PDB Chemical Component I59

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for I59

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.421 1.361
C1 C6 1.414 1.394
C1 H1 1.103 1.080
C2 C3 1.411 1.405
C2 H2 1.102 1.080
C3 C4 1.475 1.417
C3 C7 1.410 1.405
C4 C5 1.432 1.406
C4 C10 1.435 1.404
C5 C6 1.417 1.361
C5 H5 1.104 1.079
C6 H6 1.103 1.080
C7 C8 1.401 1.361
C7 H7 1.102 1.080
C8 C9 1.429 1.393
C8 H8 1.103 1.080
C9 C10 1.412 1.361
C9 H9 1.103 1.079
C10 C11 1.498 1.506
C11 O12 1.438 1.429
C11 P13 1.828 1.822
C11 H11 1.115 1.089
O12 H12 0.951 0.966
P13 O15 1.560 1.481
P13 O16 1.448 1.609
P13 O17 1.520 1.609
O16 H16 0.950 0.967
O17 H17 0.950 0.967

Bond Angles for I59

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 121.7 120.9
C2 C1 H1 119.5 119.5
C1 C2 C3 118.8 119.7
C1 C2 H2 121.0 120.1
C6 C1 H1 118.9 119.5
C1 C6 C5 120.7 121.0
C1 C6 H6 119.6 119.5
C3 C2 H2 120.2 120.2
C2 C3 C4 120.4 119.4
C2 C3 C7 119.3 121.3
C4 C3 C7 120.4 119.3
C3 C4 C5 119.1 119.3
C3 C4 C10 120.3 119.4
C3 C7 C8 119.0 119.7
C3 C7 H7 120.9 120.1
C5 C4 C10 120.7 121.2
C4 C5 C6 119.4 119.6
C4 C5 H5 120.8 120.2
C4 C10 C9 116.8 119.6
C4 C10 C11 120.7 120.2
C6 C5 H5 119.8 120.2
C5 C6 H6 119.7 119.5
C8 C7 H7 120.2 120.2
C7 C8 C9 120.7 121.0
C7 C8 H8 118.7 119.5
C9 C8 H8 120.6 119.5
C8 C9 C10 122.9 121.0
C8 C9 H9 119.2 119.5
C10 C9 H9 117.9 119.5
C9 C10 C11 122.5 120.2
C10 C11 O12 113.4 109.4
C10 C11 P13 114.0 109.5
C10 C11 H11 104.8 109.5
O12 C11 P13 113.7 109.4
O12 C11 H11 105.2 109.4
C11 O12 H12 113.5 106.8
P13 C11 H11 104.5 109.6
C11 P13 O15 102.8 109.4
C11 P13 O16 115.1 109.5
C11 P13 O17 108.8 109.6
O15 P13 O16 113.5 109.4
O15 P13 O17 104.3 109.5
O16 P13 O17 111.4 109.4
P13 O16 H16 115.2 106.9
P13 O17 H17 108.8 106.8

Torsion Angles for I59

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.0
C2 C1 C6 C5 359.6 360.0
C2 C1 C6 H6 179.6 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 0.4 0.2
C1 C2 C3 C7 178.8 180.0
C2 C1 C6 H1 180.0 180.0
C6 C1 C2 C3 0.3 0.0
C6 C1 C2 H2 180.3 180.0
C4 C5 C6 C1 359.8 359.8
C1 C6 C5 H5 179.8 180.0
C5 C6 C1 H6 180.0 180.0
C2 C1 H1 C6 180.0 180.0
H1 C1 C2 C3 180.4 180.0
H1 C1 C2 H2 0.4 0.0
H1 C1 C6 C5 179.5 180.0
H1 C1 C6 H6 359.5 0.0
C3 C2 C1 C6 0.3 0.0
C3 C2 C1 H1 180.4 180.0
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 C7 181.5 180.2
C2 C3 C4 C5 359.1 359.5
C2 C3 C4 C10 177.3 180.3
C2 C3 C7 C8 182.6 180.0
C2 C3 C7 H7 2.6 0.0
H2 C2 C1 C6 180.3 180.0
H2 C2 C1 H1 0.4 0.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 180.4 180.2
H2 C2 C3 C7 358.8 0.0
C4 C3 C2 H2 180.4 180.2
C2 C3 C4 C7 178.4 179.8
C4 C3 C7 C8 1.1 359.8
C4 C3 C7 H7 181.0 179.8
C5 C4 C3 C10 181.8 179.3
C3 C4 C5 C6 0.8 0.5
C3 C4 C5 H5 180.8 180.3
C3 C4 C10 C9 0.3 359.6
C3 C4 C10 C11 180.7 179.8
C7 C3 C2 H2 358.8 0.0
C2 C3 C7 C4 181.5 180.2
C7 C3 C4 C5 180.6 179.7
C7 C3 C4 C10 358.9 0.5
C8 C7 C3 H7 180.0 180.0
C3 C7 C8 C9 359.8 359.9
C3 C7 C8 H8 179.7 180.0
C1 C6 C5 C4 359.8 359.8
C5 C4 C3 C7 180.6 179.7
C3 C4 C5 C10 178.2 180.7
C5 C4 C10 C9 178.5 180.3
C5 C4 C10 C11 358.9 0.5
C6 C5 C4 H5 180.0 180.2
C4 C5 C6 H6 179.8 179.8
C10 C4 C3 C7 358.9 0.5
C3 C4 C10 C5 181.8 179.3
C10 C4 C5 C6 182.6 179.7
C10 C4 C5 H5 2.6 359.5
C8 C9 C10 C4 0.6 0.2
C4 C10 C9 H9 180.7 180.3
C9 C10 C4 C11 179.6 179.8
C4 C10 C11 O12 97.9 161.6
C4 C10 C11 P13 230.0 281.5
C4 C10 C11 H11 343.7 41.7
C5 C6 C1 H1 179.5 180.0
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 C10 182.6 179.7
C4 C5 C6 H5 180.0 179.8
H5 C5 C4 C10 2.6 359.5
C4 C5 H5 C6 180.0 180.2
H5 C5 C6 H6 359.8 359.9
H6 C6 C1 H1 359.5 0.0
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 H5 359.8 359.9
C3 C7 C8 H7 180.0 180.0
C9 C8 C7 H8 180.0 179.9
C7 C8 C9 C10 359.3 0.1
C7 C8 C9 H9 179.3 180.0
C3 C7 H7 C8 180.0 180.0
H7 C7 C8 C9 179.8 179.9
H7 C7 C8 H8 359.8 360.0
C4 C10 C9 C8 0.6 0.2
C9 C8 C7 H7 179.8 179.9
C7 C8 C9 H8 180.0 180.1
C10 C9 C8 H9 180.1 180.1
C8 C9 C10 C11 180.2 179.9
H8 C8 C7 H7 359.8 360.0
C7 C8 H8 C9 180.0 179.9
H8 C8 C9 C10 179.4 180.0
H8 C8 C9 H9 359.3 359.9
C4 C10 C9 C11 180.4 180.2
C10 C9 C8 H8 179.4 180.0
C8 C9 C10 H9 179.9 179.9
C9 C10 C11 O12 278.3 341.9
C9 C10 C11 P13 50.4 101.8
C9 C10 C11 H11 164.1 221.9
H9 C9 C8 H8 359.3 359.9
C8 C9 H9 C10 180.0 180.1
H9 C9 C10 C11 0.3 0.0
C4 C10 C11 C9 179.6 179.8
C11 C10 C9 H9 0.3 0.0
O12 C11 C10 P13 227.8 240.1
O12 C11 C10 H11 114.2 119.9
C10 C11 O12 H12 180.0 60.0
P13 C11 C10 H11 246.4 239.8
C10 C11 P13 O15 72.9 44.6
C10 C11 P13 O16 308.9 164.6
C10 C11 P13 O17 183.1 284.6
C10 C11 O12 P13 132.4 120.0
C10 C11 O12 H11 246.0 240.0
P13 C11 O12 H11 113.7 120.1
O12 C11 P13 O15 204.9 164.6
O12 C11 P13 O16 80.9 284.5
O12 C11 P13 O17 315.2 44.6
C10 C11 P13 O12 227.9 240.1
C10 C11 P13 H11 113.8 120.1
O12 C11 P13 H11 245.9 240.0
P13 C11 O12 H12 47.6 300.0
O15 P13 C11 O16 124.0 240.0
O15 P13 C11 O17 249.8 120.0
O16 P13 C11 O17 125.8 240.0
C11 P13 O16 H16 180.0 180.1
C11 P13 O17 H17 180.0 300.0
C10 C11 H11 O12 119.8 119.9
C10 C11 H11 P13 239.8 239.9
O12 C11 H11 P13 120.0 120.0
H11 C11 O12 H12 293.9 180.0
H11 C11 P13 O15 319.0 284.5
H11 C11 P13 O16 195.0 44.5
H11 C11 P13 O17 69.3 164.5
H12 O12 C11 P13 47.6 300.0
H12 O12 C11 H11 293.9 180.0
O15 P13 C11 H11 319.0 284.5
C11 P13 O15 O16 234.9 120.0
C11 P13 O15 O17 113.5 239.9
O16 P13 O15 O17 238.6 119.9
O15 P13 O16 H16 61.9 300.0
O15 P13 O17 H17 289.2 180.0
O16 P13 C11 H11 195.0 44.5
C11 P13 O16 O15 118.2 240.1
C11 P13 O16 O17 235.6 120.1
O15 P13 O16 O17 117.4 240.1
O16 P13 O17 H17 52.0 60.1
O17 P13 C11 H11 69.3 164.5
C11 P13 O17 O15 250.8 120.0
C11 P13 O17 O16 127.9 239.9
O15 P13 O17 O16 237.2 119.9
O17 P13 O16 H16 304.5 60.0
H16 O16 P13 O17 304.5 60.0