119.8
C4 C5 HC5 120.7 119.6

Torsion Angles for IAV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 C10 O1 C9 183.3 180.1
O1 C10 N2 C11 12.8 360.0
O1 C10 N2 HN2 192.8 180.0
O1 C10 C9 C2 249.7 0.0
O1 C10 C9 HC91 133.8 120.0
O1 C10 C9 HC92 9.7 240.0
O1 C10 N2 C9 176.4 179.9
N2 C10 C9 C2 66.1 180.0
N2 C10 C9 HC91 310.3 300.0
N2 C10 C9 HC92 186.1 59.9
C11 N2 C10 HN2 180.0 179.9
C10 N2 C11 C12 228.5 275.0
C10 N2 C11 C13 117.4 155.0
C10 N2 C11 H11 356.6 35.1
O1 C10 C9 N2 183.5 180.1
C9 C10 N2 C11 196.4 180.0
C9 C10 N2 HN2 16.4 0.1
C2 C9 C10 HC91 115.9 240.0
C2 C9 C10 HC92 240.0 120.1
C10 C9 C2 C1 248.4 265.0
C10 C9 C2 C7 62.4 84.7
HC91 C9 C10 HC92 124.1 240.1
C11 N2 C10 C9 196.4 180.0
C10 N2 C11 HN2 180.0 180.1
C12 C11 N2 C13 111.0 120.0
C12 C11 N2 H11 231.9 239.9
N2 C11 C12 O2 198.8 180.0
N2 C11 C12 O3 23.9 0.1
C13 C11 N2 H11 120.8 120.0
N2 C11 C13 C14 50.8 65.0
N2 C11 C13 C15 292.7 185.0
N2 C11 C13 H13 172.5 305.0
HN2 N2 C10 C9 16.4 0.1
C10 N2 HN2 C11 180.0 179.9
HN2 N2 C11 C12 48.5 94.9
HN2 N2 C11 C13 297.5 335.0
HN2 N2 C11 H11 176.6 215.0
C12 C11 N2 HN2 48.5 94.9
N2 C11 C12 C13 240.3 240.0
N2 C11 C12 H11 121.0 120.1
C13 C11 C12 H11 240.6 240.0
C12 C11 C13 C14 302.3 305.0
C12 C11 C13 C15 184.2 65.0
C12 C11 C13 H13 64.0 185.0
O2 C12 C11 O3 174.9 179.9
C11 C12 O3 HO3 174.8  
C13 C11 N2 HN2 297.5 335.0
N2 C11 C13 C12 108.4 120.0
N2 C11 C13 H11 237.1 240.0
C12 C11 C13 H11 128.6 120.0
C13 C11 C12 O2 318.4 299.9
C13 C11 C12 O3 143.5 120.0
C14 C13 C11 C15 118.1 240.0
C14 C13 C11 H13 238.3 120.0
C11 C13 C14 H141 262.4 60.0
C11 C13 C14 H142 142.4 180.0
C11 C13 C14 H143 22.4 300.0
C15 C13 C11 H13 120.2 240.0
C11 C13 C15 H151 237.3 300.0
C11 C13 C15 H152 117.3 60.0
C11 C13 C15 H153 357.3 180.0
H11 C11 N2 HN2 176.6 215.0
N2 C11 H11 C12 244.3 240.0
N2 C11 H11 C13 126.1 120.0
C12 C11 H11 C13 241.8 240.0
H11 C11 C12 O2 77.8 59.9
H11 C11 C12 O3 262.9 240.0
H11 C11 C13 C14 173.7 185.0
H11 C11 C13 C15 55.6 305.0
H11 C11 C13 H13 295.4 65.0
O2 C12 C11 C13 318.4 299.9
O2 C12 C11 H11 77.8 59.9
C11 C12 O2 O3 185.2 180.1
O2 C12 O3 HO3 360.0  
O3 C12 C11 C13 143.5 120.0
O3 C12 C11 H11 262.9 240.0
C11 C12 O3 O2 174.8 179.9
C14 C13 C11 H11 173.7 185.0
C11 C13 C14 C15 237.1 120.0
C11 C13 C14 H13 116.8 240.0
C15 C13 C14 H13 239.7 120.0
C14 C13 C15 H151 115.9 60.0
C14 C13 C15 H152 355.9 180.0
C14 C13 C15 H153 235.9 300.0
H141 C14 C13 H142 120.0 240.0
H141 C14 C13 H143 240.0 120.0
H142 C14 C13 H143 120.0 240.0
C15 C13 C11 H11 55.6 305.0
C11 C13 C15 C14 121.4 240.0
C11 C13 C15 H13 243.2 120.0
C14 C13 C15 H13 121.8 240.0
C15 C13 C14 H141 25.3 300.0
C15 C13 C14 H142 265.3 60.0
C15 C13 C14 H143 145.3 180.0
H151 C15 C13 H152 120.0 240.0
H151 C15 C13 H153 240.1 120.0
H152 C15 C13 H153 120.0 240.1
H13 C13 C11 H11 295.4 65.0
C11 C13 H13 C14 239.4 120.0
C11 C13 H13 C15 122.1 240.0
C14 C13 H13 C15 242.7 120.0
H13 C13 C14 H141 145.6 180.0
H13 C13 C14 H142 25.6 300.0
H13 C13 C14 H143 265.6 60.0
H13 C13 C15 H151 354.1 180.0
H13 C13 C15 H152 234.1 300.0
H13 C13 C15 H153 114.1 60.0
H141 C14 C13 C15 25.3 300.0
H141 C14 C13 H13 145.6 180.0
C13 C14 H141 H142 240.0 120.0
C13 C14 H141 H143 120.0 240.0
H142 C14 H141 H143 240.0 119.9
H142 C14 C13 C15 265.3 60.0
H142 C14 C13 H13 25.6 300.0
C13 C14 H142 H141 120.0 240.0
C13 C14 H142 H143 240.0 120.1
H141 C14 H142 H143 120.0 240.1
H143 C14 C13 C15 145.3 180.0
H143 C14 C13 H13 265.6 60.0
C13 C14 H143 H141 240.0 120.0
C13 C14 H143 H142 120.0 240.0
H141 C14 H143 H142 240.0 119.9
H151 C15 C13 H13 354.1 180.0
C13 C15 H151 H152 240.0 120.0
C13 C15 H151 H153 120.0 240.0
H152 C15 H151 H153 240.0 120.0
H152 C15 C13 H13 234.1 300.0
C13 C15 H152 H151 120.0 240.0
C13 C15 H152 H153 240.0 119.9
H151 C15 H152 H153 120.0 239.9
H153 C15 C13 H13 114.1 60.0
C13 C15 H153 H151 240.0 120.0
C13 C15 H153 H152 120.0 240.1
H151 C15 H153 H152 240.0 120.1
C10 C9 C2 HC91 244.1 120.0
C10 C9 C2 HC92 120.0 240.0
HC91 C9 C2 HC92 235.9 120.0
C1 C2 C9 C7 186.0 180.3
C9 C2 C1 N1 181.2 180.0
C9 C2 C1 HC1 1.2 359.9
C9 C2 C7 C8 179.2 179.9
C9 C2 C7 C3 5.2 0.7
C10 C9 HC91 C2 124.9 240.0
C10 C9 HC91 HC92 242.5 120.0
C2 C9 HC91 HC92 117.5 240.0
HC91 C9 C2 C1 4.3 145.0
HC91 C9 C2 C7 178.3 324.7
C10 C9 HC92 C2 232.8 120.0
C10 C9 HC92 HC91 116.4 240.1
C2 C9 HC92 HC91 243.6 120.0
HC92 C9 C2 C1 128.4 25.0
HC92 C9 C2 C7 302.4 204.7
C1 C2 C9 HC91 4.3 145.0
C1 C2 C9 HC92 128.4 25.0
C9 C2 C1 C7 174.8 179.7
C1 C2 C7 C8 353.7 359.6
C1 C2 C7 C3 179.6 180.5
N1 C1 C2 HC1 180.0 180.0
C2 C1 N1 C8 356.0 0.0
C2 C1 N1 HN1 176.0 180.0
C7 C2 C9 HC91 178.3 324.7
C7 C2 C9 HC92 302.4 204.7
C9 C2 C7 C1 185.5 180.3
C7 C2 C1 N1 6.5 0.2
C7 C2 C1 HC1 186.4 180.2
N1 C8 C7 C2 3.6 0.4
C6 C8 C7 C2 180.7 180.1
C8 C7 C2 C3 174.1 179.1
C2 C7 C3 C4 175.6 179.6
C2 C7 C3 HC3 355.6 359.4
N1 C1 C2 C7 6.5 0.2
C2 C1 N1 HC1 180.0 180.0
C8 N1 C1 HN1 180.0 180.1
C1 N1 C8 C6 183.5 180.1
C1 N1 C8 C7 0.3 359.7
HC1 C1 C2 C7 186.4 180.2
C2 C1 HC1 N1 180.0 180.0
HC1 C1 N1 C8 176.0 180.1
HC1 C1 N1 HN1 356.0 360.0
C2 C7 C8 N1 3.6 0.4
C8 N1 C1 HC1 176.0 180.1
C1 N1 C8 HN1 180.0 179.9
C6 C8 N1 C7 183.2 180.4
N1 C8 C6 C5 179.0 179.9
N1 C8 C6 HC6 359.0 359.8
N1 C8 C7 C3 178.4 179.7
HN1 N1 C1 HC1 356.0 360.0
C1 N1 HN1 C8 180.0 180.1
HN1 N1 C8 C6 3.5 0.2
HN1 N1 C8 C7 180.3 179.8
C2 C7 C8 C6 180.7 180.1
C6 C8 N1 HN1 3.5 0.2
N1 C8 C6 C7 176.5 179.6
C6 C8 C7 C3 355.5 359.4
C5 C6 C8 HC6 180.0 180.1
C8 C6 C5 C4 1.1 359.9
C8 C6 C5 HC5 181.1 179.9
C2 C7 C8 C3 185.2 180.7
C7 C8 N1 HN1 180.3 179.8
N1 C8 C7 C6 182.9 180.3
C7 C8 C6 C5 2.5 0.3
C7 C8 C6 HC6 182.5 180.2
C8 C7 C3 C4 2.4 0.6
C8 C7 C3 HC3 182.4 180.3
C5 C6 C8 C7 2.5 0.3
C8 C6 C5 HC6 180.0 179.9
C3 C4 C5 C6 356.8 0.0
C6 C5 C4 HC4 176.8 180.0
C4 C5 C6 HC5 180.0 180.0
HC6 C6 C8 C7 182.5 180.2
C8 C6 HC6 C5 180.0 180.1
HC6 C6 C5 C4 181.1 180.0
HC6 C6 C5 HC5 1.1 0.0
C2 C7 C3 C8 173.2 179.0
C4 C3 C7 HC3 180.0 180.3
C7 C3 C4 C5 1.4 359.7
C7 C3 C4 HC4 181.4 179.7
C6 C5 C4 C3 356.8 0.0
C7 C3 C4 HC3 180.0 179.7
C5 C4 C3 HC4 180.0 180.0
C3 C4 C5 HC5 176.8 180.1
C7 C3 HC3 C4 180.0 180.3
HC3 C3 C4 C5 181.4 180.0
HC3 C3 C4 HC4 1.4 360.0
C4 C5 C6 HC6 181.1 180.0
C6 C5 C4 HC5 180.0 180.0
C5 C4 C3 HC3 181.4 180.0
C3 C4 C5 HC4 180.0 180.0
HC4 C4 C3 HC3 1.4 360.0
C3 C4 HC4 C5 180.0 180.0
HC4 C4 C5 HC5 356.9 0.0
HC5 C5 C6 HC6 1.1 0.0
C6 C5 HC5 C4 180.0 180.0
HC5 C5 C4 HC4 356.9 0.0