PDB Chemical Component I5I
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for I5I
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.383 |
1.416 |
C1 |
C6 |
1.399 |
1.465 |
C1 |
N15 |
1.316 |
1.326 |
C2 |
C3 |
1.376 |
1.388 |
C3 |
C4 |
1.408 |
1.411 |
C3 |
C7 |
1.319 |
1.468 |
C4 |
C5 |
1.365 |
1.400 |
C4 |
O9 |
1.371 |
1.348 |
C5 |
C6 |
1.399 |
1.358 |
C7 |
C8 |
1.327 |
1.355 |
C8 |
O9 |
1.343 |
1.348 |
C8 |
C10 |
1.349 |
1.473 |
C10 |
N11 |
1.335 |
1.373 |
C10 |
N14 |
1.390 |
1.295 |
N11 |
C12 |
1.510 |
1.473 |
C12 |
C13 |
1.547 |
1.541 |
C13 |
N14 |
1.485 |
1.469 |
N15 |
C16 |
1.315 |
1.250 |
C16 |
S17 |
1.644 |
1.553 |
C2 |
H2 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.079 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
N11 |
HN11 |
1.000 |
0.970 |
C12 |
H12 |
1.100 |
1.090 |
C12 |
H12A |
1.100 |
1.090 |
C13 |
H13 |
1.100 |
1.090 |
C13 |
H13A |
1.100 |
1.090 |
Bond Angles for I5I
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
121.3 |
119.0 |
C2 |
C1 |
N15 |
119.0 |
120.5 |
C1 |
C2 |
C3 |
117.4 |
119.2 |
C1 |
C2 |
H2 |
121.3 |
120.4 |
C6 |
C1 |
N15 |
119.7 |
120.5 |
C1 |
C6 |
C5 |
119.7 |
119.9 |
C1 |
C6 |
H6 |
120.2 |
120.0 |
C1 |
N15 |
C16 |
118.0 |
120.0 |
C2 |
C3 |
C4 |
122.8 |
120.9 |
C2 |
C3 |
C7 |
129.9 |
133.5 |
C3 |
C2 |
H2 |
121.3 |
120.4 |
C4 |
C3 |
C7 |
107.4 |
105.6 |
C3 |
C4 |
C5 |
118.7 |
120.3 |
C3 |
C4 |
O9 |
108.4 |
107.4 |
C3 |
C7 |
C8 |
107.0 |
106.0 |
C3 |
C7 |
H7 |
126.5 |
127.0 |
C5 |
C4 |
O9 |
132.8 |
132.3 |
C4 |
C5 |
C6 |
120.1 |
120.6 |
C4 |
C5 |
H5 |
120.0 |
119.7 |
C4 |
O9 |
C8 |
103.4 |
111.0 |
C6 |
C5 |
H5 |
120.0 |
119.7 |
C5 |
C6 |
H6 |
120.2 |
120.0 |
C7 |
C8 |
O9 |
113.7 |
109.9 |
C7 |
C8 |
C10 |
126.1 |
125.0 |
C8 |
C7 |
H7 |
126.5 |
127.0 |
O9 |
C8 |
C10 |
120.0 |
125.1 |
C8 |
C10 |
N11 |
122.9 |
122.9 |
C8 |
C10 |
N14 |
121.6 |
123.0 |
N11 |
C10 |
N14 |
114.7 |
114.1 |
C10 |
N11 |
C12 |
106.4 |
108.4 |
C10 |
N11 |
HN11 |
126.8 |
125.9 |
C10 |
N14 |
C13 |
109.8 |
110.1 |
N11 |
C12 |
C13 |
107.2 |
103.3 |
C12 |
N11 |
HN11 |
126.8 |
125.8 |
N11 |
C12 |
H12 |
110.2 |
110.6 |
N11 |
C12 |
H12A |
110.2 |
110.6 |
C12 |
C13 |
N14 |
101.7 |
104.1 |
C13 |
C12 |
H12 |
110.3 |
110.7 |
C13 |
C12 |
H12A |
110.3 |
110.7 |
C12 |
C13 |
H13 |
112.1 |
110.5 |
C12 |
C13 |
H13A |
112.2 |
110.5 |
N14 |
C13 |
H13 |
112.1 |
110.6 |
N14 |
C13 |
H13A |
112.1 |
110.3 |
N15 |
C16 |
S17 |
121.8 |
179.9 |
H12 |
C12 |
H12A |
108.7 |
110.8 |
H13 |
C13 |
H13A |
106.7 |
110.5 |
Torsion Angles for I5I
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
N15 |
180.7 |
180.3 |
C2 |
C1 |
C6 |
C5 |
1.4 |
0.1 |
C2 |
C1 |
C6 |
H6 |
181.4 |
180.0 |
C2 |
C1 |
N15 |
C16 |
296.3 |
179.9 |
C1 |
C2 |
C3 |
C4 |
359.9 |
0.0 |
C1 |
C2 |
C3 |
C7 |
179.3 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
N15 |
179.3 |
179.7 |
C6 |
C1 |
C2 |
C3 |
359.9 |
360.0 |
C6 |
C1 |
C2 |
H2 |
180.0 |
180.0 |
C6 |
C1 |
N15 |
C16 |
115.5 |
359.6 |
C4 |
C5 |
C6 |
C1 |
357.4 |
359.9 |
C1 |
C6 |
C5 |
H5 |
177.4 |
180.1 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
N15 |
C6 |
180.7 |
180.3 |
N15 |
C1 |
C2 |
C3 |
179.2 |
179.7 |
N15 |
C1 |
C2 |
H2 |
359.2 |
359.7 |
N15 |
C1 |
C6 |
C5 |
182.1 |
180.3 |
N15 |
C1 |
C6 |
H6 |
2.1 |
0.3 |
C1 |
N15 |
C16 |
S17 |
182.9 |
107.0 |
C3 |
C2 |
C1 |
C6 |
359.9 |
360.0 |
C3 |
C2 |
C1 |
N15 |
179.2 |
179.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
C7 |
180.6 |
180.0 |
C2 |
C3 |
C4 |
C5 |
358.9 |
360.0 |
C2 |
C3 |
C4 |
O9 |
178.1 |
180.0 |
C2 |
C3 |
C7 |
C8 |
181.7 |
180.0 |
C2 |
C3 |
C7 |
H7 |
1.7 |
360.0 |
C2 |
C3 |
C4 |
C7 |
179.5 |
180.0 |
C4 |
C3 |
C2 |
H2 |
179.8 |
180.0 |
C4 |
C3 |
C7 |
C8 |
1.2 |
0.0 |
C4 |
C3 |
C7 |
H7 |
181.2 |
180.0 |
C5 |
C4 |
C3 |
O9 |
180.9 |
180.0 |
C3 |
C4 |
C5 |
C6 |
2.4 |
0.1 |
C3 |
C4 |
C5 |
H5 |
182.4 |
179.9 |
C3 |
C4 |
O9 |
C8 |
1.1 |
0.0 |
C2 |
C3 |
C7 |
C4 |
180.5 |
180.0 |
C7 |
C3 |
C2 |
H2 |
359.3 |
360.0 |
C7 |
C3 |
C4 |
C5 |
179.4 |
180.0 |
C7 |
C3 |
C4 |
O9 |
358.5 |
360.0 |
C3 |
C7 |
C8 |
O9 |
359.5 |
0.0 |
C3 |
C7 |
C8 |
C10 |
184.7 |
180.0 |
C8 |
C7 |
C3 |
H7 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
C4 |
357.4 |
359.9 |
C5 |
C4 |
C3 |
C7 |
179.4 |
180.0 |
C3 |
C4 |
C5 |
O9 |
178.8 |
180.0 |
C5 |
C4 |
O9 |
C8 |
180.1 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.2 |
C4 |
C5 |
C6 |
H6 |
177.4 |
179.9 |
O9 |
C4 |
C3 |
C7 |
358.5 |
360.0 |
C3 |
C4 |
O9 |
C5 |
181.1 |
180.0 |
O9 |
C4 |
C5 |
C6 |
183.5 |
180.1 |
O9 |
C4 |
C5 |
H5 |
3.5 |
359.9 |
C7 |
C8 |
O9 |
C4 |
359.6 |
360.0 |
C4 |
O9 |
C8 |
C10 |
174.7 |
180.0 |
C5 |
C6 |
C1 |
N15 |
182.1 |
180.3 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
O9 |
183.5 |
180.1 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.8 |
C3 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
C4 |
O9 |
C8 |
C7 |
359.6 |
360.0 |
O9 |
C8 |
C7 |
C10 |
174.8 |
180.0 |
C7 |
C8 |
C10 |
N11 |
182.3 |
180.0 |
C7 |
C8 |
C10 |
N14 |
13.4 |
359.7 |
C7 |
C8 |
O9 |
C10 |
184.9 |
180.0 |
O9 |
C8 |
C7 |
H7 |
179.5 |
180.0 |
O9 |
C8 |
C10 |
N11 |
7.8 |
359.9 |
O9 |
C8 |
C10 |
N14 |
198.9 |
179.7 |
C7 |
C8 |
C10 |
O9 |
174.5 |
180.1 |
C10 |
C8 |
C7 |
H7 |
4.7 |
360.0 |
N11 |
C10 |
C8 |
N14 |
168.9 |
180.3 |
C8 |
C10 |
N11 |
C12 |
187.2 |
180.0 |
C8 |
C10 |
N11 |
HN11 |
7.2 |
-0.0 |
C8 |
C10 |
N14 |
C13 |
172.8 |
179.9 |
C8 |
C10 |
N11 |
N14 |
190.4 |
179.8 |
N11 |
C10 |
N14 |
C13 |
3.1 |
359.6 |
C10 |
N11 |
C12 |
C13 |
2.1 |
360.0 |
C12 |
N11 |
C10 |
HN11 |
180.0 |
180.0 |
C10 |
N11 |
C12 |
H12 |
122.1 |
118.4 |
C10 |
N11 |
C12 |
H12A |
242.1 |
241.6 |
C8 |
C10 |
N14 |
N11 |
169.7 |
180.2 |
N14 |
C10 |
N11 |
C12 |
356.8 |
0.2 |
N14 |
C10 |
N11 |
HN11 |
176.8 |
180.2 |
C12 |
C13 |
N14 |
C10 |
358.6 |
0.4 |
C10 |
N14 |
C13 |
H13 |
238.6 |
241.6 |
C10 |
N14 |
C13 |
H13A |
118.6 |
119.0 |
C12 |
N11 |
C10 |
N14 |
356.8 |
0.2 |
C10 |
N11 |
C12 |
HN11 |
180.0 |
180.0 |
N11 |
C12 |
C13 |
N14 |
359.6 |
359.8 |
C13 |
C12 |
N11 |
H12 |
240.0 |
241.6 |
C13 |
C12 |
N11 |
H12A |
120.0 |
118.4 |
N11 |
C12 |
C13 |
H13 |
119.6 |
118.7 |
N11 |
C12 |
C13 |
H13A |
239.6 |
241.3 |
H12 |
C12 |
N11 |
H12A |
240.0 |
236.9 |
C10 |
N14 |
C13 |
C12 |
358.6 |
0.4 |
C13 |
C12 |
N11 |
HN11 |
182.1 |
180.0 |
N11 |
C12 |
C13 |
H12 |
120.0 |
118.4 |
N11 |
C12 |
C13 |
H12A |
240.0 |
241.6 |
N14 |
C13 |
C12 |
H13 |
240.0 |
241.1 |
N14 |
C13 |
C12 |
H13A |
120.0 |
118.5 |
H12 |
C12 |
C13 |
H12A |
120.0 |
123.2 |
H13 |
C13 |
C12 |
H13A |
240.0 |
237.3 |
N14 |
C13 |
C12 |
H12 |
239.6 |
241.4 |
N14 |
C13 |
C12 |
H12A |
119.6 |
118.2 |
C12 |
C13 |
N14 |
H13 |
120.0 |
118.8 |
C12 |
C13 |
N14 |
H13A |
240.0 |
241.4 |
H13 |
C13 |
N14 |
H13A |
120.0 |
122.6 |
H2 |
C2 |
C1 |
C6 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
N15 |
359.2 |
359.7 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
179.8 |
180.0 |
H2 |
C2 |
C3 |
C7 |
359.3 |
360.0 |
H5 |
C5 |
C4 |
O9 |
3.5 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.2 |
H5 |
C5 |
C6 |
H6 |
357.4 |
0.1 |
H6 |
C6 |
C1 |
N15 |
2.1 |
0.3 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
357.4 |
0.1 |
C3 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
O9 |
179.5 |
180.0 |
H7 |
C7 |
C8 |
C10 |
4.7 |
360.0 |
HN11 |
N11 |
C10 |
N14 |
176.8 |
180.2 |
C10 |
N11 |
HN11 |
C12 |
180.0 |
180.0 |
HN11 |
N11 |
C12 |
C13 |
182.1 |
180.0 |
HN11 |
N11 |
C12 |
H12 |
302.1 |
298.4 |
HN11 |
N11 |
C12 |
H12A |
62.1 |
61.6 |
N11 |
C12 |
H12 |
C13 |
241.9 |
246.1 |
H12 |
C12 |
N11 |
HN11 |
302.1 |
298.4 |
N11 |
C12 |
H12 |
H12A |
120.9 |
123.0 |
H12 |
C12 |
C13 |
N14 |
239.6 |
241.4 |
C13 |
C12 |
H12 |
H12A |
239.0 |
236.9 |
H12 |
C12 |
C13 |
H13 |
359.6 |
0.2 |
H12 |
C12 |
C13 |
H13A |
119.6 |
122.9 |
N11 |
C12 |
H12A |
C13 |
118.1 |
113.9 |
H12A |
C12 |
N11 |
HN11 |
62.1 |
61.6 |
N11 |
C12 |
H12A |
H12 |
239.1 |
237.0 |
H12A |
C12 |
C13 |
N14 |
119.6 |
118.2 |
C13 |
C12 |
H12A |
H12 |
121.0 |
123.1 |
H12A |
C12 |
C13 |
H13 |
239.6 |
237.1 |
H12A |
C12 |
C13 |
H13A |
359.6 |
359.8 |
C12 |
C13 |
H13 |
N14 |
246.3 |
245.2 |
H13 |
C13 |
C12 |
H12 |
359.6 |
0.2 |
H13 |
C13 |
C12 |
H12A |
239.6 |
237.1 |
C12 |
C13 |
H13 |
H13A |
123.1 |
122.7 |
N14 |
C13 |
H13 |
H13A |
236.9 |
237.5 |
C12 |
C13 |
H13A |
N14 |
113.8 |
114.6 |
H13A |
C13 |
C12 |
H12 |
119.6 |
122.9 |
H13A |
C13 |
C12 |
H12A |
359.6 |
359.8 |
C12 |
C13 |
H13A |
H13 |
236.9 |
237.3 |
N14 |
C13 |
H13A |
H13 |
123.1 |
122.7 |