PDB Chemical Component I3P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for I3P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.473 1.529
C1 C6 1.465 1.529
C1 O1 1.480 1.429
C1 H1 1.115 1.089
C2 C3 1.540 1.529
C2 O2 1.427 1.428
C2 H2 1.114 1.090
C3 C4 1.510 1.529
C3 O3 1.413 1.430
C3 H3 1.116 1.090
C4 C5 1.521 1.529
C4 O4 1.462 1.430
C4 H4 1.114 1.088
C5 C6 1.528 1.529
C5 O5 1.453 1.429
C5 H5 1.115 1.089
C6 O6 1.438 1.429
C6 H6 1.114 1.090
O1 P1 1.449 1.610
O2 HO2 0.950 0.968
O3 HO3 0.951 0.967
O4 P4 1.463 1.608
O5 P5 1.372 1.610
O6 HO6 0.950 0.967
P1 O11 1.394 1.480
P1 O12 1.441 1.609
P1 O13 1.392 1.609
O12 HO12 0.950 0.966
O13 HO13 0.950 0.966
P4 O41 1.385 1.480
P4 O42 1.403 1.610
P4 O43 1.374 1.610
O42 HO42 0.950 0.967
O43 HO43 0.950 0.966
P5 O51 1.341 1.480
P5 O52 1.407 1.609
P5 O53 1.346 1.611
O52 HO52 0.951 0.966
O53 HO53 0.951 0.967

Bond Angles for I3P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 113.8 109.4
C2 C1 O1 112.7 109.4
C2 C1 H1 104.5 109.5
C1 C2 C3 111.8 109.4
C1 C2 O2 111.2 109.5
C1 C2 H2 106.9 109.5
C6 C1 O1 111.1 109.5
C6 C1 H1 106.4 109.5
C1 C6 C5 111.3 109.5
C1 C6 O6 111.2 109.5
C1 C6 H6 107.4 109.6
O1 C1 H1 107.7 109.5
C1 O1 P1 131.8 106.8
C3 C2 O2 110.2 109.5
C3 C2 H2 107.9 109.4
C2 C3 C4 110.2 109.5
C2 C3 O3 109.6 109.5
C2 C3 H3 108.6 109.6
O2 C2 H2 108.6 109.5
C2 O2 HO2 111.1 106.8
C4 C3 O3 108.7 109.4
C4 C3 H3 109.5 109.5
C3 C4 C5 108.8 109.4
C3 C4 O4 106.7 109.5
C3 C4 H4 112.9 109.5
O3 C3 H3 110.2 109.4
C3 O3 HO3 109.6 106.8
C5 C4 O4 112.7 109.4
C5 C4 H4 106.9 109.5
C4 C5 C6 109.6 109.4
C4 C5 O5 108.6 109.4
C4 C5 H5 109.6 109.5
O4 C4 H4 109.0 109.4
C4 O4 P4 131.5 106.8
C6 C5 O5 108.2 109.5
C6 C5 H5 110.0 109.5
C5 C6 O6 110.4 109.5
C5 C6 H6 108.2 109.5
O5 C5 H5 110.9 109.4
C5 O5 P5 130.0 106.9
O6 C6 H6 108.3 109.4
C6 O6 HO6 111.1 106.8
O1 P1 O11 106.6 109.4
O1 P1 O12 104.5 109.5
O1 P1 O13 110.6 109.5
O4 P4 O41 113.7 109.5
O4 P4 O42 98.1 109.5
O4 P4 O43 110.4 109.5
O5 P5 O51 106.4 109.5
O5 P5 O52 115.0 109.6
O5 P5 O53 105.3 109.4
O11 P1 O12 111.0 109.5
O11 P1 O13 122.5 109.4
O12 P1 O13 100.4 109.5
P1 O12 HO12 104.5 106.9
P1 O13 HO13 110.6 106.8
O41 P4 O42 105.0 109.4
O41 P4 O43 124.4 109.5
O42 P4 O43 100.4 109.4
P4 O42 HO42 98.1 106.8
P4 O43 HO43 110.4 106.8
O51 P5 O52 106.2 109.5
O51 P5 O53 120.6 109.5
O52 P5 O53 103.9 109.4
P5 O52 HO52 115.0 106.9
P5 O53 HO53 105.3 106.8

Torsion Angles for I3P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 O1 127.6 119.9
C6 C1 C2 H1 244.3 240.0
C2 C1 C6 C5 53.6 60.1
C2 C1 C6 O6 177.1 180.1
C2 C1 C6 H6 295.4 300.0
O1 C1 C2 H1 116.7 120.1
C2 C1 O1 P1 276.7 239.9
C3 C2 C1 O2 236.3 240.0
C3 C2 C1 H2 117.9 119.9
C1 C2 C3 C4 54.2 60.1
C1 C2 C3 O3 173.7 180.0
C1 C2 C3 H3 294.2 300.0
O2 C2 C1 H2 241.6 239.9
C1 C2 O2 HO2 180.0 180.0
C2 C1 C6 O1 231.5 240.1
C2 C1 C6 H1 114.6 120.0
C6 C1 C2 C3 308.2 300.0
C6 C1 C2 O2 71.9 60.0
C6 C1 C2 H2 190.3 180.0
O1 C1 C6 H1 243.1 240.0
C6 C1 O1 P1 147.6 120.0
C4 C5 C6 C1 302.4 299.9
C1 C6 C5 O5 184.2 180.0
C1 C6 C5 H5 62.9 60.0
C5 C6 C1 O6 236.5 240.0
C5 C6 C1 H6 118.2 120.1
O6 C6 C1 H6 241.7 240.0
C1 C6 O6 HO6 180.0 60.0
C2 C1 O1 C6 129.0 119.9
C2 C1 O1 H1 245.2 239.9
O1 C1 C2 C3 180.6 180.0
O1 C1 C2 O2 304.3 300.0
O1 C1 C2 H2 62.7 60.1
C6 C1 O1 H1 116.2 120.0
O1 C1 C6 C5 182.1 180.0
O1 C1 C6 O6 305.6 300.0
O1 C1 C6 H6 63.9 60.0
C1 O1 P1 O11 89.1 60.0
C1 O1 P1 O12 331.6 180.0
C1 O1 P1 O13 224.3 300.1
C2 C1 H1 C6 239.3 240.0
C2 C1 H1 O1 120.1 120.0
H1 C1 C2 C3 63.9 60.0
H1 C1 C2 O2 187.6 180.0
H1 C1 C2 H2 306.0 300.0
C6 C1 H1 O1 240.8 240.0
H1 C1 C6 C5 299.1 300.0
H1 C1 C6 O6 62.5 60.0
H1 C1 C6 H6 180.9 180.0
H1 C1 O1 P1 31.5 0.0
C3 C2 C1 C6 308.2 300.0
C3 C2 C1 O1 180.6 180.0
C3 C2 C1 H1 63.9 60.0
C1 C2 C3 O2 124.2 120.0
C1 C2 C3 H2 242.7 240.0
O2 C2 C3 H2 118.5 120.0
C3 C2 O2 HO2 304.7 300.0
C4 C3 C2 O3 240.4 240.0
C4 C3 C2 H3 120.0 120.0
C2 C3 C4 C5 301.3 299.9
C2 C3 C4 O4 179.6 180.0
C2 C3 C4 H4 59.9 60.0
O3 C3 C2 H3 239.6 240.0
C2 C3 O3 HO3 180.0 60.0
O2 C2 C1 C6 71.9 60.0
O2 C2 C1 O1 304.3 300.0
O2 C2 C1 H1 187.6 180.0
C1 C2 O2 C3 235.4 240.0
C1 C2 O2 H2 117.4 120.0
C3 C2 O2 H2 242.0 240.0
O2 C2 C3 C4 290.0 300.0
O2 C2 C3 O3 49.5 60.0
O2 C2 C3 H3 170.0 180.0
H2 C2 C1 C6 190.3 180.0
H2 C2 C1 O1 62.7 60.1
H2 C2 C1 H1 306.0 300.0
C1 C2 H2 C3 120.4 119.9
C1 C2 H2 O2 239.9 239.9
C3 C2 H2 O2 119.5 120.0
H2 C2 C3 C4 171.5 180.0
H2 C2 C3 O3 291.1 300.0
H2 C2 C3 H3 51.5 60.0
H2 C2 O2 HO2 62.6 59.9
C4 C3 C2 O2 290.0 300.0
C4 C3 C2 H2 171.5 180.0
C2 C3 C4 O3 120.1 120.0
C2 C3 C4 H3 240.5 239.9
O3 C3 C4 H3 120.4 119.9
C4 C3 O3 HO3 300.6 180.0
C5 C4 C3 O4 121.8 119.9
C5 C4 C3 H4 241.5 239.9
C3 C4 C5 C6 60.4 60.0
C3 C4 C5 O5 178.5 180.0
C3 C4 C5 H5 299.7 300.0
O4 C4 C3 H4 119.7 120.0
C3 C4 O4 P4 244.8 240.0
O3 C3 C2 O2 49.5 60.0
O3 C3 C2 H2 291.1 300.0
C2 C3 O3 C4 239.5 240.0
C2 C3 O3 H3 119.5 120.1
C4 C3 O3 H3 240.0 240.1
O3 C3 C4 C5 181.2 179.9
O3 C3 C4 O4 59.4 60.0
O3 C3 C4 H4 299.7 300.0
H3 C3 C2 O2 170.0 180.0
H3 C3 C2 H2 51.5 60.0
C2 C3 H3 C4 120.5 120.1
C2 C3 H3 O3 239.9 240.0
C4 C3 H3 O3 119.5 119.9
H3 C3 C4 C5 60.8 60.0
H3 C3 C4 O4 299.0 300.1
H3 C3 C4 H4 179.3 180.1
H3 C3 O3 HO3 60.5 299.9
C1 C6 C5 C4 302.4 299.9
C5 C4 C3 O3 181.2 179.9
C5 C4 C3 H3 60.8 60.0
C3 C4 C5 O4 241.9 240.0
C3 C4 C5 H4 122.2 120.1
O4 C4 C5 H4 240.3 240.0
C5 C4 O4 P4 125.5 120.0
C6 C5 C4 O5 242.0 240.0
C6 C5 C4 H5 120.7 120.0
C4 C5 C6 O6 178.5 179.9
C4 C5 C6 H6 60.1 60.0
O5 C5 C4 H5 238.8 240.0
C4 C5 O5 P5 119.7 120.1
O4 C4 C3 O3 59.4 60.0
O4 C4 C3 H3 299.0 300.1
C3 C4 O4 C5 119.3 119.9
C3 C4 O4 H4 237.8 239.9
C5 C4 O4 H4 118.5 120.0
O4 C4 C5 C6 178.5 180.0
O4 C4 C5 O5 296.5 300.0
O4 C4 C5 H5 57.7 60.0
C4 O4 P4 O41 318.4 60.0
C4 O4 P4 O42 68.8 180.0
C4 O4 P4 O43 173.1 300.0
H4 C4 C3 O3 299.7 300.0
H4 C4 C3 H3 179.3 180.1
C3 C4 H4 C5 240.4 240.0
C3 C4 H4 O4 118.4 120.0
C5 C4 H4 O4 237.9 240.0
H4 C4 C5 C6 298.2 300.0
H4 C4 C5 O5 56.3 59.9
H4 C4 C5 H5 177.5 179.9
H4 C4 O4 P4 6.9 0.0
C5 C6 C1 O1 182.1 180.0
C5 C6 C1 H1 299.1 300.0
C1 C6 C5 O6 123.9 120.0
C1 C6 C5 H6 242.3 239.9
C6 C5 C4 O4 178.5 180.0
C6 C5 C4 H4 298.2 300.0
C4 C5 C6 O5 118.3 119.9
C4 C5 C6 H5 239.5 239.9
O5 C5 C6 H5 121.3 120.0
C6 C5 O5 P5 238.6 240.0
O6 C6 C5 H6 118.4 119.9
C5 C6 O6 HO6 304.1 180.0
O5 C5 C4 O4 296.5 300.0
O5 C5 C4 H4 56.3 59.9
C4 C5 O5 C6 241.1 240.1
C4 C5 O5 H5 120.4 120.0
C6 C5 O5 H5 239.3 240.0
O5 C5 C6 O6 60.2 60.0
O5 C5 C6 H6 301.9 300.1
C5 O5 P5 O51 230.3 59.9
C5 O5 P5 O52 347.5 180.0
C5 O5 P5 O53 101.2 300.0
H5 C5 C4 O4 57.7 60.0
H5 C5 C4 H4 177.5 179.9
C4 C5 H5 C6 120.5 120.0
C4 C5 H5 O5 240.2 240.0
C6 C5 H5 O5 119.7 120.0
H5 C5 C6 O6 299.0 300.0
H5 C5 C6 H6 180.6 180.1
H5 C5 O5 P5 359.3 0.0
O6 C6 C1 O1 305.6 300.0
O6 C6 C1 H1 62.5 60.0
C1 C6 O6 C5 236.0 240.0
C1 C6 O6 H6 117.7 120.1
O6 C6 C5 O5 60.2 60.0
O6 C6 C5 H5 299.0 300.0
C5 C6 O6 H6 241.8 240.1
H6 C6 C1 O1 63.9 60.0
H6 C6 C1 H1 180.9 180.0
C1 C6 H6 C5 120.2 120.1
C1 C6 H6 O6 239.9 240.0
H6 C6 C5 O5 301.9 300.1
H6 C6 C5 H5 180.6 180.1
C5 C6 H6 O6 119.6 119.9
H6 C6 O6 HO6 62.3 299.9
P1 O1 C1 H1 31.5 0.0
O11 P1 O1 O12 117.5 240.0
O11 P1 O1 O13 224.8 119.9
O12 P1 O1 O13 107.2 239.9
O1 P1 O12 HO12 180.0 180.1
O1 P1 O13 HO13 180.0 299.9
HO2 O2 C2 H2 62.6 59.9
HO3 O3 C3 H3 60.5 299.9
P4 O4 C4 H4 6.9 0.0
O41 P4 O4 O42 249.6 240.0
O41 P4 O4 O43 145.2 120.0
O42 P4 O4 O43 255.6 240.0
O4 P4 O42 HO42 180.0 180.0
O4 P4 O43 HO43 180.0 300.0
P5 O5 C5 H5 359.3 0.0
O51 P5 O5 O52 242.8 239.9
O51 P5 O5 O53 129.1 119.9
O52 P5 O5 O53 246.3 240.0
O5 P5 O52 HO52 180.0 180.0
O5 P5 O53 HO53 180.1 299.9
HO6 O6 C6 H6 62.3 299.9
O1 P1 O11 O12 246.8 120.1
O1 P1 O11 O13 128.6 240.1
O12 P1 O11 O13 241.7 120.0
O11 P1 O12 HO12 65.6 300.1
O11 P1 O13 HO13 306.8 179.9
O1 P1 O12 O11 114.5 240.0
O1 P1 O12 O13 245.4 120.0
O11 P1 O12 O13 130.9 240.0
O12 P1 O13 HO13 70.1 60.0
O1 P1 O13 O11 233.2 119.9
O1 P1 O13 O12 109.9 239.9
O11 P1 O13 O12 236.7 120.0
O13 P1 O12 HO12 294.7 60.0
HO12 O12 P1 O13 294.7 60.0
O4 P4 O41 O42 106.1 120.1
O4 P4 O41 O43 220.4 240.0
O42 P4 O41 O43 114.3 119.9
O41 P4 O42 HO42 297.3 300.0
O41 P4 O43 HO43 39.2 180.0
O4 P4 O42 O41 242.7 240.0
O4 P4 O42 O43 112.6 120.0
O41 P4 O42 O43 229.9 240.1
O42 P4 O43 HO43 282.8 60.0
O4 P4 O43 O41 140.8 120.0
O4 P4 O43 O42 257.2 239.9
O41 P4 O43 O42 116.5 119.9
O43 P4 O42 HO42 67.4 60.0
HO42 O42 P4 O43 67.4 60.0
O5 P5 O51 O52 122.9 120.1
O5 P5 O51 O53 240.4 240.1
O52 P5 O51 O53 117.5 120.0
O51 P5 O52 HO52 297.3 300.0
O51 P5 O53 HO53 59.9 180.0
O5 P5 O52 O51 242.6 239.9
O5 P5 O52 O53 114.5 119.9
O51 P5 O52 O53 231.9 240.0
O52 P5 O53 HO53 301.3 60.0
O5 P5 O53 O51 120.2 120.0
O5 P5 O53 O52 238.8 240.0
O51 P5 O53 O52 118.6 120.0
O53 P5 O52 HO52 65.5 60.0
HO52 O52 P5 O53 65.5 60.0