PDB Chemical Component HT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C1 1.335 1.358
O1 HO1 0.950 0.967
C1 C2 1.401 1.389
C1 C6 1.396 1.389
C2 C3 1.409 1.378
C2 H2 1.080 1.080
C3 C4 1.394 1.396
C3 H3 1.080 1.080
C4 C5 1.403 1.396
C4 C7 1.501 1.478
C5 C6 1.398 1.379
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C7 N1 1.337 1.369
C7 N2 1.330 1.310
N1 C8 1.374 1.383
N1 HN1 1.000 0.970
C8 C9 1.374 1.407
C8 C13 1.373 1.384
C9 N2 1.396 1.349
C9 C10 1.381 1.401
C10 C11 1.380 1.362
C10 H10 1.080 1.079
C11 C12 1.416 1.401
C11 H11 1.080 1.079
C12 C13 1.378 1.394
C12 C14 1.437 1.478
C13 H13 1.080 1.080
C14 N3 1.178 1.370
C14 N4 1.322 1.311
N3 C15 1.366 1.381
N3 HN3 1.000 0.970
C15 C16 1.377 1.407
C15 C20 1.227 1.387
C16 N4 1.383 1.356
C16 C17 1.379 1.399
C17 C18 1.380 1.365
C17 H17 1.080 1.081
C18 C19 1.424 1.394
C18 H18 1.080 1.079
C19 C20 1.390 1.385
C19 N5 1.517 1.399
C20 H20 1.080 1.080
N5 C21 1.186 1.469
N5 C24 1.473 1.470
C21 C22 1.511 1.530
C21 H211 1.100 1.090
C21 H212 1.099 1.090
C22 N6 1.466 1.469
C22 H221 1.100 1.090
C22 H222 1.100 1.091
N6 C23 1.461 1.470
N6 C25 1.453 1.468
C23 C24 1.514 1.530
C23 H231 1.100 1.090
C23 H232 1.100 1.090
C24 H241 1.100 1.090
C24 H242 1.100 1.090
C25 H253 1.100 1.090
C25 H252 1.100 1.090
C25 H251 1.100 1.091

Bond Angles for HT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 O1 HO1 109.5 114.0
O1 C1 C2 122.2 119.9
O1 C1 C6 118.2 119.9
C2 C1 C6 119.7 120.2
C1 C2 C3 120.7 120.1
C1 C2 H2 119.6 120.0
C1 C6 H6 119.8 120.0
C3 C2 H2 119.7 120.0
C2 C3 H3 120.7 120.0
C3 C4 C5 121.2 119.8
C3 C4 C7 119.8 120.1
C5 C4 C7 119.0 120.0
C4 C5 C6 119.4 119.9
C4 C5 H5 120.3 120.1
C4 C7 N1 122.3 125.1
C4 C7 N2 126.1 125.2
C5 C6 H6 119.8 119.9
N1 C7 N2 110.4 109.8
C7 N1 C8 107.7 107.0
C7 N1 HN1 126.1 126.5
C7 N2 C9 107.6 109.8
C8 N1 HN1 126.1 126.5
N1 C8 C9 107.7 106.2
N1 C8 C13 130.0 133.8
C9 C8 C13 122.3 120.0
C8 C9 N2 106.6 107.2
C8 C9 C10 121.5 119.7
C8 C13 C12 117.2 119.6
C8 C13 H13 121.4 120.3
N2 C9 C10 131.9 133.1
C9 C10 C11 117.3 120.1
C9 C10 H10 121.4 120.0
C11 C10 H10 121.4 120.0
C10 C11 C12 120.9 120.5
C10 C11 H11 119.6 119.7
C12 C11 H11 119.6 119.7
C11 C12 C13 120.8 120.2
C11 C12 C14 118.6 119.9
C13 C12 C14 120.6 119.9
C12 C13 H13 121.4 120.2
C12 C14 N3 125.5 125.1
C12 C14 N4 121.0 125.1
N3 C14 N4 113.5 109.7
C14 N3 C15 111.8 107.2
C14 N3 HN3 124.1 126.4
C14 N4 C16 104.5 109.7
C15 N3 HN3 124.1 126.4
N3 C15 C16 103.5 106.2
N3 C15 C20 144.0 133.9
C16 C15 C20 112.5 119.9
C15 C16 N4 106.7 107.2
C15 C16 C17 129.0 119.5
C15 C20 C19 130.5 119.7
C15 C20 H20 114.8 120.2
N4 C16 C17 124.2 133.3
C16 C17 C18 112.3 120.0
C16 C17 H17 123.9 120.0
C18 C17 H17 123.9 120.0
C17 C18 C19 122.3 120.6
C17 C18 H18 118.9 119.7
C19 C18 H18 118.8 119.7
C18 C19 C20 113.4 120.3
C18 C19 N5 116.2 119.8
C20 C19 N5 130.4 119.8
C19 C20 H20 114.8 120.2
C19 N5 C21 109.4 111.0
C19 N5 C24 115.9 111.0
C21 N5 C24 114.8 110.9
N5 C21 C22 114.9 109.3
N5 C21 H211 107.7 109.5
N5 C21 H212 106.5 109.5
N5 C24 C23 112.1 109.4
N5 C24 H241 108.6 109.5
N5 C24 H242 108.0 109.5
C22 C21 H211 107.7 109.5
C22 C21 H212 106.4 109.5
C21 C22 N6 107.8 109.4
C21 C22 H221 110.0 109.5
C21 C22 H222 110.4 109.5
H211 C21 H212 113.8 109.5
N6 C22 H221 110.0 109.5
N6 C22 H222 110.4 109.5
C22 N6 C23 107.2 110.9
C22 N6 C25 113.5 111.0
H221 C22 H222 108.2 109.4
C23 N6 C25 106.5 111.0
N6 C23 C24 104.0 109.4
N6 C23 H231 111.3 109.5
N6 C23 H232 112.5 109.5
N6 C25 H253 109.5 109.5
N6 C25 H252 109.4 109.5
N6 C25 H251 109.5 109.4
C24 C23 H231 111.3 109.5
C24 C23 H232 112.5 109.5
C23 C24 H241 108.6 109.5
C23 C24 H242 108.0 109.5
H231 C23 H232 105.4 109.5
H241 C24 H242 111.6 109.5
H253 C25 H252 109.5 109.5
H253 C25 H251 109.5 109.5
H252 C25 H251 109.5 109.5

Torsion Angles for HT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 C6 179.8 180.3
O1 C1 C2 C3 179.4 180.0
O1 C1 C2 H2 359.4 359.9
O1 C1 C6 H6 359.8 0.0
HO1 O1 C1 C2 135.3 90.0
HO1 O1 C1 C6 315.5 269.7
C2 C1 O1 HO1 135.3 90.0
O1 C1 C2 C6 180.2 179.7
C2 C1 C6 H6 180.0 179.7
C3 C2 C1 H2 180.0 180.1
C1 C2 C3 H3 180.6 180.0
C6 C1 O1 HO1 315.5 269.7
O1 C1 C6 C2 179.8 180.3
C6 C1 C2 C3 359.2 0.3
C6 C1 C2 H2 179.2 180.3
C4 C5 C6 C1 0.8 360.0
C5 C6 C1 H6 180.0 180.0
C3 C2 C1 C6 359.2 0.3
C1 C2 C3 H2 180.0 179.9
C2 C3 C4 C5 0.3 359.8
C2 C3 C4 C7 180.0 180.1
H2 C2 C1 C6 179.2 180.3
C1 C2 H2 C3 180.0 180.1
H2 C2 C3 H3 0.6 0.0
C1 C2 C3 C4 0.6 360.0
C5 C4 C3 C7 180.3 179.7
C3 C4 C5 C6 359.0 0.3
C3 C4 C5 H5 179.0 180.0
C3 C4 C7 N1 203.9 359.7
C3 C4 C7 N2 37.2 179.4
H3 C3 C2 H2 0.6 0.0
H3 C3 C4 C5 180.3 179.7
H3 C3 C4 C7 0.0 0.0
C3 C4 C5 C7 179.7 180.3
C5 C4 C7 N1 23.6 180.0
C5 C4 C7 N2 216.9 359.7
C4 C5 C6 H6 180.8 180.0
C3 C4 C7 C5 180.3 179.7
C7 C4 C5 C6 179.3 180.0
C7 C4 C5 H5 359.3 359.7
N1 C7 C4 N2 166.6 180.2
C4 C7 N1 C8 191.4 180.0
C4 C7 N1 HN1 11.4 0.0
C4 C7 N2 C9 167.7 179.9
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 C7 179.3 180.0
C4 C5 C6 H5 180.0 179.8
H5 C5 C4 C7 359.3 359.7
C4 C5 H5 C6 180.0 180.2
H5 C5 C6 H6 0.8 0.3
C4 C7 N1 N2 191.5 179.8
N1 C7 N2 C9 359.7 359.7
C8 N1 C7 HN1 180.0 179.9
C7 N1 C8 C9 0.5 0.0
C7 N1 C8 C13 179.9 180.0
C4 C7 N2 N1 168.0 180.2
N2 C7 N1 C8 359.9 0.2
N2 C7 N1 HN1 179.9 180.2
C8 C9 N2 C7 0.6 0.3
C7 N2 C9 C10 180.1 180.1
C8 N1 C7 N2 359.9 0.2
C7 N1 C8 HN1 180.0 180.1
C9 C8 N1 C13 180.5 180.1
N1 C8 C9 N2 359.4 359.8
N1 C8 C9 C10 179.7 180.0
N1 C8 C13 C12 180.5 180.0
N1 C8 C13 H13 0.5 0.0
HN1 N1 C7 N2 179.9 180.2
C7 N1 HN1 C8 180.0 179.9
HN1 N1 C8 C9 180.5 180.0
HN1 N1 C8 C13 359.9 359.9
C7 N2 C9 C8 0.6 0.3
C9 C8 N1 HN1 180.5 180.0
N1 C8 C9 C13 179.5 179.9
C9 C8 C13 C12 359.9 359.9
C9 C8 C13 H13 179.9 180.0
N2 C9 C8 C10 179.6 179.8
C8 C9 C10 C11 0.0 0.0
C8 C9 C10 H10 180.0 180.0
C13 C8 N1 HN1 359.9 359.9
N1 C8 C13 C9 180.6 180.1
C13 C8 C9 N2 179.8 179.8
C13 C8 C9 C10 0.2 0.0
C11 C12 C13 C8 359.7 0.1
C8 C13 C12 C14 180.7 180.1
C12 C13 C8 H13 180.0 180.0
N2 C9 C8 C13 179.8 179.8
C8 C9 N2 C10 180.4 180.2
N2 C9 C10 C11 180.5 180.3
N2 C9 C10 H10 0.5 0.2
C10 C9 C8 C13 0.2 0.0
C8 C9 C10 N2 179.5 179.8
C11 C10 C9 H10 180.0 180.0
C9 C10 C11 C12 359.6 360.0
C9 C10 C11 H11 179.6 180.0
C9 C10 C11 H10 180.0 180.0
C12 C11 C10 H11 180.0 180.0
C10 C11 C12 C13 0.6 360.0
C10 C11 C12 C14 179.6 180.0
C9 C10 H10 C11 180.0 180.0
H10 C10 C11 C12 179.6 180.0
H10 C10 C11 H11 359.6 0.0
C8 C13 C12 C11 359.7 0.1
C12 C11 C10 H10 179.6 180.0
C10 C11 C12 H11 180.0 180.0
C13 C12 C11 C14 181.0 180.0
C11 C12 C13 H13 179.7 180.1
C11 C12 C14 N3 181.1 0.0
C11 C12 C14 N4 0.6 179.7
H11 C11 C10 H10 359.6 0.0
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 180.5 180.0
H11 C11 C12 C14 359.6 360.0
C8 C13 C12 H13 180.0 180.0
C13 C12 C11 H11 180.5 180.0
C11 C12 C13 C14 179.0 180.0
C13 C12 C14 N3 0.2 180.1
C13 C12 C14 N4 179.6 359.7
C14 C12 C11 H11 359.6 360.0
C11 C12 C14 C13 181.0 180.0
C14 C12 C13 H13 0.7 0.0
N3 C14 C12 N4 180.5 180.4
C12 C14 N3 C15 180.2 179.9
C12 C14 N3 HN3 0.2 359.9
C12 C14 N4 C16 179.7 179.9
C8 C13 H13 C12 180.0 180.0
H13 C13 C12 C14 0.7 0.0
C12 C14 N3 N4 179.5 179.7
N3 C14 N4 C16 359.2 359.6
C15 N3 C14 HN3 180.0 180.0
C14 N3 C15 C16 359.7 360.0
C14 N3 C15 C20 179.3 180.0
C12 C14 N4 N3 180.5 180.3
N4 C14 N3 C15 0.7 0.3
N4 C14 N3 HN3 180.7 180.2
C15 C16 N4 C14 0.6 0.4
C14 N4 C16 C17 180.5 180.2
C15 N3 C14 N4 0.7 0.3
C14 N3 C15 HN3 180.0 180.0
C16 C15 N3 C20 180.4 180.0
N3 C15 C16 N4 359.8 359.8
N3 C15 C16 C17 179.9 180.0
N3 C15 C20 C19 180.5 180.0
N3 C15 C20 H20 0.5 0.0
HN3 N3 C14 N4 180.7 180.2
C14 N3 HN3 C15 180.0 180.0
HN3 N3 C15 C16 179.7 180.0
HN3 N3 C15 C20 359.3 0.0
C14 N4 C16 C15 0.6 0.4
C16 C15 N3 HN3 179.7 180.0
N3 C15 C16 C20 179.8 180.0
C16 C15 C20 C19 0.1 0.0
C16 C15 C20 H20 180.1 180.0
N4 C16 C15 C17 179.9 179.9
C15 C16 C17 C18 359.9 0.0
C15 C16 C17 H17 179.8 180.0
C20 C15 N3 HN3 359.3 0.0
N3 C15 C20 C16 180.4 180.0
C20 C15 C16 N4 180.0 179.8
C20 C15 C16 C17 0.1 360.0
C18 C19 C20 C15 359.8 0.0
C15 C20 C19 N5 180.5 180.0
C19 C20 C15 H20 180.0 180.0
N4 C16 C15 C20 180.0 179.8
C15 C16 N4 C17 180.1 180.2
N4 C16 C17 C18 180.0 180.2
N4 C16 C17 H17 360.0 0.1
C17 C16 C15 C20 0.1 360.0
C15 C16 C17 N4 179.9 179.8
C18 C17 C16 H17 180.0 180.1
C16 C17 C18 C19 360.0 0.0
C16 C17 C18 H18 179.9 180.0
C16 C17 C18 H17 180.0 179.9
C19 C18 C17 H18 180.0 180.0
C17 C18 C19 C20 0.2 359.9
C17 C18 C19 N5 179.5 180.0
C16 C17 H17 C18 180.0 180.1
H17 C17 C18 C19 180.0 180.1
H17 C17 C18 H18 360.0 0.1
C15 C20 C19 C18 359.8 0.0
C19 C18 C17 H17 180.0 180.1
C17 C18 C19 H18 180.0 180.0
C20 C19 C18 N5 180.7 180.0
C18 C19 C20 H20 179.8 180.0
C18 C19 N5 C21 322.5 359.9
C18 C19 N5 C24 190.8 236.2
H18 C18 C17 H17 360.0 0.1
C17 C18 H18 C19 180.0 180.0
H18 C18 C19 C20 180.2 180.0
H18 C18 C19 N5 359.6 0.0
C15 C20 C19 H20 180.0 180.0
C20 C19 C18 H18 180.2 180.0
C18 C19 C20 N5 179.2 180.0
C20 C19 N5 C21 141.7 180.0
C20 C19 N5 C24 10.0 56.2
N5 C19 C18 H18 359.6 0.0
C18 C19 N5 C20 180.8 180.0
N5 C19 C20 H20 0.5 360.0
C21 N5 C19 C24 131.7 123.7
C19 N5 C21 C22 175.4 176.8
C19 N5 C21 H211 295.4 296.8
C19 N5 C21 H212 57.9 56.9
C19 N5 C24 C23 182.4 183.2
C19 N5 C24 H241 302.4 303.1
C19 N5 C24 H242 63.5 63.2
C15 C20 H20 C19 180.0 180.0
H20 C20 C19 N5 0.5 360.0
C19 N5 C21 C24 227.7 236.2
C21 N5 C24 C23 53.3 59.4
C21 N5 C24 H241 173.3 179.3
C21 N5 C24 H242 294.4 299.4
C22 C21 N5 H211 240.0 240.1
C22 C21 N5 H212 117.6 119.9
N5 C21 C22 N6 58.5 58.4
N5 C21 C22 H221 178.5 178.4
N5 C21 C22 H222 297.9 298.4
H211 C21 N5 H212 237.6 239.9
C19 N5 C24 C21 129.1 123.8
C24 N5 C21 C22 307.7 300.6
C24 N5 C21 H211 67.7 60.6
C24 N5 C21 H212 190.2 180.7
N6 C23 C24 N5 303.8 301.6
N5 C24 C23 H231 183.8 181.5
N5 C24 C23 H232 65.8 61.5
C23 C24 N5 H241 240.0 240.0
C23 C24 N5 H242 118.9 120.0
H241 C24 N5 H242 238.9 239.9
C22 C21 N5 C24 307.7 300.6
N5 C21 C22 H211 120.0 120.0
N5 C21 C22 H212 242.4 240.1
H211 C21 C22 H212 122.4 120.1
N6 C22 C21 H221 240.0 240.0
N6 C22 C21 H222 120.7 120.0
C21 C22 N6 C23 296.9 300.7
C21 C22 N6 C25 179.6 176.8
H221 C22 C21 H222 240.6 240.0
H211 C21 N5 C24 67.7 60.6
N5 C21 H211 C22 235.5 240.1
N5 C21 H211 H212 117.8 120.1
C22 C21 H211 H212 242.3 239.9
H211 C21 C22 N6 298.5 298.4
H211 C21 C22 H221 58.5 58.4
H211 C21 C22 H222 177.9 178.4
H212 C21 N5 C24 190.2 180.7
N5 C21 H212 C22 123.0 119.9
N5 C21 H212 H211 241.5 239.9
C22 C21 H212 H211 118.5 120.0
H212 C21 C22 N6 176.1 178.4
H212 C21 C22 H221 296.1 298.4
H212 C21 C22 H222 55.5 58.3
N6 C22 C21 H211 298.5 298.4
N6 C22 C21 H212 176.1 178.4
C21 C22 N6 H221 120.0 120.0
C21 C22 N6 H222 239.4 240.0
H221 C22 N6 H222 119.4 120.0
C23 N6 C22 C25 117.3 123.9
C22 N6 C23 C24 63.2 59.3
C22 N6 C23 H231 183.2 179.3
C22 N6 C23 H232 301.2 299.3
C22 N6 C25 H253 321.2 59.9
C22 N6 C25 H252 81.2 180.0
C22 N6 C25 H251 201.1 300.0
H221 C22 C21 H211 58.5 58.4
H221 C22 C21 H212 296.1 298.4
C21 C22 H221 N6 241.3 240.0
C21 C22 H221 H222 120.7 120.0
N6 C22 H221 H222 239.3 240.0
H221 C22 N6 C23 176.9 180.7
H221 C22 N6 C25 59.6 56.8
H222 C22 C21 H211 177.9 178.4
H222 C22 C21 H212 55.5 58.3
C21 C22 H222 N6 119.1 120.0
C21 C22 H222 H221 239.6 240.0
N6 C22 H222 H221 120.4 120.0
H222 C22 N6 C23 57.6 60.7
H222 C22 N6 C25 300.3 296.9
N5 C24 C23 N6 303.8 301.6
C23 N6 C22 H221 176.9 180.7
C23 N6 C22 H222 57.6 60.7
C22 N6 C23 C25 238.2 236.1
C23 N6 C25 H253 203.4 296.1
C23 N6 C25 H252 323.4 56.2
C23 N6 C25 H251 83.4 176.2
C24 C23 N6 H231 240.0 240.0
C24 C23 N6 H232 122.0 119.9
N6 C23 C24 H241 183.8 181.7
N6 C23 C24 H242 62.7 61.6
H231 C23 N6 H232 242.0 240.0
C25 N6 C22 H221 59.6 56.8
C25 N6 C22 H222 300.3 296.9
C22 N6 C25 C23 117.7 123.8
C25 N6 C23 C24 185.0 183.2
C25 N6 C23 H231 305.1 303.2
C25 N6 C23 H232 63.0 63.2
H253 C25 N6 H252 240.0 239.9
H253 C25 N6 H251 120.0 120.0
H252 C25 N6 H251 240.0 240.0
N5 C24 C23 H241 120.0 119.9
N5 C24 C23 H242 241.1 240.0
C24 C23 N6 C25 185.0 183.2
N6 C23 C24 H231 120.0 120.1
N6 C23 C24 H232 238.0 240.1
H231 C23 C24 H232 118.0 120.0
H241 C24 C23 H242 121.2 120.1
H231 C23 N6 C25 305.1 303.2
N6 C23 H231 C24 244.4 240.0
N6 C23 H231 H232 122.2 120.0
C24 C23 H231 H232 237.8 240.0
H231 C23 C24 H241 63.8 61.6
H231 C23 C24 H242 302.7 301.5
H232 C23 N6 C25 63.0 63.2
N6 C23 H232 C24 117.1 119.9
N6 C23 H232 H231 238.6 239.9
C24 C23 H232 H231 121.5 120.0
H232 C23 C24 H241 305.8 301.6
H232 C23 C24 H242 184.7 181.5
N5 C24 H241 C23 237.9 240.1
N5 C24 H241 H242 118.9 120.1
H241 C24 C23 H231 63.8 61.6
H241 C24 C23 H232 305.8 301.6
C23 C24 H241 H242 241.0 240.0
N5 C24 H242 C23 121.5 119.9
N5 C24 H242 H241 240.8 239.9
H242 C24 C23 H231 302.7 301.5
H242 C24 C23 H232 184.7 181.5
C23 C24 H242 H241 119.3 120.1
N6 C25 H253 H252 120.0 120.1
N6 C25 H253 H251 240.0 240.0
H252 C25 H253 H251 120.0 120.0
N6 C25 H252 H253 240.0 239.9
N6 C25 H252 H251 120.0 119.9
H253 C25 H252 H251 240.0 240.0
N6 C25 H251 H253 120.0 120.0
N6 C25 H251 H252 240.0 240.0
H253 C25 H251 H252 120.0 120.0