PDB Chemical Component HSY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HSY

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.530	1.531
C1	O5	1.434	1.429
C1	O1	1.430	1.429
C1	H1	1.100	1.090
C2	C3	1.528	1.532
C2	O2	1.406	1.428
C2	H2	1.100	1.091
C3	C4	1.504	1.532
C3	O3	1.406	1.429
C3	H3	1.100	1.089
C4	C5	1.497	1.530
C4	O4	1.426	1.429
C4	H4	1.100	1.090
C5	O5	1.417	1.429
C5	H51	1.100	1.090
C5	H52	1.100	1.090
O2	HO2	0.950	0.968
O3	HO3	0.950	0.967
O4	HO4	0.949	0.968
O1	HO1	0.950	0.968

Bond Angles for HSY

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	108.4	109.4
C2	C1	O1	109.9	109.4
C2	C1	H1	110.0	109.5
C1	C2	C3	107.8	109.1
C1	C2	O2	112.1	109.6
C1	C2	H2	110.0	109.5
O5	C1	O1	109.8	109.5
O5	C1	H1	110.1	109.5
C1	O5	C5	122.2	114.1
O1	C1	H1	108.7	109.5
C1	O1	HO1	109.5	114.0
C3	C2	O2	112.7	109.5
C3	C2	H2	109.4	109.5
C2	C3	C4	109.8	109.1
C2	C3	O3	111.5	109.5
C2	C3	H3	108.5	109.5
O2	C2	H2	104.9	109.6
C2	O2	HO2	109.5	114.0
C4	C3	O3	111.2	109.6
C4	C3	H3	108.8	109.6
C3	C4	C5	117.0	109.2
C3	C4	O4	106.8	109.5
C3	C4	H4	109.7	109.5
O3	C3	H3	106.9	109.6
C3	O3	HO3	109.5	114.0
C5	C4	O4	117.8	109.5
C5	C4	H4	95.9	109.5
C4	C5	O5	119.1	109.4
C4	C5	H51	106.4	109.5
C4	C5	H52	106.4	109.5
O4	C4	H4	108.7	109.6
C4	O4	HO4	109.5	113.9
O5	C5	H51	106.4	109.5
O5	C5	H52	106.4	109.4
H51	C5	H52	112.4	109.5

Torsion Angles for HSY

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	O1	240.0	240.0
O5	C1	C2	H1	120.4	120.0
C2	C1	O5	C5	34.8	61.1
O1	C1	C2	H1	240.4	240.0
C2	C1	O1	HO1	180.0	180.0
C3	C2	C1	O2	124.6	119.9
C3	C2	C1	H2	240.8	240.2
C1	C2	C3	C4	62.3	56.9
C1	C2	C3	O3	186.0	176.8
C1	C2	C3	H3	303.5	297.0
O2	C2	C1	H2	116.2	120.2
C1	C2	O2	HO2	180.0	300.0
C2	C1	O5	O1	120.0	119.9
C2	C1	O5	H1	239.6	240.0
O5	C1	C2	C3	295.9	302.4
O5	C1	C2	O2	171.3	182.5
O5	C1	C2	H2	55.1	62.3
O1	C1	O5	H1	119.6	120.1
O5	C1	O1	HO1	299.2	299.9
C4	C5	O5	C1	357.2	298.9
C1	O5	C5	H51	237.2	178.9
C1	O5	C5	H52	117.2	58.9
C2	C1	O1	O5	240.9	240.1
C2	C1	O1	H1	120.4	120.0
O1	C1	C2	C3	55.8	62.4
O1	C1	C2	O2	291.3	302.5
O1	C1	C2	H2	175.0	182.2
O5	C1	O1	H1	239.5	239.9
O1	C1	O5	C5	274.8	301.2
C2	C1	H1	O5	119.4	120.0
C2	C1	H1	O1	239.7	240.0
H1	C1	C2	C3	175.4	182.4
H1	C1	C2	O2	50.9	62.5
H1	C1	C2	H2	294.6	302.3
O5	C1	H1	O1	120.3	120.0
H1	C1	O5	C5	155.2	181.1
H1	C1	O1	HO1	59.6	59.9
C3	C2	C1	O5	295.9	302.4
C3	C2	C1	O1	55.8	62.4
C3	C2	C1	H1	175.4	182.4
C1	C2	C3	O2	235.8	240.1
C1	C2	C3	H2	119.6	119.8
O2	C2	C3	H2	243.8	239.8
C3	C2	O2	HO2	58.2	180.3
C4	C3	C2	O3	236.3	240.1
C4	C3	C2	H3	118.8	119.9
C2	C3	C4	C5	329.7	303.0
C2	C3	C4	O4	195.1	183.1
C2	C3	C4	H4	77.4	62.9
O3	C3	C2	H3	242.5	239.8
C2	C3	O3	HO3	180.0	180.0
O2	C2	C1	O5	171.3	182.5
O2	C2	C1	O1	291.3	302.5
O2	C2	C1	H1	50.9	62.5
C1	C2	O2	C3	121.8	119.7
C1	C2	O2	H2	240.7	239.8
C3	C2	O2	H2	118.9	120.2
O2	C2	C3	C4	186.5	176.9
O2	C2	C3	O3	310.2	296.8
O2	C2	C3	H3	67.7	57.0
H2	C2	C1	O5	55.1	62.3
H2	C2	C1	O1	175.0	182.2
H2	C2	C1	H1	294.6	302.3
C1	C2	H2	C3	241.7	240.4
C1	C2	H2	O2	120.7	120.2
C3	C2	H2	O2	238.9	239.8
H2	C2	C3	C4	302.7	297.1
H2	C2	C3	O3	66.4	57.0
H2	C2	C3	H3	183.9	177.2
H2	C2	O2	HO2	299.3	60.2
C4	C3	C2	O2	186.5	176.9
C4	C3	C2	H2	302.7	297.1
C2	C3	C4	O3	123.9	119.8
C2	C3	C4	H3	241.4	240.1
O3	C3	C4	H3	117.5	120.3
C4	C3	O3	HO3	302.9	299.6
C5	C4	C3	O4	134.6	119.9
C5	C4	C3	H4	252.2	240.1
C3	C4	C5	O5	0.3	57.6
C3	C4	C5	H51	120.3	177.6
C3	C4	C5	H52	240.3	297.7
O4	C4	C3	H4	117.6	120.2
C3	C4	O4	HO4	180.0	180.0
O3	C3	C2	O2	310.2	296.8
O3	C3	C2	H2	66.4	57.0
C2	C3	O3	C4	237.1	240.4
C2	C3	O3	H3	118.5	120.2
C4	C3	O3	H3	241.3	239.7
O3	C3	C4	C5	205.8	183.2
O3	C3	C4	O4	71.2	63.3
O3	C3	C4	H4	313.6	303.1
H3	C3	C2	O2	67.7	57.0
H3	C3	C2	H2	183.9	177.2
C2	C3	H3	C4	119.4	119.6
C2	C3	H3	O3	239.6	239.8
C4	C3	H3	O3	120.2	120.3
H3	C3	C4	C5	88.3	62.9
H3	C3	C4	O4	313.7	303.0
H3	C3	C4	H4	196.1	182.8
H3	C3	O3	HO3	61.6	59.8
C1	O5	C5	C4	357.2	298.9
C5	C4	C3	O3	205.8	183.2
C5	C4	C3	H3	88.3	62.9
C3	C4	C5	O4	230.4	240.1
C3	C4	C5	H4	115.6	119.9
O4	C4	C5	H4	245.2	239.8
C5	C4	O4	HO4	45.8	60.3
O5	C5	C4	H51	240.0	240.0
O5	C5	C4	H52	120.0	119.9
H51	C5	C4	H52	240.0	239.9
O4	C4	C3	O3	71.2	63.3
O4	C4	C3	H3	313.7	303.0
C3	C4	O4	C5	134.2	119.7
C3	C4	O4	H4	241.7	239.9
C5	C4	O4	H4	107.6	120.2
O4	C4	C5	O5	129.8	177.5
O4	C4	C5	H51	249.8	297.4
O4	C4	C5	H52	9.8	57.5
H4	C4	C3	O3	313.6	303.1
H4	C4	C3	H3	196.1	182.8
C3	C4	H4	C5	238.5	240.3
C3	C4	H4	O4	116.5	120.1
C5	C4	H4	O4	237.9	239.8
H4	C4	C5	O5	244.6	297.7
H4	C4	C5	H51	4.6	57.6
H4	C4	C5	H52	124.6	177.7
H4	C4	O4	HO4	298.3	300.2
C5	O5	C1	O1	274.8	301.2
C5	O5	C1	H1	155.2	181.1
O5	C5	C4	O4	129.8	177.5
O5	C5	C4	H4	244.6	297.7
C4	C5	O5	H51	120.0	120.0
C4	C5	O5	H52	240.0	240.0
H51	C5	O5	H52	120.0	120.0
H51	C5	C4	O4	249.8	297.4
H51	C5	C4	H4	4.6	57.6
C4	C5	H51	O5	232.1	240.1
C4	C5	H51	H52	116.1	120.1
O5	C5	H51	H52	244.0	240.0
H52	C5	C4	O4	9.8	57.5
H52	C5	C4	H4	124.6	177.7
C4	C5	H52	O5	128.0	119.9
C4	C5	H52	H51	244.0	239.9
O5	C5	H52	H51	116.0	120.0
HO2	O2	C2	H2	299.3	60.2
HO3	O3	C3	H3	61.6	59.8
HO4	O4	C4	H4	298.3	300.2
HO1	O1	C1	H1	59.6	59.9