PDB Chemical Component HSX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HSX

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O4 C1 1.437 1.438
C1 O1 1.437 1.430
C1 C2 1.525 1.540
C1 H1 1.100 1.090
O4 C4 1.448 1.445
C3 C2 1.528 1.549
C2 O2 1.438 1.429
C2 H2 1.100 1.090
O2 HO2 0.950 0.967
C4 C3 1.526 1.549
C3 O3 1.439 1.430
C3 H3 1.100 1.089
O3 HO3 0.950 0.967
C5 C4 1.525 1.530
C4 H4 1.100 1.090
O5 C5 1.433 1.429
C5 H51 1.100 1.090
C5 H52 1.099 1.089
P' O5 1.607 1.611
O1X P' 1.473 1.480
O3X P' 1.608 1.610
P' O2X 1.607 1.610
O2X HO2X 0.950 0.967
O3X HO3X 0.950 0.967
O1 HO1 0.950 0.967

Bond Angles for HSX

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O4 C1 O1 112.8 109.9
O4 C1 C2 105.1 107.4
O4 C1 H1 109.3 110.0
C2 C1 O1 106.7 109.9
O1 C1 H1 107.8 109.8
C1 O1 HO1 109.5 114.0
C2 C1 H1 115.2 109.9
C1 C2 O2 107.7 110.5
C1 C2 H2 118.1 110.5
O4 C4 C3 107.7 103.5
O4 C4 H4 111.5 110.6
C3 C2 H2 115.1 110.6
O2 C2 H2 106.6 110.5
C2 O2 HO2 109.5 113.9
C4 C3 H3 115.4 111.0
O3 C3 H3 109.0 110.8
C3 O3 HO3 109.5 114.0
C5 C4 H4 107.6 110.7
O5 C5 H51 111.2 109.5
O5 C5 H52 112.3 109.4
H51 C5 H52 105.6 109.5
O1X P' O2X 109.6 109.5
P' O2X HO2X 109.5 114.0

Torsion Angles for HSX

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O4 O1 244.1 240.5
O1 C1 O4 H1 240.1 239.0
O4 C1 O1 HO1 19.3 62.0
C2 C1 O4 H1 124.2 119.5
O4 C1 C2 O2 161.3 120.6
O4 C1 C2 H2 282.0 243.2
O4 C1 O1 C2 245.1 242.1
O4 C1 O1 H1 120.8 121.1
C2 C1 O1 H1 235.8 239.0
O1 C1 C2 O2 41.2 1.2
O1 C1 C2 H2 161.9 123.8
O4 C1 C2 O1 120.1 119.5
O4 C1 C2 H1 239.6 240.4
O1 C1 C2 H1 119.6 121.0
C2 C1 O1 HO1 134.2 180.0
C3 C2 C1 H2 124.1 118.8
O2 C2 C1 H2 239.3 237.4
C1 C2 O2 HO2 301.8 61.6
O4 C1 H1 O1 237.0 239.0
O4 C1 H1 C2 118.0 118.0
C2 C1 H1 O1 119.0 121.0
H1 C1 O1 HO1 258.5 300.9
H1 C1 C2 O2 281.7 240.2
H1 C1 C2 H2 42.4 2.8
C4 O4 C1 O1 73.9 93.0
C4 O4 C1 C2 318.0 333.5
C4 O4 C1 H1 193.8 214.0
O4 C4 C3 H3 130.8 81.2
C5 C4 O4 H4 241.2 237.1
C3 C2 C1 O1 286.1 242.6
C3 C2 C1 H1 166.5 121.6
C1 C2 C3 H2 233.7 241.2
O4 C4 C3 C2 8.9 323.0
O2 C2 C3 H2 121.2 122.6
C3 C2 O2 HO2 48.1 176.3
O2 C2 C1 O1 41.2 1.2
O2 C2 C1 H1 281.7 240.2
C1 C2 O2 H2 127.7 122.6
C3 C2 O2 H2 233.9 237.3
H2 C2 C1 O1 161.9 123.8
H2 C2 C1 H1 42.4 2.8
C1 C2 H2 O2 238.7 237.4
H2 C2 O2 HO2 174.1 298.9
HO2 O2 C2 H2 174.1 298.9
O4 C4 C3 H4 238.8 241.5
C4 C3 C2 H2 94.4 139.6
O3 C3 C4 H3 120.9 123.6
C4 C3 O3 HO3 345.7 174.2
O4 C4 C3 O3 251.6 204.8
O3 C3 C2 H2 208.2 257.8
C4 C3 O3 H3 235.0 236.3
H3 C3 C2 H2 329.6 21.4
H3 C3 O3 HO3 110.6 297.9
HO3 O3 C3 H3 110.6 297.9
O4 C4 C5 H4 121.2 122.9
C5 C4 C3 H3 10.8 322.7
O4 C4 H4 C3 118.9 114.1
H4 C4 C3 H3 252.0 199.7
O5 C5 C4 H4 305.4 303.5
H51 C5 O5 H52 118.1 120.0
H51 C5 C4 H4 65.4 63.5
O5 C5 H51 H52 237.9 240.0
H52 C5 C4 H4 183.5 183.5
O5 C5 H52 H51 121.3 120.0
P' O5 C5 H51 10.0 60.0
P' O5 C5 H52 252.0 300.0
O1X P' O2X HO2X 50.8 180.0
O3X P' O2X HO2X 286.4 300.0
HO1 O1 C1 H1 258.5 300.9