PDB Chemical Component I5I

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for I5I

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.383 1.416
C1 C6 1.399 1.465
C1 N15 1.316 1.326
C2 C3 1.376 1.388
C3 C4 1.408 1.411
C3 C7 1.319 1.468
C4 C5 1.365 1.400
C4 O9 1.371 1.348
C5 C6 1.399 1.358
C7 C8 1.327 1.355
C8 O9 1.343 1.348
C8 C10 1.349 1.473
C10 N11 1.335 1.373
C10 N14 1.390 1.295
N11 C12 1.510 1.473
C12 C13 1.547 1.541
C13 N14 1.485 1.469
N15 C16 1.315 1.250
C16 S17 1.644 1.553
C2 H2 1.080 1.080
C5 H5 1.080 1.079
C6 H6 1.080 1.080
C7 H7 1.080 1.080
N11 HN11 1.000 0.970
C12 H12 1.100 1.090
C12 H12A 1.100 1.090
C13 H13 1.100 1.090
C13 H13A 1.100 1.090

Bond Angles for I5I

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 121.3 119.0
C2 C1 N15 119.0 120.5
C1 C2 C3 117.4 119.2
C1 C2 H2 121.3 120.4
C6 C1 N15 119.7 120.5
C1 C6 C5 119.7 119.9
C1 C6 H6 120.2 120.0
C1 N15 C16 118.0 120.0
C2 C3 C4 122.8 120.9
C2 C3 C7 129.9 133.5
C3 C2 H2 121.3 120.4
C4 C3 C7 107.4 105.6
C3 C4 C5 118.7 120.3
C3 C4 O9 108.4 107.4
C3 C7 C8 107.0 106.0
C3 C7 H7 126.5 127.0
C5 C4 O9 132.8 132.3
C4 C5 C6 120.1 120.6
C4 C5 H5 120.0 119.7
C4 O9 C8 103.4 111.0
C6 C5 H5 120.0 119.7
C5 C6 H6 120.2 120.0
C7 C8 O9 113.7 109.9
C7 C8 C10 126.1 125.0
C8 C7 H7 126.5 127.0
O9 C8 C10 120.0 125.1
C8 C10 N11 122.9 122.9
C8 C10 N14 121.6 123.0
N11 C10 N14 114.7 114.1
C10 N11 C12 106.4 108.4
C10 N11 HN11 126.8 125.9
C10 N14 C13 109.8 110.1
N11 C12 C13 107.2 103.3
C12 N11 HN11 126.8 125.8
N11 C12 H12 110.2 110.6
N11 C12 H12A 110.2 110.6
C12 C13 N14 101.7 104.1
C13 C12 H12 110.3 110.7
C13 C12 H12A 110.3 110.7
C12 C13 H13 112.1 110.5
C12 C13 H13A 112.2 110.5
N14 C13 H13 112.1 110.6
N14 C13 H13A 112.1 110.3
N15 C16 S17 121.8 179.9
H12 C12 H12A 108.7 110.8
H13 C13 H13A 106.7 110.5

Torsion Angles for I5I

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 N15 180.7 180.3
C2 C1 C6 C5 1.4 0.1
C2 C1 C6 H6 181.4 180.0
C2 C1 N15 C16 296.3 179.9
C1 C2 C3 C4 359.9 0.0
C1 C2 C3 C7 179.3 180.0
C3 C2 C1 H2 180.0 180.0
C2 C1 C6 N15 179.3 179.7
C6 C1 C2 C3 359.9 360.0
C6 C1 C2 H2 180.0 180.0
C6 C1 N15 C16 115.5 359.6
C4 C5 C6 C1 357.4 359.9
C1 C6 C5 H5 177.4 180.1
C5 C6 C1 H6 180.0 180.0
C2 C1 N15 C6 180.7 180.3
N15 C1 C2 C3 179.2 179.7
N15 C1 C2 H2 359.2 359.7
N15 C1 C6 C5 182.1 180.3
N15 C1 C6 H6 2.1 0.3
C1 N15 C16 S17 182.9 107.0
C3 C2 C1 C6 359.9 360.0
C3 C2 C1 N15 179.2 179.7
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 C7 180.6 180.0
C2 C3 C4 C5 358.9 360.0
C2 C3 C4 O9 178.1 180.0
C2 C3 C7 C8 181.7 180.0
C2 C3 C7 H7 1.7 360.0
C2 C3 C4 C7 179.5 180.0
C4 C3 C2 H2 179.8 180.0
C4 C3 C7 C8 1.2 0.0
C4 C3 C7 H7 181.2 180.0
C5 C4 C3 O9 180.9 180.0
C3 C4 C5 C6 2.4 0.1
C3 C4 C5 H5 182.4 179.9
C3 C4 O9 C8 1.1 0.0
C2 C3 C7 C4 180.5 180.0
C7 C3 C2 H2 359.3 360.0
C7 C3 C4 C5 179.4 180.0
C7 C3 C4 O9 358.5 360.0
C3 C7 C8 O9 359.5 0.0
C3 C7 C8 C10 184.7 180.0
C8 C7 C3 H7 180.0 180.0
C1 C6 C5 C4 357.4 359.9
C5 C4 C3 C7 179.4 180.0
C3 C4 C5 O9 178.8 180.0
C5 C4 O9 C8 180.1 180.0
C6 C5 C4 H5 180.0 180.2
C4 C5 C6 H6 177.4 179.9
O9 C4 C3 C7 358.5 360.0
C3 C4 O9 C5 181.1 180.0
O9 C4 C5 C6 183.5 180.1
O9 C4 C5 H5 3.5 359.9
C7 C8 O9 C4 359.6 360.0
C4 O9 C8 C10 174.7 180.0
C5 C6 C1 N15 182.1 180.3
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 O9 183.5 180.1
C4 C5 C6 H5 180.0 179.8
C3 C7 C8 H7 180.0 180.0
C4 O9 C8 C7 359.6 360.0
O9 C8 C7 C10 174.8 180.0
C7 C8 C10 N11 182.3 180.0
C7 C8 C10 N14 13.4 359.7
C7 C8 O9 C10 184.9 180.0
O9 C8 C7 H7 179.5 180.0
O9 C8 C10 N11 7.8 359.9
O9 C8 C10 N14 198.9 179.7
C7 C8 C10 O9 174.5 180.1
C10 C8 C7 H7 4.7 360.0
N11 C10 C8 N14 168.9 180.3
C8 C10 N11 C12 187.2 180.0
C8 C10 N11 HN11 7.2 -0.0
C8 C10 N14 C13 172.8 179.9
C8 C10 N11 N14 190.4 179.8
N11 C10 N14 C13 3.1 359.6
C10 N11 C12 C13 2.1 360.0
C12 N11 C10 HN11 180.0 180.0
C10 N11 C12 H12 122.1 118.4
C10 N11 C12 H12A 242.1 241.6
C8 C10 N14 N11 169.7 180.2
N14 C10 N11 C12 356.8 0.2
N14 C10 N11 HN11 176.8 180.2
C12 C13 N14 C10 358.6 0.4
C10 N14 C13 H13 238.6 241.6
C10 N14 C13 H13A 118.6 119.0
C12 N11 C10 N14 356.8 0.2
C10 N11 C12 HN11 180.0 180.0
N11 C12 C13 N14 359.6 359.8
C13 C12 N11 H12 240.0 241.6
C13 C12 N11 H12A 120.0 118.4
N11 C12 C13 H13 119.6 118.7
N11 C12 C13 H13A 239.6 241.3
H12 C12 N11 H12A 240.0 236.9
C10 N14 C13 C12 358.6 0.4
C13 C12 N11 HN11 182.1 180.0
N11 C12 C13 H12 120.0 118.4
N11 C12 C13 H12A 240.0 241.6
N14 C13 C12 H13 240.0 241.1
N14 C13 C12 H13A 120.0 118.5
H12 C12 C13 H12A 120.0 123.2
H13 C13 C12 H13A 240.0 237.3
N14 C13 C12 H12 239.6 241.4
N14 C13 C12 H12A 119.6 118.2
C12 C13 N14 H13 120.0 118.8
C12 C13 N14 H13A 240.0 241.4
H13 C13 N14 H13A 120.0 122.6
H2 C2 C1 C6 180.0 180.0
H2 C2 C1 N15 359.2 359.7
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 179.8 180.0
H2 C2 C3 C7 359.3 360.0
H5 C5 C4 O9 3.5 359.9
C4 C5 H5 C6 180.0 180.2
H5 C5 C6 H6 357.4 0.1
H6 C6 C1 N15 2.1 0.3
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 H5 357.4 0.1
C3 C7 H7 C8 180.0 180.0
H7 C7 C8 O9 179.5 180.0
H7 C7 C8 C10 4.7 360.0
HN11 N11 C10 N14 176.8 180.2
C10 N11 HN11 C12 180.0 180.0
HN11 N11 C12 C13 182.1 180.0
HN11 N11 C12 H12 302.1 298.4
HN11 N11 C12 H12A 62.1 61.6
N11 C12 H12 C13 241.9 246.1
H12 C12 N11 HN11 302.1 298.4
N11 C12 H12 H12A 120.9 123.0
H12 C12 C13 N14 239.6 241.4
C13 C12 H12 H12A 239.0 236.9
H12 C12 C13 H13 359.6 0.2
H12 C12 C13 H13A 119.6 122.9
N11 C12 H12A C13 118.1 113.9
H12A C12 N11 HN11 62.1 61.6
N11 C12 H12A H12 239.1 237.0
H12A C12 C13 N14 119.6 118.2
C13 C12 H12A H12 121.0 123.1
H12A C12 C13 H13 239.6 237.1
H12A C12 C13 H13A 359.6 359.8
C12 C13 H13 N14 246.3 245.2
H13 C13 C12 H12 359.6 0.2
H13 C13 C12 H12A 239.6 237.1
C12 C13 H13 H13A 123.1 122.7
N14 C13 H13 H13A 236.9 237.5
C12 C13 H13A N14 113.8 114.6
H13A C13 C12 H12 119.6 122.9
H13A C13 C12 H12A 359.6 359.8
C12 C13 H13A H13 236.9 237.3
N14 C13 H13A H13 123.1 122.7