PDB Chemical Component HZZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HZZ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C10 |
C08 |
1.525 |
1.508 |
| C08 |
C07 |
1.317 |
1.310 |
| C08 |
C09 |
1.528 |
1.507 |
| C12 |
C11 |
1.527 |
1.507 |
| C12 |
C13 |
1.318 |
1.310 |
| C11 |
C09 |
1.527 |
1.530 |
| C07 |
C06 |
1.526 |
1.507 |
| C14 |
C13 |
1.527 |
1.507 |
| C13 |
C15 |
1.528 |
1.507 |
| C06 |
O05 |
1.399 |
1.429 |
| O05 |
P02 |
1.647 |
1.610 |
| O04 |
P02 |
1.509 |
1.481 |
| P02 |
O03 |
1.511 |
1.610 |
| P02 |
O01 |
1.511 |
1.610 |
| C06 |
H1 |
1.100 |
1.091 |
| C06 |
H2 |
1.100 |
1.090 |
| C07 |
H3 |
1.080 |
1.080 |
| C09 |
H4 |
1.100 |
1.090 |
| C09 |
H5 |
1.100 |
1.090 |
| C10 |
H6 |
1.100 |
1.091 |
| C10 |
H7 |
1.100 |
1.090 |
| C10 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.100 |
1.090 |
| C11 |
H10 |
1.100 |
1.090 |
| C12 |
H11 |
1.080 |
1.080 |
| C14 |
H12 |
1.100 |
1.090 |
| C14 |
H13 |
1.100 |
1.091 |
| C14 |
H14 |
1.100 |
1.090 |
| C15 |
H15 |
1.100 |
1.090 |
| C15 |
H16 |
1.100 |
1.090 |
| C15 |
H17 |
1.100 |
1.090 |
| O01 |
H18 |
0.950 |
0.967 |
| O03 |
H19 |
0.950 |
0.966 |
Bond Angles for HZZ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C08 |
C07 |
H3 |
119.7 |
120.1 |
| C08 |
C09 |
H4 |
108.7 |
109.5 |
| C08 |
C09 |
H5 |
108.7 |
109.4 |
| C12 |
C11 |
H9 |
108.7 |
109.4 |
| C12 |
C11 |
H10 |
108.7 |
109.4 |
| C12 |
C13 |
C15 |
120.4 |
120.0 |
| C13 |
C12 |
H11 |
119.6 |
120.0 |
| C11 |
C09 |
H4 |
108.8 |
109.5 |
| C11 |
C09 |
H5 |
108.8 |
109.5 |
| C07 |
C06 |
O05 |
108.5 |
109.5 |
| C07 |
C06 |
H1 |
109.7 |
109.5 |
| C07 |
C06 |
H2 |
109.7 |
109.5 |
| C14 |
C13 |
C15 |
119.8 |
120.0 |
| C13 |
C15 |
H15 |
109.5 |
109.4 |
| C13 |
C15 |
H16 |
109.5 |
109.4 |
| C13 |
C15 |
H17 |
109.5 |
109.5 |
| C06 |
O05 |
P02 |
118.1 |
123.0 |
| O05 |
C06 |
H1 |
109.7 |
109.5 |
| O05 |
C06 |
H2 |
109.7 |
109.4 |
| O04 |
P02 |
O05 |
109.1 |
109.5 |
| P02 |
O03 |
H19 |
109.5 |
114.0 |
| P02 |
O01 |
H18 |
109.5 |
114.0 |
| H1 |
C06 |
H2 |
109.5 |
109.4 |
| H4 |
C09 |
H5 |
109.5 |
109.5 |
| H6 |
C10 |
H7 |
109.5 |
109.5 |
| H6 |
C10 |
H8 |
109.5 |
109.4 |
| H7 |
C10 |
H8 |
109.4 |
109.6 |
| H9 |
C11 |
H10 |
109.5 |
109.5 |
| H12 |
C14 |
H13 |
109.5 |
109.5 |
| H12 |
C14 |
H14 |
109.4 |
109.5 |
| H13 |
C14 |
H14 |
109.5 |
109.4 |
| H15 |
C15 |
H16 |
109.5 |
109.5 |
| H15 |
C15 |
H17 |
109.5 |
109.5 |
| H16 |
C15 |
H17 |
109.5 |
109.5 |
Torsion Angles for HZZ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C08 |
C07 |
H3 |
359.9 |
355.5 |
| C10 |
C08 |
C09 |
H4 |
142.5 |
31.1 |
| C10 |
C08 |
C09 |
H5 |
261.7 |
151.1 |
| C08 |
C07 |
C06 |
O05 |
125.4 |
224.4 |
| C08 |
C07 |
C06 |
H1 |
245.3 |
344.5 |
| C08 |
C07 |
C06 |
H2 |
5.6 |
104.5 |
| C09 |
C08 |
C07 |
H3 |
180.0 |
175.5 |
| C11 |
C09 |
C08 |
H4 |
239.6 |
240.0 |
| C11 |
C09 |
C08 |
H5 |
120.4 |
120.0 |
| H4 |
C09 |
C08 |
H5 |
240.8 |
240.0 |
| C12 |
C11 |
C09 |
H4 |
104.2 |
60.0 |
| C12 |
C11 |
C09 |
H5 |
345.0 |
300.0 |
| H9 |
C11 |
C12 |
H10 |
240.9 |
120.0 |
| C13 |
C12 |
C11 |
H9 |
7.9 |
123.9 |
| C13 |
C12 |
C11 |
H10 |
127.0 |
3.9 |
| C14 |
C13 |
C12 |
C15 |
180.0 |
180.0 |
| C12 |
C13 |
C15 |
H15 |
180.0 |
5.7 |
| C12 |
C13 |
C15 |
H16 |
300.0 |
125.7 |
| C12 |
C13 |
C15 |
H17 |
60.0 |
245.7 |
| C08 |
C09 |
C11 |
H4 |
120.4 |
120.0 |
| C08 |
C09 |
C11 |
H5 |
239.6 |
240.1 |
| H4 |
C09 |
C11 |
H5 |
119.2 |
120.1 |
| C07 |
C06 |
O05 |
P02 |
129.3 |
180.0 |
| O05 |
C06 |
C07 |
H1 |
240.1 |
240.0 |
| O05 |
C06 |
C07 |
H2 |
119.9 |
120.0 |
| H1 |
C06 |
C07 |
H2 |
239.7 |
240.0 |
| C12 |
C13 |
C14 |
C15 |
180.0 |
180.0 |
| C14 |
C13 |
C12 |
H11 |
360.0 |
8.3 |
| C14 |
C13 |
C15 |
H15 |
360.0 |
185.7 |
| C14 |
C13 |
C15 |
H16 |
120.0 |
305.7 |
| C14 |
C13 |
C15 |
H17 |
240.0 |
65.7 |
| C15 |
C13 |
C12 |
H11 |
179.9 |
188.2 |
| H15 |
C15 |
C13 |
H16 |
240.0 |
240.0 |
| H15 |
C15 |
C13 |
H17 |
120.0 |
120.0 |
| H16 |
C15 |
C13 |
H17 |
240.0 |
240.0 |
| C07 |
C06 |
O05 |
H1 |
119.8 |
120.0 |
| C07 |
C06 |
O05 |
H2 |
240.2 |
240.0 |
| O04 |
P02 |
O05 |
C06 |
286.9 |
55.1 |
| H1 |
C06 |
O05 |
H2 |
120.3 |
120.0 |
| P02 |
O05 |
C06 |
H1 |
9.5 |
59.9 |
| P02 |
O05 |
C06 |
H2 |
249.2 |
300.0 |
| O05 |
P02 |
O03 |
H19 |
240.4 |
180.0 |
| O05 |
P02 |
O01 |
H18 |
119.6 |
299.9 |
| C06 |
O05 |
P02 |
O04 |
286.9 |
55.1 |
| O04 |
P02 |
O03 |
H19 |
360.0 |
300.0 |
| O04 |
P02 |
O01 |
H18 |
360.0 |
179.9 |
| C06 |
O05 |
P02 |
O03 |
46.7 |
175.0 |
| O03 |
P02 |
O01 |
H18 |
239.9 |
59.9 |
| C06 |
O05 |
P02 |
O01 |
166.9 |
295.0 |
| C07 |
C06 |
H1 |
O05 |
240.9 |
240.0 |
| C07 |
C06 |
H1 |
H2 |
120.4 |
120.0 |
| H1 |
C06 |
O05 |
P02 |
9.5 |
59.9 |
| O05 |
C06 |
H1 |
H2 |
239.5 |
240.1 |
| C07 |
C06 |
H2 |
O05 |
119.1 |
120.0 |
| C07 |
C06 |
H2 |
H1 |
239.6 |
240.0 |
| H2 |
C06 |
O05 |
P02 |
249.2 |
300.0 |
| O05 |
C06 |
H2 |
H1 |
120.5 |
120.0 |
| H3 |
C07 |
C06 |
O05 |
305.4 |
44.4 |
| H3 |
C07 |
C06 |
H1 |
65.3 |
164.5 |
| H3 |
C07 |
C06 |
H2 |
185.6 |
284.4 |
| C08 |
C09 |
H4 |
H5 |
118.7 |
120.0 |
| C11 |
C09 |
H4 |
H5 |
241.3 |
240.0 |
| C08 |
C09 |
H5 |
H4 |
241.3 |
240.0 |
| C11 |
C09 |
H5 |
H4 |
118.7 |
120.1 |
| H7 |
C10 |
H6 |
H8 |
119.9 |
120.1 |
| H6 |
C10 |
H7 |
H8 |
240.0 |
240.0 |
| H6 |
C10 |
H8 |
H7 |
120.0 |
120.0 |
| C12 |
C11 |
H9 |
H10 |
118.7 |
240.0 |
| H9 |
C11 |
C09 |
H4 |
343.7 |
180.0 |
| H9 |
C11 |
C09 |
H5 |
224.5 |
59.9 |
| C12 |
C11 |
H10 |
H9 |
241.3 |
120.0 |
| H10 |
C11 |
C09 |
H4 |
224.6 |
300.1 |
| H10 |
C11 |
C09 |
H5 |
105.4 |
180.0 |
| H11 |
C12 |
C11 |
H9 |
187.9 |
303.9 |
| H11 |
C12 |
C11 |
H10 |
307.0 |
183.9 |
| H11 |
C12 |
C13 |
C15 |
179.9 |
188.2 |
| H12 |
C14 |
C13 |
C15 |
0.0 |
270.0 |
| H13 |
C14 |
H12 |
H14 |
120.0 |
119.9 |
| H13 |
C14 |
C13 |
C15 |
120.1 |
30.0 |
| H12 |
C14 |
H13 |
H14 |
240.0 |
240.0 |
| H14 |
C14 |
C13 |
C15 |
240.0 |
150.0 |
| H12 |
C14 |
H14 |
H13 |
120.0 |
120.0 |
| C13 |
C15 |
H15 |
H16 |
120.0 |
119.9 |
| C13 |
C15 |
H15 |
H17 |
240.0 |
240.0 |
| H16 |
C15 |
H15 |
H17 |
120.0 |
120.1 |
| C13 |
C15 |
H16 |
H15 |
240.0 |
240.1 |
| C13 |
C15 |
H16 |
H17 |
120.0 |
120.0 |
| H15 |
C15 |
H16 |
H17 |
240.0 |
239.9 |
| C13 |
C15 |
H17 |
H15 |
120.0 |
120.0 |
| C13 |
C15 |
H17 |
H16 |
240.0 |
240.1 |
| H15 |
C15 |
H17 |
H16 |
120.0 |
120.1 |