PDB Chemical Component HUP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HUP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.256	1.220
C1	N1	1.374	1.342
C1	C2	1.434	1.405
N1	C5	1.397	1.369
N1	HN1	1.000	0.970
C2	C3	1.357	1.361
C2	H2	1.080	1.080
C3	C4	1.426	1.409
C3	H3	1.081	1.081
C4	C5	1.395	1.347
C4	C12	1.566	1.511
C5	C6	1.488	1.507
C6	C7	1.557	1.533
C6	H61	1.100	1.091
C6	H62	1.100	1.089
C7	C8	1.515	1.505
C7	C11	1.508	1.524
C7	H7	1.100	1.090
C8	C14	1.337	1.293
C8	H8	1.079	1.080
C9	C10	1.487	1.507
C9	H91	1.100	1.091
C9	H92	1.100	1.090
C9	H93	1.100	1.089
C10	C11	1.306	1.310
C10	H10	1.080	1.081
C11	C12	1.508	1.521
C12	N2	1.477	1.469
C12	C13	1.524	1.536
N2	HN21	1.000	1.009
N2	HN22	1.000	1.009
C13	C14	1.485	1.507
C13	H131	1.100	1.090
C13	H132	1.100	1.090
C14	C15	1.513	1.507
C15	H151	1.100	1.090
C15	H152	1.100	1.089
C15	H153	1.100	1.090

Bond Angles for HUP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	N1	120.3	120.1
O1	C1	C2	124.0	120.1
N1	C1	C2	115.7	119.8
C1	N1	C5	124.6	121.7
C1	N1	HN1	117.7	119.1
C1	C2	C3	120.7	118.8
C1	C2	H2	119.6	120.6
C5	N1	HN1	117.7	119.1
N1	C5	C4	119.2	119.7
N1	C5	C6	116.6	116.4
C3	C2	H2	119.6	120.6
C2	C3	C4	122.7	120.0
C2	C3	H3	118.7	120.0
C4	C3	H3	118.7	120.0
C3	C4	C5	117.0	119.9
C3	C4	C12	122.0	116.9
C5	C4	C12	121.1	123.2
C4	C5	C6	124.0	123.8
C4	C12	C11	107.0	108.4
C4	C12	N2	110.3	110.9
C4	C12	C13	110.9	108.3
C5	C6	C7	111.0	110.8
C5	C6	H61	109.1	109.2
C5	C6	H62	109.1	109.3
C7	C6	H61	109.1	109.1
C7	C6	H62	109.1	109.2
C6	C7	C8	112.9	108.9
C6	C7	C11	107.6	106.1
C6	C7	H7	108.2	111.0
H61	C6	H62	109.5	109.2
C8	C7	C11	110.2	107.9
C8	C7	H7	108.8	111.1
C7	C8	C14	123.3	124.1
C7	C8	H8	118.3	118.0
C11	C7	H7	108.9	111.7
C7	C11	C10	125.4	123.4
C7	C11	C12	110.7	113.1
C14	C8	H8	118.3	117.9
C8	C14	C13	121.7	125.6
C8	C14	C15	123.8	117.3
C10	C9	H91	109.5	109.5
C10	C9	H92	109.4	109.4
C10	C9	H93	109.5	109.5
C9	C10	C11	126.7	120.0
C9	C10	H10	116.6	120.0
H91	C9	H92	109.5	109.4
H91	C9	H93	109.5	109.5
H92	C9	H93	109.4	109.5
C11	C10	H10	116.7	120.0
C10	C11	C12	121.6	123.5
C11	C12	N2	112.3	110.8
C11	C12	C13	109.4	106.7
N2	C12	C13	107.1	111.6
C12	N2	HN21	109.5	111.0
C12	N2	HN22	109.5	111.0
C12	C13	C14	114.5	109.7
C12	C13	H131	108.2	109.4
C12	C13	H132	108.2	109.4
HN21	N2	HN22	109.5	111.1
C14	C13	H131	108.2	109.3
C14	C13	H132	108.2	109.7
C13	C14	C15	114.4	117.2
H131	C13	H132	109.5	109.3
C14	C15	H151	109.5	109.4
C14	C15	H152	109.4	109.5
C14	C15	H153	109.5	109.5
H151	C15	H152	109.5	109.5
H151	C15	H153	109.4	109.4
H152	C15	H153	109.5	109.5

Torsion Angles for HUP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	O1	C2	178.7	180.2
O1	C1	N1	C5	179.0	179.9
O1	C1	N1	HN1	359.0	359.8
O1	C1	C2	C3	180.6	179.7
O1	C1	C2	H2	0.6	359.6
O1	C1	N1	C2	181.2	179.8
N1	C1	C2	C3	1.8	359.5
N1	C1	C2	H2	181.8	179.4
C5	N1	C1	HN1	180.0	180.0
C1	N1	C5	C4	0.2	0.7
C1	N1	C5	C6	184.7	181.3
O1	C1	C2	N1	178.8	180.2
C2	C1	N1	C5	357.8	0.1
C2	C1	N1	HN1	177.8	180.0
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	C4	0.5	0.1
C1	C2	C3	H3	180.5	180.1
C5	N1	C1	C2	357.8	0.1
C1	N1	C5	HN1	180.0	180.0
C3	C4	C5	N1	2.1	358.9
N1	C5	C4	C12	184.2	178.5
C4	C5	N1	C6	175.5	179.4
N1	C5	C6	C7	188.7	199.7
N1	C5	C6	H61	308.9	319.9
N1	C5	C6	H62	68.4	79.3
HN1	N1	C1	C2	177.8	180.0
C1	N1	HN1	C5	180.0	180.0
HN1	N1	C5	C4	180.2	180.8
HN1	N1	C5	C6	4.7	1.4
C1	C2	C3	H2	180.0	179.9
C4	C3	C2	H3	180.0	180.0
C2	C3	C4	C5	357.5	0.7
C2	C3	C4	C12	175.5	181.0
C1	C2	H2	C3	180.0	180.1
H2	C2	C3	C4	180.5	180.2
H2	C2	C3	H3	0.5	0.1
N1	C5	C4	C3	2.1	358.9
C4	C3	C2	H2	180.5	180.2
C2	C3	C4	H3	180.0	180.0
C5	C4	C3	C12	182.0	179.7
C3	C4	C5	C6	177.3	178.2
C3	C4	C12	C11	203.5	195.3
C3	C4	C12	N2	326.0	317.1
C3	C4	C12	C13	84.4	79.9
H3	C3	C2	H2	0.5	0.1
C2	C3	H3	C4	180.0	180.0
H3	C3	C4	C5	177.5	180.7
H3	C3	C4	C12	355.5	1.1
C4	C5	N1	HN1	180.2	180.8
N1	C5	C4	C6	184.8	180.7
C5	C4	C3	H3	177.5	180.7
C3	C4	C5	C12	178.0	180.3
C5	C4	C12	C11	21.4	15.6
C5	C4	C12	N2	143.8	137.5
C5	C4	C12	C13	262.3	260.2
C4	C5	C6	C7	13.4	20.3
C4	C5	C6	H61	133.6	140.5
C4	C5	C6	H62	253.1	259.9
C12	C4	C3	H3	355.5	1.1
C3	C4	C12	C5	182.1	179.7
C12	C4	C5	C6	359.3	357.9
C7	C11	C12	C4	303.0	310.6
C10	C11	C12	C4	106.6	130.5
C11	C12	C4	N2	237.6	238.2
C11	C12	C4	C13	119.2	115.4
N2	C12	C4	C13	241.6	237.2
C4	C12	N2	HN21	180.0	60.0
C4	C12	N2	HN22	300.0	184.0
C4	C12	C13	C14	75.6	68.5
C4	C12	C13	H131	196.3	188.4
C4	C12	C13	H132	314.9	308.2
C6	C5	N1	HN1	4.7	1.4
N1	C5	C6	C4	175.3	179.4
C6	C5	C4	C12	359.3	357.9
C7	C6	C5	H61	239.8	239.8
C7	C6	C5	H62	120.2	120.4
C5	C6	C7	C8	75.4	66.1
C5	C6	C7	C11	313.5	310.2
C5	C6	C7	H7	195.9	188.6
H61	C6	C5	H62	240.5	240.6
C5	C6	C7	H61	120.2	120.3
C5	C6	C7	H62	239.8	239.6
H61	C6	C7	H62	119.5	119.3
C8	C7	C6	C11	121.9	115.9
C8	C7	C6	H7	239.4	237.4
C6	C7	C8	C14	259.8	259.8
C6	C7	C8	H8	79.8	79.8
C11	C7	C6	H7	117.5	121.6
C6	C7	C11	C10	269.5	248.4
C6	C7	C11	C12	72.4	68.3
C5	C6	H61	C7	238.6	238.7
C5	C6	H61	H62	119.3	119.4
C7	C6	H61	H62	240.7	240.7
H61	C6	C7	C8	315.1	305.8
H61	C6	C7	C11	193.2	189.9
H61	C6	C7	H7	75.7	68.4
C5	C6	H62	C7	121.4	121.4
C5	C6	H62	H61	240.7	240.6
C7	C6	H62	H61	119.3	119.3
H62	C6	C7	C8	195.6	186.5
H62	C6	C7	C11	73.7	70.6
H62	C6	C7	H7	316.2	309.1
C8	C7	C6	H61	315.1	305.8
C8	C7	C6	H62	195.6	186.5
C6	C7	C8	C11	239.6	245.3
C6	C7	C8	H7	120.2	122.5
C11	C7	C8	H7	240.6	237.3
C8	C7	C11	C10	145.9	131.8
C8	C7	C11	C12	308.8	311.7
C14	C8	C7	H8	180.0	180.0
C7	C8	C14	C13	359.7	359.6
C7	C8	C14	C15	184.3	179.5
C4	C12	C11	C7	303.0	310.6
C11	C7	C6	H61	193.2	189.9
C11	C7	C6	H62	73.7	70.6
C6	C7	C11	C8	123.6	116.5
C6	C7	C11	H7	242.9	238.9
C8	C7	C11	H7	119.3	122.3
C11	C7	C8	C14	20.2	14.5
C11	C7	C8	H8	200.2	194.5
C9	C10	C11	C7	343.6	359.9
C7	C11	C10	H10	163.6	180.0
C10	C11	C7	C12	197.1	180.1
C7	C11	C12	N2	181.8	188.7
C7	C11	C12	C13	63.1	67.1
H7	C7	C6	H61	75.7	68.4
H7	C7	C6	H62	316.2	309.1
C6	C7	H7	C8	236.9	238.7
C6	C7	H7	C11	116.7	118.2
C8	C7	H7	C11	239.8	239.5
H7	C7	C8	C14	139.5	137.2
H7	C7	C8	H8	319.5	317.3
H7	C7	C11	C10	26.6	9.5
H7	C7	C11	C12	189.5	189.4
C14	C8	C7	C11	20.2	14.5
C14	C8	C7	H7	139.5	137.2
C7	C8	C14	H8	180.0	180.0
C12	C13	C14	C8	11.6	18.2
C8	C14	C13	H131	250.9	258.2
C8	C14	C13	H132	132.4	138.4
C13	C14	C8	C15	175.4	180.1
C8	C14	C15	H151	180.0	360.0
C8	C14	C15	H152	300.0	120.0
C8	C14	C15	H153	60.0	240.0
H8	C8	C7	C11	200.2	194.5
H8	C8	C7	H7	319.5	317.3
C7	C8	H8	C14	180.0	180.0
H8	C8	C14	C13	179.7	179.5
H8	C8	C14	C15	4.3	359.4
C7	C11	C10	C9	343.6	359.9
H91	C9	C10	H92	240.0	240.1
H91	C9	C10	H93	120.0	120.0
H92	C9	C10	H93	240.1	240.0
C11	C10	C9	H10	180.0	180.1
C9	C10	C11	C12	182.5	180.1
C10	C9	H91	H92	120.0	119.9
C10	C9	H91	H93	240.0	240.0
H91	C9	C10	C11	180.0	300.1
H91	C9	C10	H10	360.0	120.0
H92	C9	H91	H93	120.0	120.0
C10	C9	H92	H91	240.0	240.1
C10	C9	H92	H93	120.0	120.0
H92	C9	C10	C11	300.0	60.0
H92	C9	C10	H10	120.0	239.9
H91	C9	H92	H93	240.0	240.0
C10	C9	H93	H91	120.0	120.0
C10	C9	H93	H92	240.1	240.0
H93	C9	C10	C11	60.0	180.0
H93	C9	C10	H10	240.0	359.9
H91	C9	H93	H92	120.0	120.0
C4	C12	C11	C10	106.6	130.5
C10	C11	C7	H7	26.6	9.5
C7	C11	C10	C12	161.1	179.9
C11	C10	C9	H91	180.0	300.1
C11	C10	C9	H92	300.0	60.0
C11	C10	C9	H93	60.0	180.0
C9	C10	C11	H10	180.0	179.9
C10	C11	C12	N2	345.4	8.6
C10	C11	C12	C13	226.8	247.0
H10	C10	C9	H91	360.0	120.0
H10	C10	C9	H92	120.0	239.9
H10	C10	C9	H93	240.0	359.9
C9	C10	H10	C11	180.0	180.1
H10	C10	C11	C12	2.5	0.2
C4	C12	C11	N2	121.2	121.9
C4	C12	C11	C13	239.9	243.6
C12	C11	C7	H7	189.5	189.4
C7	C11	C12	C10	196.4	180.1
C12	C11	C10	H10	2.5	0.2
N2	C12	C11	C13	118.7	121.6
C11	C12	N2	HN21	299.2	180.4
C11	C12	N2	HN22	59.2	304.5
C11	C12	C13	C14	317.9	312.0
C11	C12	C13	H131	78.6	71.9
C11	C12	C13	H132	197.1	191.6
C4	C12	N2	C11	240.8	239.5
C4	C12	N2	C13	120.7	120.8
C11	C12	N2	C13	240.0	241.3
N2	C12	C13	C14	196.0	190.8
N2	C12	C13	H131	316.7	310.8
N2	C12	C13	H132	75.2	70.5
HN21	N2	C12	HN22	240.0	236.0
C4	C12	C13	C11	117.7	116.5
C4	C12	C13	N2	239.6	237.7
C8	C14	C13	C12	11.6	18.2
C11	C12	C13	N2	121.9	121.1
C13	C12	N2	HN21	59.3	299.2
C13	C12	N2	HN22	179.3	63.2
C14	C13	C12	H131	239.3	240.1
C14	C13	C12	H132	120.7	120.3
C12	C13	C14	C15	187.4	198.3
H131	C13	C12	H132	241.5	240.3
HN21	N2	C12	C13	59.3	299.2
C12	N2	HN21	HN22	120.0	124.0
HN22	N2	C12	C13	179.3	63.2
C12	N2	HN22	HN21	240.0	236.0
C13	C14	C8	H8	179.7	179.5
C8	C14	C13	C15	184.2	179.9
C12	C13	C14	H131	120.7	120.0
C12	C13	C14	H132	239.3	239.8
H131	C13	C14	H132	118.5	119.8
C13	C14	C15	H151	4.3	179.9
C13	C14	C15	H152	124.3	299.9
C13	C14	C15	H153	244.3	59.9
C12	C13	H131	C14	235.4	239.9
C12	C13	H131	H132	117.7	119.8
C14	C13	H131	H132	242.3	239.9
H131	C13	C14	C15	66.7	78.3
C12	C13	H132	C14	124.6	120.3
C12	C13	H132	H131	242.3	240.2
C14	C13	H132	H131	117.7	119.9
H132	C13	C14	C15	308.2	318.5
C15	C14	C8	H8	4.3	359.4
C8	C14	C15	C13	175.7	180.1
C15	C14	C13	H131	66.7	78.3
C15	C14	C13	H132	308.2	318.5
H151	C15	C14	H152	240.0	240.0
H151	C15	C14	H153	120.0	119.9
H152	C15	C14	H153	240.0	240.0
C14	C15	H151	H152	120.0	120.0
C14	C15	H151	H153	240.0	240.1
H152	C15	H151	H153	120.0	120.0
C14	C15	H152	H151	240.0	240.0
C14	C15	H152	H153	120.0	120.0
H151	C15	H152	H153	240.0	240.0
C14	C15	H153	H151	120.0	119.9
C14	C15	H153	H152	240.0	240.0
H151	C15	H153	H152	120.0	120.0