PDB Chemical Component HY7

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HY7

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5	C6	1.572	1.530
C5	N2	1.467	1.470
C6	N3	1.494	1.470
N3	C7	1.501	1.469
N3	C8	1.495	1.470
C8	C9	1.544	1.530
C9	N2	1.507	1.469
N2	C4	1.473	1.468
C4	C3	1.496	1.507
C3	N4	1.294	1.304
C3	N1	1.354	1.357
N4	C10	1.370	1.342
C10	C11	1.392	1.471
C10	C1	1.379	1.391
C11	C12	1.388	1.394
C11	C16	1.394	1.405
C12	C13	1.376	1.378
C13	BR1	1.907	1.891
C13	C14	1.427	1.388
C14	C15	1.394	1.378
C15	C16	1.376	1.391
C16	O2	1.350	1.350
O2	C1	1.317	1.349
C1	C2	1.408	1.414
C2	O1	1.241	1.220
C2	N1	1.358	1.350
C5	H51C	1.100	1.090
C5	H52C	1.100	1.090
C6	H61C	1.100	1.090
C6	H62C	1.100	1.090
C7	H71C	1.100	1.089
C7	H72C	1.100	1.091
C7	H73C	1.100	1.090
C8	H81C	1.100	1.090
C8	H82C	1.100	1.090
C9	H91C	1.100	1.091
C9	H92C	1.100	1.090
C4	H41C	1.100	1.090
C4	H42C	1.100	1.091
N1	H1	1.000	0.969
C12	H12	1.080	1.079
C14	H14	1.080	1.080
C15	H15	1.080	1.080

Bond Angles for HY7

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C6	C5	N2	110.2	109.4
C5	C6	N3	107.2	109.3
C6	C5	H51C	109.3	109.5
C6	C5	H52C	109.3	109.5
C5	C6	H61C	110.0	109.5
C5	C6	H62C	110.0	109.5
C5	N2	C9	116.6	110.8
C5	N2	C4	111.4	111.0
N2	C5	H51C	109.3	109.4
N2	C5	H52C	109.3	109.5
C6	N3	C7	112.2	111.0
C6	N3	C8	115.7	110.9
N3	C6	H61C	110.0	109.5
N3	C6	H62C	110.1	109.5
C7	N3	C8	102.3	111.0
N3	C7	H71C	109.5	109.5
N3	C7	H72C	109.5	109.4
N3	C7	H73C	109.5	109.5
N3	C8	C9	107.1	109.3
N3	C8	H81C	110.0	109.5
N3	C8	H82C	110.1	109.5
C8	C9	N2	105.1	109.4
C9	C8	H81C	110.1	109.5
C9	C8	H82C	110.1	109.5
C8	C9	H91C	110.6	109.5
C8	C9	H92C	110.6	109.5
C9	N2	C4	111.9	111.1
N2	C9	H91C	110.5	109.5
N2	C9	H92C	110.6	109.4
N2	C4	C3	119.8	109.5
N2	C4	H41C	106.8	109.5
N2	C4	H42C	106.8	109.4
C4	C3	N4	120.1	119.1
C4	C3	N1	118.1	119.1
C3	C4	H41C	106.8	109.5
C3	C4	H42C	106.8	109.5
N4	C3	N1	121.3	121.8
C3	N4	C10	121.4	121.2
C3	N1	C2	121.8	120.5
C3	N1	H1	119.1	119.7
N4	C10	C11	134.5	134.3
N4	C10	C1	118.0	120.0
C11	C10	C1	107.4	105.7
C10	C11	C12	132.5	134.1
C10	C11	C16	107.2	105.7
C10	C1	O2	107.1	109.0
C10	C1	C2	120.9	118.1
C12	C11	C16	120.3	120.2
C11	C12	C13	112.4	119.7
C11	C12	H12	123.8	120.1
C11	C16	C15	127.6	119.2
C11	C16	O2	105.5	108.3
C12	C13	BR1	117.4	119.9
C12	C13	C14	128.0	120.2
C13	C12	H12	123.8	120.2
BR1	C13	C14	114.6	119.9
C13	C14	C15	118.2	120.6
C13	C14	H14	120.9	119.7
C14	C15	C16	113.4	120.1
C15	C14	H14	120.9	119.7
C14	C15	H15	123.3	119.9
C15	C16	O2	126.8	132.5
C16	C15	H15	123.3	120.0
C16	O2	C1	112.5	111.3
O2	C1	C2	131.6	132.9
C1	C2	O1	124.1	120.8
C1	C2	N1	115.8	118.5
O1	C2	N1	120.0	120.7
C2	N1	H1	119.1	119.8
H51C	C5	H52C	109.5	109.5
H61C	C6	H62C	109.5	109.5
H71C	C7	H72C	109.5	109.5
H71C	C7	H73C	109.5	109.5
H72C	C7	H73C	109.5	109.5
H81C	C8	H82C	109.5	109.5
H91C	C9	H92C	109.5	109.4
H41C	C4	H42C	109.5	109.5

Torsion Angles for HY7

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C5	N2	C9	303.7	300.7
C6	C5	N2	C4	173.7	176.8
N2	C5	C6	H51C	239.9	240.1
N2	C5	C6	H52C	120.1	120.0
C5	C6	N3	C7	186.5	176.8
C5	C6	N3	C8	303.5	300.6
N3	C6	C5	H61C	240.4	240.1
N3	C6	C5	H62C	119.7	120.0
H51C	C5	C6	H52C	240.2	239.9
H61C	C6	C5	H62C	239.3	239.9
N2	C5	C6	N3	48.7	58.4
C6	C5	N2	H51C	120.1	119.9
C6	C5	N2	H52C	239.9	240.0
N2	C5	C6	H61C	168.4	178.4
N2	C5	C6	H62C	289.1	298.4
C8	C9	N2	C5	61.1	59.3
C9	N2	C5	C4	130.1	123.9
C5	N2	C9	H91C	301.8	299.3
C5	N2	C9	H92C	180.4	179.3
C5	N2	C4	C3	78.2	190.0
C5	N2	C4	H41C	199.7	310.0
C5	N2	C4	H42C	316.8	70.0
H51C	C5	N2	H52C	119.8	120.1
N3	C6	C5	N2	48.7	58.4
N3	C6	C5	H51C	168.8	178.4
N3	C6	C5	H52C	288.6	298.5
C5	C6	N3	H61C	119.6	119.9
C5	C6	N3	H62C	240.3	240.0
C7	N3	C6	C8	243.1	236.2
C6	N3	C7	H71C	180.0	60.0
C6	N3	C7	H72C	300.0	180.0
C6	N3	C7	H73C	60.0	299.9
C6	N3	C8	C9	64.1	59.3
C6	N3	C8	H81C	183.7	179.3
C6	N3	C8	H82C	304.4	299.4
H61C	C6	N3	H62C	120.7	120.1
C6	N3	C7	C8	124.7	123.8
C7	N3	C6	H61C	66.9	56.9
C7	N3	C6	H62C	306.2	296.8
C7	N3	C8	C9	186.4	183.1
C7	N3	C8	H81C	306.0	303.1
C7	N3	C8	H82C	66.8	63.2
H71C	C7	N3	H72C	240.0	240.0
H71C	C7	N3	H73C	120.0	120.0
H72C	C7	N3	H73C	240.0	240.0
C6	N3	C8	C7	237.6	236.2
C8	N3	C6	H61C	183.8	180.7
C8	N3	C6	H62C	63.1	60.6
C8	N3	C7	H71C	55.3	296.2
C8	N3	C7	H72C	175.3	56.2
C8	N3	C7	H73C	295.3	176.2
N3	C8	C9	N2	300.4	301.6
C9	C8	N3	H81C	240.4	240.0
C9	C8	N3	H82C	119.6	119.9
N3	C8	C9	H91C	59.7	61.6
N3	C8	C9	H92C	181.1	181.6
H81C	C8	N3	H82C	239.3	239.9
C5	N2	C9	C8	61.1	59.3
N3	C8	C9	H81C	119.6	120.0
N3	C8	C9	H82C	240.4	240.1
C8	C9	N2	C4	190.9	183.2
N2	C9	C8	H91C	240.7	240.0
N2	C9	C8	H92C	119.3	120.0
H81C	C8	C9	H82C	120.8	120.0
H91C	C9	C8	H92C	238.6	240.0
C5	N2	C9	C4	230.2	236.1
C9	N2	C5	H51C	183.6	180.7
C9	N2	C5	H52C	63.9	60.7
N2	C9	C8	H81C	180.9	181.6
N2	C9	C8	H82C	60.1	61.5
C8	C9	N2	H91C	119.3	120.0
C8	C9	N2	H92C	240.7	240.0
C9	N2	C4	C3	305.8	66.2
C9	N2	C4	H41C	67.2	186.2
C9	N2	C4	H42C	184.3	306.2
H91C	C9	N2	H92C	121.4	120.0
C5	N2	C4	C9	132.5	123.8
C4	N2	C5	H51C	53.6	56.8
C4	N2	C5	H52C	293.8	296.8
C4	N2	C9	H91C	71.6	63.2
C4	N2	C9	H92C	310.2	303.2
N2	C4	C3	N4	125.4	0.0
N2	C4	C3	N1	297.2	179.8
C3	C4	N2	H41C	238.5	240.0
C3	C4	N2	H42C	121.5	120.0
H41C	C4	N2	H42C	242.9	240.0
N2	C4	C3	H41C	121.4	120.1
N2	C4	C3	H42C	238.5	240.0
N4	C3	C4	N1	188.2	180.3
C4	C3	N4	C10	175.6	180.0
C4	C3	N1	C2	179.2	179.8
C4	C3	N1	H1	359.2	0.0
H41C	C4	C3	H42C	117.1	120.0
C4	C3	N4	N1	171.6	179.7
N4	C3	C4	H41C	4.0	240.0
N4	C3	C4	H42C	246.9	120.0
N4	C3	N1	C2	350.9	359.5
N4	C3	N1	H1	170.9	179.7
C3	N4	C10	C11	178.2	180.0
C3	N4	C10	C1	358.9	360.0
C4	C3	N1	N4	188.3	180.3
N1	C3	C4	H41C	175.8	59.7
N1	C3	C4	H42C	58.7	299.7
N1	C3	N4	C10	4.0	0.3
C1	C2	N1	C3	10.4	0.5
O1	C2	N1	C3	186.6	180.2
C2	N1	C3	H1	180.0	179.7
C10	N4	C3	N1	4.0	0.3
C11	C10	N4	C1	179.3	180.0
N4	C10	C11	C12	4.6	360.0
N4	C10	C11	C16	181.4	180.0
N4	C10	C1	O2	175.8	180.0
N4	C10	C1	C2	2.9	0.0
N4	C10	C11	C1	180.7	180.0
C11	C10	C1	O2	356.4	360.0
C11	C10	C1	C2	183.4	180.0
C12	C11	C10	C16	183.2	180.0
C10	C11	C12	C13	179.1	180.0
C10	C11	C12	H12	359.1	0.0
C10	C11	C16	C15	179.8	180.0
C10	C11	C16	O2	2.3	0.0
N4	C10	C1	C11	179.5	180.0
C1	C10	C11	C12	183.9	180.0
C1	C10	C11	C16	0.7	0.0
C16	O2	C1	C10	5.4	0.0
O2	C1	C10	C2	172.9	180.0
C10	C1	C2	O1	176.6	180.0
C10	C1	C2	N1	352.6	359.7
C12	C11	C10	C1	183.9	180.0
C10	C11	C12	C16	176.5	180.0
C12	C11	C16	C15	357.1	360.0
C12	C11	C16	O2	179.6	180.0
C11	C12	C13	BR1	176.5	180.0
C11	C12	C13	C14	358.0	0.1
C13	C12	C11	H12	180.0	179.9
C16	C11	C10	C1	0.7	0.0
C10	C11	C16	C12	182.7	180.0
C16	C11	C12	C13	2.6	359.9
C16	C11	C12	H12	182.6	180.0
C14	C15	C16	C11	1.9	0.0
C15	C16	C11	O2	177.5	180.0
C11	C16	C15	H15	182.0	180.0
C11	C16	O2	C1	355.1	360.0
C13	C12	C11	C16	2.6	359.9
C11	C12	C13	H12	180.0	180.1
BR1	C13	C12	C14	178.5	180.0
C12	C13	C14	C15	1.3	360.0
C12	C13	C14	H14	181.3	180.0
C12	C13	BR1	C14	181.3	180.0
BR1	C13	C12	H12	356.5	360.0
BR1	C13	C14	C15	182.8	180.0
BR1	C13	C14	H14	2.8	0.0
C12	C13	C14	BR1	178.5	180.0
C14	C13	C12	H12	178.0	180.0
C13	C14	C15	C16	359.0	360.0
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	H15	178.9	180.0
C11	C16	C15	C14	1.9	0.0
C13	C14	C15	H14	180.0	180.0
C14	C15	C16	O2	178.9	180.0
C16	C15	C14	H15	180.0	180.0
C11	C16	C15	O2	183.0	180.0
C16	C15	C14	H14	179.0	179.9
C14	C15	C16	H15	180.0	180.0
C15	C16	O2	C1	177.6	180.0
C10	C1	O2	C16	5.4	0.0
C11	C16	O2	C15	177.5	180.0
O2	C16	C15	H15	359.0	0.0
C16	O2	C1	C2	177.3	180.0
C10	C1	O2	C2	188.1	180.0
O2	C1	C2	O1	5.6	0.0
O2	C1	C2	N1	181.7	179.7
C3	N1	C2	C1	10.4	0.5
C10	C1	C2	O2	171.0	180.0
O1	C2	C1	N1	183.9	180.3
C1	C2	N1	H1	190.4	180.3
C3	N1	C2	O1	186.6	180.2
C1	C2	O1	N1	175.9	179.7
O1	C2	N1	H1	6.6	360.0
C3	N1	C2	H1	180.0	180.3
C1	C2	N1	O1	183.8	180.3
C6	C5	H51C	N2	239.3	240.1
H51C	C5	C6	N3	168.8	178.4
C6	C5	H51C	H52C	119.7	120.1
H51C	C5	C6	H61C	288.5	298.3
H51C	C5	C6	H62C	49.2	58.4
H51C	C5	N2	C9	183.6	180.7
H51C	C5	N2	C4	53.6	56.8
N2	C5	H51C	H52C	240.4	240.0
C6	C5	H52C	N2	120.7	119.9
H52C	C5	C6	N3	288.6	298.5
C6	C5	H52C	H51C	240.3	239.9
H52C	C5	C6	H61C	48.3	58.4
H52C	C5	C6	H62C	169.0	178.5
H52C	C5	N2	C9	63.9	60.7
H52C	C5	N2	C4	293.8	296.8
N2	C5	H52C	H51C	119.6	120.0
H61C	C6	C5	N2	168.4	178.4
C5	C6	H61C	N3	242.1	240.2
H61C	C6	C5	H51C	288.5	298.3
H61C	C6	C5	H52C	48.3	58.4
C5	C6	H61C	H62C	121.1	120.0
H61C	C6	N3	C7	66.9	56.9
H61C	C6	N3	C8	183.8	180.7
N3	C6	H61C	H62C	239.0	239.9
H62C	C6	C5	N2	289.1	298.4
C5	C6	H62C	N3	117.9	119.9
H62C	C6	C5	H51C	49.2	58.4
H62C	C6	C5	H52C	169.0	178.5
C5	C6	H62C	H61C	239.0	240.0
H62C	C6	N3	C7	306.2	296.8
H62C	C6	N3	C8	63.1	60.6
N3	C6	H62C	H61C	121.0	120.1
H71C	C7	N3	C8	55.3	296.2
N3	C7	H71C	H72C	120.0	120.0
N3	C7	H71C	H73C	240.0	240.0
H72C	C7	H71C	H73C	120.0	120.0
H72C	C7	N3	C8	175.3	56.2
N3	C7	H72C	H71C	240.0	240.0
N3	C7	H72C	H73C	120.0	119.9
H71C	C7	H72C	H73C	240.0	239.9
H73C	C7	N3	C8	295.3	176.2
N3	C7	H73C	H71C	120.0	120.0
N3	C7	H73C	H72C	240.0	240.1
H71C	C7	H73C	H72C	120.0	120.0
N3	C8	H81C	C9	242.2	240.1
N3	C8	H81C	H82C	121.1	120.1
H81C	C8	C9	N2	180.9	181.6
C9	C8	H81C	H82C	238.9	240.0
H81C	C8	C9	H91C	300.2	301.6
H81C	C8	C9	H92C	61.5	61.6
N3	C8	H82C	C9	117.8	119.9
N3	C8	H82C	H81C	238.9	239.9
H82C	C8	C9	N2	60.1	61.5
C9	C8	H82C	H81C	121.1	120.0
H82C	C8	C9	H91C	179.4	181.6
H82C	C8	C9	H92C	300.8	301.6
C8	C9	H91C	N2	244.1	240.0
H91C	C9	C8	H81C	300.2	301.6
H91C	C9	C8	H82C	179.4	181.6
C8	C9	H91C	H92C	122.0	120.0
H91C	C9	N2	C4	71.6	63.2
N2	C9	H91C	H92C	238.0	240.0
C8	C9	H92C	N2	116.0	119.9
H92C	C9	C8	H81C	61.5	61.6
H92C	C9	C8	H82C	300.8	301.6
C8	C9	H92C	H91C	238.0	240.0
H92C	C9	N2	C4	310.2	303.2
N2	C9	H92C	H91C	122.0	120.0
N2	C4	H41C	C3	230.6	239.9
N2	C4	H41C	H42C	115.3	120.0
H41C	C4	C3	N4	4.0	240.0
H41C	C4	C3	N1	175.8	59.7
C3	C4	H41C	H42C	244.7	240.0
N2	C4	H42C	C3	129.4	120.0
N2	C4	H42C	H41C	244.7	240.0
H42C	C4	C3	N4	246.9	120.0
H42C	C4	C3	N1	58.7	299.7
C3	C4	H42C	H41C	115.3	120.0
C3	N1	H1	C2	180.0	179.7
H12	C12	C11	C16	182.6	180.0
C11	C12	H12	C13	180.0	179.9
H12	C12	C13	BR1	356.5	360.0
H12	C12	C13	C14	178.0	180.0
C13	C14	H14	C15	180.0	180.0
H14	C14	C15	C16	179.0	179.9
H14	C14	C15	H15	358.9	360.0
C14	C15	H15	C16	180.0	180.0
H15	C15	C14	H14	358.9	360.0
H15	C15	C16	O2	359.0	0.0