PDB Chemical Component I41

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for I41

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O04 C03 1.236 1.207
C03 O02 1.469 1.342
C03 C05 1.531 1.508
O02 C01 1.458 1.452
C05 C06 1.539 1.529
C05 N12 1.466 1.465
C06 C07 1.512 1.508
C07 C08 1.402 1.347
C07 N11 1.353 1.369
C08 N09 1.346 1.341
N09 C10 1.365 1.304
C10 N11 1.350 1.350
N12 C13 1.336 1.348
C13 O14 1.218 1.212
C13 C15 1.556 1.507
C15 N16 1.520 1.469
N16 C17 1.496 1.469
N16 C21 1.493 1.469
C17 C18 1.562 1.507
C18 O19 1.261 1.342
C18 O20 1.248 1.208
C21 C22 1.551 1.508
C22 C23 1.420 1.382
C22 C27 1.417 1.382
C23 C24 1.414 1.382
C24 C25 1.401 1.383
C25 C26 1.407 1.382
C26 C27 1.420 1.381
C05 H05 1.100 1.089
C01 H011 1.100 1.090
C01 H012 1.100 1.091
C01 H013 1.101 1.090
C06 H061 1.100 1.090
C06 H062 1.100 1.090
N12 H12 1.000 0.971
C08 H08 1.080 1.080
N11 H11 1.000 0.970
C10 H10 1.080 1.080
C15 H151 1.100 1.090
C15 H152 1.100 1.090
C17 H171 1.100 1.090
C17 H172 1.100 1.090
C21 H211 1.100 1.090
C21 H212 1.100 1.090
O19 H19 0.950 0.967
C23 H23 1.080 1.080
C27 H27 1.080 1.080
C24 H24 1.080 1.079
C25 H25 1.080 1.080
C26 H26 1.080 1.080

Bond Angles for I41

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O04 C03 O02 116.3 120.0
O04 C03 C05 121.6 120.0
O02 C03 C05 122.0 120.0
C03 O02 C01 123.9 117.0
C03 C05 C06 113.3 109.5
C03 C05 N12 109.8 109.4
C03 C05 H05 110.8 109.5
O02 C01 H011 109.5 109.5
O02 C01 H012 109.5 109.5
O02 C01 H013 109.4 109.5
C06 C05 N12 119.1 109.5
C05 C06 C07 125.4 109.5
C06 C05 H05 99.1 109.5
C05 C06 H061 104.5 109.5
C05 C06 H062 100.7 109.5
C05 N12 C13 119.3 120.0
N12 C05 H05 103.5 109.5
C05 N12 H12 120.4 120.0
C06 C07 C08 130.1 126.6
C06 C07 N11 123.1 126.5
C07 C06 H061 104.5 109.4
C07 C06 H062 100.8 109.5
C08 C07 N11 106.8 106.9
C07 C08 N09 108.7 108.0
C07 C08 H08 125.7 126.0
C07 N11 C10 107.9 107.1
C07 N11 H11 126.1 126.4
C08 N09 C10 106.6 109.3
N09 C08 H08 125.6 126.0
N09 C10 N11 110.0 108.7
N09 C10 H10 125.0 125.6
C10 N11 H11 126.0 126.5
N11 C10 H10 125.0 125.6
N12 C13 O14 116.2 119.9
N12 C13 C15 122.1 120.0
C13 N12 H12 120.4 120.0
O14 C13 C15 121.6 120.0
C13 C15 N16 112.9 109.5
C13 C15 H151 108.4 109.5
C13 C15 H152 107.6 109.4
C15 N16 C17 112.0 111.0
C15 N16 C21 114.2 111.0
N16 C15 H151 108.4 109.5
N16 C15 H152 107.6 109.5
C17 N16 C21 111.8 111.0
N16 C17 C18 112.5 109.5
N16 C17 H171 108.5 109.4
N16 C17 H172 107.8 109.5
N16 C21 C22 117.4 109.5
N16 C21 H211 106.9 109.5
N16 C21 H212 105.1 109.5
C17 C18 O19 124.9 120.0
C17 C18 O20 118.6 120.0
C18 C17 H171 108.5 109.5
C18 C17 H172 107.8 109.5
O19 C18 O20 116.5 120.0
C18 O19 H19 109.5 117.0
C21 C22 C23 121.3 120.0
C21 C22 C27 121.9 120.0
C22 C21 H211 106.9 109.4
C22 C21 H212 105.1 109.5
C23 C22 C27 116.7 120.0
C22 C23 C24 122.0 120.0
C22 C23 H23 119.0 120.0
C22 C27 C26 121.3 120.0
C22 C27 H27 119.3 120.0
C23 C24 C25 120.4 119.9
C24 C23 H23 119.0 120.0
C23 C24 H24 119.8 120.0
C24 C25 C26 118.8 120.0
C25 C24 H24 119.8 120.0
C24 C25 H25 120.6 120.0
C25 C26 C27 120.7 120.0
C26 C25 H25 120.6 120.0
C25 C26 H26 119.6 120.0
C26 C27 H27 119.4 120.0
C27 C26 H26 119.6 120.0
H011 C01 H012 109.5 109.5
H011 C01 H013 109.5 109.4
H012 C01 H013 109.5 109.5
H061 C06 H062 123.0 109.4
H151 C15 H152 112.2 109.5
H171 C17 H172 111.9 109.4
H211 C21 H212 115.9 109.5

Torsion Angles for I41

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O02 C03 O04 C05 178.4 180.3
O04 C03 O02 C01 344.0 360.0
O04 C03 C05 C06 234.0 120.0
O04 C03 C05 N12 98.1 0.0
O04 C03 C05 H05 344.4 240.0
O04 C03 O02 C05 181.6 179.7
O02 C03 C05 C06 55.7 299.7
O02 C03 C05 N12 279.8 179.7
O02 C03 C05 H05 166.1 59.7
C03 O02 C01 H011 343.7 300.0
C03 O02 C01 H012 103.7 60.0
C03 O02 C01 H013 223.7 180.0
O04 C03 C05 O02 178.3 180.3
C05 C03 O02 C01 162.4 180.3
C06 C05 C03 N12 135.8 120.0
C03 C05 C06 C07 236.3 175.1
C06 C05 C03 H05 249.6 240.0
C03 C05 C06 H061 356.3 295.0
C03 C05 C06 H062 124.7 55.0
C03 C05 N12 C13 232.6 275.0
N12 C05 C03 H05 113.8 120.0
C03 C05 N12 H12 52.6 95.0
C01 O02 C03 C05 162.4 180.3
H011 C01 O02 H012 240.0 240.0
H011 C01 O02 H013 120.0 120.0
H012 C01 O02 H013 240.0 240.0
C03 C05 C06 N12 228.6 240.1
C03 C05 C06 H05 117.5 120.0
C06 C05 N12 C13 99.6 155.0
N12 C05 C06 H05 248.9 240.0
C06 C05 N12 H12 279.7 335.1
C05 C06 C07 C08 6.7 85.0
C05 C06 C07 N11 185.8 264.7
C07 C06 C05 H061 240.0 240.0
C07 C06 C05 H062 111.6 120.0
H061 C06 C05 H062 231.6 240.0
C03 C05 N12 C06 132.9 120.0
C03 C05 N12 H05 241.6 240.0
N12 C05 C06 C07 7.7 295.0
C06 C05 N12 H05 108.7 120.0
N12 C05 C06 H061 127.7 55.0
N12 C05 C06 H062 256.1 175.0
C05 N12 C13 O14 355.5 360.0
C05 N12 C13 C15 175.4 180.0
C13 N12 C05 H12 180.0 180.0
C07 C06 C05 N12 7.7 295.0
C07 C06 C05 H05 118.8 55.0
C05 C06 C07 H061 120.0 120.0
C05 C06 C07 H062 248.4 239.9
C08 C07 C06 N11 180.9 180.3
C06 C07 C08 N09 179.9 180.0
C06 C07 C08 H08 359.9 360.0
C06 C07 N11 C10 180.6 179.9
C06 C07 N11 H11 0.6 360.0
H061 C06 C07 H062 128.5 119.9
C06 C07 C08 N11 179.2 179.7
C08 C07 C06 H061 246.7 325.0
C08 C07 C06 H062 118.3 205.1
C08 C07 N11 C10 359.8 359.6
C08 C07 N11 H11 179.8 179.7
C07 C08 N09 C10 359.0 0.0
N09 C08 C07 H08 180.0 180.0
C06 C07 N11 C08 180.7 180.3
N11 C07 C06 H061 65.8 144.7
N11 C07 C06 H062 297.4 24.8
N11 C07 C08 N09 0.7 0.2
N11 C07 C08 H08 180.7 180.3
N09 C10 N11 C07 359.6 0.4
C10 N11 C07 H11 180.0 179.9
C07 N11 C10 H10 179.6 180.2
N09 C08 C07 N11 0.7 0.2
C07 C08 N09 H08 180.0 180.0
C08 N09 C10 N11 0.9 359.7
C08 N09 C10 H10 180.9 180.0
C07 N11 C10 N09 359.6 0.4
C10 N09 C08 H08 179.0 180.0
N09 C10 N11 H11 179.6 180.3
N11 C10 N09 H10 180.0 179.7
C07 N11 C10 H11 180.0 180.1
N09 C10 N11 H10 180.0 180.3
C13 N12 C05 H05 350.9 35.0
C05 N12 C13 H12 180.0 180.0
O14 C13 N12 C15 180.0 180.0
N12 C13 C15 N16 234.6 180.0
N12 C13 C15 H151 354.6 300.0
N12 C13 C15 H152 116.1 60.0
N12 C13 O14 C15 180.0 180.0
O14 C13 N12 H12 175.4 180.0
O14 C13 C15 N16 54.6 0.0
O14 C13 C15 H151 174.6 120.0
O14 C13 C15 H152 296.1 240.0
N12 C13 C15 O14 180.0 180.0
C15 C13 N12 H12 355.4 360.0
C13 C15 N16 C17 3.7 66.1
C13 C15 N16 C21 132.0 190.0
N16 C15 C13 H151 240.0 240.0
N16 C15 C13 H152 118.5 120.0
H151 C15 C13 H152 238.5 240.0
C13 C15 N16 H151 120.0 120.0
C13 C15 N16 H152 241.5 240.0
C17 N16 C15 C21 231.7 236.1
C15 N16 C17 C18 282.1 64.8
C15 N16 C17 H171 42.1 184.8
C15 N16 C17 H172 163.4 304.8
C15 N16 C21 C22 161.9 163.8
C15 N16 C21 H211 281.9 283.7
C15 N16 C21 H212 45.5 43.8
H151 C15 N16 H152 121.5 120.0
C15 N16 C17 C21 129.6 123.9
C17 N16 C15 H151 243.6 306.1
C17 N16 C15 H152 122.2 186.0
C17 N16 C21 C22 290.3 287.7
C17 N16 C21 H211 50.3 47.7
C17 N16 C21 H212 174.0 167.7
N16 C17 C18 O19 312.4 177.4
N16 C17 C18 O20 132.4 357.4
C18 C17 N16 H171 240.0 240.0
C18 C17 N16 H172 118.7 120.1
H171 C17 N16 H172 238.7 240.0
C15 N16 C21 C17 231.6 236.1
C21 N16 C15 H151 12.0 70.0
C21 N16 C15 H152 250.5 310.0
C21 N16 C17 C18 152.5 300.9
C21 N16 C17 H171 272.5 60.9
C21 N16 C17 H172 33.8 180.8
N16 C21 C22 C23 100.6 96.0
N16 C21 C22 C27 278.6 275.8
C22 C21 N16 H211 240.0 240.0
C22 C21 N16 H212 116.3 120.0
H211 C21 N16 H212 236.3 240.0
C18 C17 N16 C21 152.5 300.9
N16 C17 C18 H171 120.0 120.0
N16 C17 C18 H172 241.3 239.9
O19 C18 C17 O20 180.0 180.0
C17 C18 O19 H19 180.0 179.9
H171 C17 C18 H172 121.3 120.0
C17 C18 O19 O20 180.0 180.0
O19 C18 C17 H171 192.4 57.4
O19 C18 C17 H172 71.1 297.4
C17 C18 O20 O19 180.0 180.0
O20 C18 C17 H171 12.4 237.4
O20 C18 C17 H172 251.1 117.5
O20 C18 O19 H19 0.0 359.9
N16 C21 C22 H211 120.0 120.0
N16 C21 C22 H212 243.7 240.0
C23 C22 C21 C27 182.1 180.2
C21 C22 C23 C24 179.0 180.0
C21 C22 C23 H23 359.0 0.0
C21 C22 C27 C26 181.0 179.8
C21 C22 C27 H27 1.0 360.0
H211 C21 C22 H212 123.7 120.0
C21 C22 C23 C27 178.0 179.8
C23 C22 C21 H211 340.6 336.0
C23 C22 C21 H212 216.9 216.0
C23 C22 C27 C26 359.0 359.6
C23 C22 C27 H27 179.0 179.7
C22 C23 C24 C25 359.3 0.0
C24 C23 C22 H23 180.0 180.0
C22 C23 C24 H24 179.4 180.0
C21 C22 C27 C23 182.0 180.2
C27 C22 C21 H211 158.5 155.8
C27 C22 C21 H212 34.9 35.8
C27 C22 C23 C24 1.0 0.2
C27 C22 C23 H23 181.0 180.3
C25 C26 C27 C22 0.6 0.4
C26 C27 C22 H27 180.0 179.8
C22 C27 C26 H26 180.6 180.3
C24 C23 C22 C27 1.0 0.2
C22 C23 C24 H23 180.0 180.0
C23 C24 C25 C26 0.2 360.0
C25 C24 C23 H24 180.0 180.0
C23 C24 C25 H25 180.3 180.0
C25 C24 C23 H23 179.4 180.0
C23 C24 C25 H24 180.0 180.0
C24 C25 C26 C27 359.8 359.8
C26 C25 C24 H25 180.0 180.0
C24 C25 C26 H26 179.8 180.0
C22 C27 C26 C25 0.6 0.4
C26 C25 C24 H24 180.2 180.0
C24 C25 C26 H25 180.0 180.0
C25 C26 C27 H27 180.6 180.2
C27 C26 C25 H26 180.0 179.9
C22 C27 C26 H27 180.0 180.2
C27 C26 C25 H25 179.8 179.8
C25 C26 C27 H26 180.0 180.1
C03 C05 H05 C06 240.7 240.0
C03 C05 H05 N12 117.7 119.9
C06 C05 H05 N12 237.0 239.9
H05 C05 C06 C07 118.8 55.0
H05 C05 C06 H061 238.8 175.0
H05 C05 C06 H062 7.3 295.0
H05 C05 N12 C13 350.9 35.0
H05 C05 N12 H12 171.0 215.0
O02 C01 H011 H012 120.0 120.0
O02 C01 H011 H013 240.0 240.0
H012 C01 H011 H013 120.0 119.9
O02 C01 H012 H011 240.0 240.0
O02 C01 H012 H013 120.0 120.1
H011 C01 H012 H013 240.0 240.1
O02 C01 H013 H011 120.0 120.0
O02 C01 H013 H012 240.0 239.9
H011 C01 H013 H012 120.0 120.0
H061 C06 C05 N12 127.7 55.0
C05 C06 H061 C07 226.8 240.0
H061 C06 C05 H05 238.8 175.0
C05 C06 H061 H062 113.4 120.1
H061 C06 C07 C08 246.7 325.0
H061 C06 C07 N11 65.8 144.7
C07 C06 H061 H062 246.6 240.1
H062 C06 C05 N12 256.1 175.0
C05 C06 H062 C07 129.5 120.0
H062 C06 C05 H05 7.3 295.0
C05 C06 H062 H061 244.7 239.9
H062 C06 C07 C08 118.3 205.1
H062 C06 C07 N11 297.4 24.8
C07 C06 H062 H061 115.3 119.9
C05 N12 H12 C13 180.0 180.0
H12 N12 C05 H05 171.0 215.0
H12 N12 C13 O14 175.4 180.0
H12 N12 C13 C15 355.4 360.0
H08 C08 C07 N11 180.7 180.3
C07 C08 H08 N09 180.0 180.0
H08 C08 N09 C10 179.0 180.0
C07 N11 H11 C10 180.0 179.9
H11 N11 C10 H10 359.6 0.0
N09 C10 H10 N11 180.0 179.7
H10 C10 N11 H11 359.6 0.0
C13 C15 H151 N16 237.2 240.0
C13 C15 H151 H152 118.6 120.0
H151 C15 N16 C17 243.6 306.1
H151 C15 N16 C21 12.0 70.0
N16 C15 H151 H152 241.4 240.0
C13 C15 H152 N16 121.9 120.0
C13 C15 H152 H151 240.9 240.0
H152 C15 N16 C17 122.2 186.0
H152 C15 N16 C21 250.5 310.0
N16 C15 H152 H151 119.1 120.1
H171 C17 N16 C21 272.5 60.9
N16 C17 H171 C18 237.5 240.0
N16 C17 H171 H172 118.7 120.0
H171 C17 C18 O19 192.4 57.4
H171 C17 C18 O20 12.4 237.4
C18 C17 H171 H172 241.2 240.0
H172 C17 N16 C21 33.8 180.8
N16 C17 H172 C18 121.7 120.1
N16 C17 H172 H171 240.8 240.0
H172 C17 C18 O19 71.1 297.4
H172 C17 C18 O20 251.1 117.5
C18 C17 H172 H171 119.1 120.0
N16 C21 H211 C22 233.5 240.0
N16 C21 H211 H212 116.7 120.0
H211 C21 C22 C23 340.6 336.0
H211 C21 C22 C27 158.5 155.8
C22 C21 H211 H212 243.3 240.0
N16 C21 H212 C22 124.5 120.0
N16 C21 H212 H211 242.2 240.0
H212 C21 C22 C23 216.9 216.0
H212 C21 C22 C27 34.9 35.8
C22 C21 H212 H211 117.7 120.0
H19 O19 C18 O20 0.0 359.9
H23 C23 C22 C27 181.0 180.3
C22 C23 H23 C24 180.0 180.0
H23 C23 C24 C25 179.4 180.0
H23 C23 C24 H24 359.4 359.9
C22 C27 H27 C26 180.0 179.8
H27 C27 C26 H26 0.6 0.1
C23 C24 H24 C25 180.0 180.0
H24 C24 C23 H23 359.4 359.9
H24 C24 C25 C26 180.2 180.0
H24 C24 C25 H25 0.2 0.0
C24 C25 H25 C26 180.0 180.0
H25 C25 C24 H24 0.2 0.0
H25 C25 C26 C27 179.8 179.8
H25 C25 C26 H26 359.8 360.0
C25 C26 H26 C27 180.0 179.9
H26 C26 C25 H25 359.8 360.0
H26 C26 C27 H27 0.6 0.1