PDB Chemical Component HSX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HSX
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O4 |
C1 |
1.437 |
1.438 |
C1 |
O1 |
1.437 |
1.430 |
C1 |
C2 |
1.525 |
1.540 |
C1 |
H1 |
1.100 |
1.090 |
O4 |
C4 |
1.448 |
1.445 |
C3 |
C2 |
1.528 |
1.549 |
C2 |
O2 |
1.438 |
1.429 |
C2 |
H2 |
1.100 |
1.090 |
O2 |
HO2 |
0.950 |
0.967 |
C4 |
C3 |
1.526 |
1.549 |
C3 |
O3 |
1.439 |
1.430 |
C3 |
H3 |
1.100 |
1.089 |
O3 |
HO3 |
0.950 |
0.967 |
C5 |
C4 |
1.525 |
1.530 |
C4 |
H4 |
1.100 |
1.090 |
O5 |
C5 |
1.433 |
1.429 |
C5 |
H51 |
1.100 |
1.090 |
C5 |
H52 |
1.099 |
1.089 |
P' |
O5 |
1.607 |
1.611 |
O1X |
P' |
1.473 |
1.480 |
O3X |
P' |
1.608 |
1.610 |
P' |
O2X |
1.607 |
1.610 |
O2X |
HO2X |
0.950 |
0.967 |
O3X |
HO3X |
0.950 |
0.967 |
O1 |
HO1 |
0.950 |
0.967 |
Bond Angles for HSX
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O4 |
C1 |
O1 |
112.8 |
109.9 |
O4 |
C1 |
C2 |
105.1 |
107.4 |
O4 |
C1 |
H1 |
109.3 |
110.0 |
C2 |
C1 |
O1 |
106.7 |
109.9 |
O1 |
C1 |
H1 |
107.8 |
109.8 |
C1 |
O1 |
HO1 |
109.5 |
114.0 |
C2 |
C1 |
H1 |
115.2 |
109.9 |
C1 |
C2 |
O2 |
107.7 |
110.5 |
C1 |
C2 |
H2 |
118.1 |
110.5 |
O4 |
C4 |
C3 |
107.7 |
103.5 |
O4 |
C4 |
H4 |
111.5 |
110.6 |
C3 |
C2 |
H2 |
115.1 |
110.6 |
O2 |
C2 |
H2 |
106.6 |
110.5 |
C2 |
O2 |
HO2 |
109.5 |
113.9 |
C4 |
C3 |
H3 |
115.4 |
111.0 |
O3 |
C3 |
H3 |
109.0 |
110.8 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
C5 |
C4 |
H4 |
107.6 |
110.7 |
O5 |
C5 |
H51 |
111.2 |
109.5 |
O5 |
C5 |
H52 |
112.3 |
109.4 |
H51 |
C5 |
H52 |
105.6 |
109.5 |
O1X |
P' |
O2X |
109.6 |
109.5 |
P' |
O2X |
HO2X |
109.5 |
114.0 |
Torsion Angles for HSX
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O4 |
O1 |
244.1 |
240.5 |
O1 |
C1 |
O4 |
H1 |
240.1 |
239.0 |
O4 |
C1 |
O1 |
HO1 |
19.3 |
62.0 |
C2 |
C1 |
O4 |
H1 |
124.2 |
119.5 |
O4 |
C1 |
C2 |
O2 |
161.3 |
120.6 |
O4 |
C1 |
C2 |
H2 |
282.0 |
243.2 |
O4 |
C1 |
O1 |
C2 |
245.1 |
242.1 |
O4 |
C1 |
O1 |
H1 |
120.8 |
121.1 |
C2 |
C1 |
O1 |
H1 |
235.8 |
239.0 |
O1 |
C1 |
C2 |
O2 |
41.2 |
1.2 |
O1 |
C1 |
C2 |
H2 |
161.9 |
123.8 |
O4 |
C1 |
C2 |
O1 |
120.1 |
119.5 |
O4 |
C1 |
C2 |
H1 |
239.6 |
240.4 |
O1 |
C1 |
C2 |
H1 |
119.6 |
121.0 |
C2 |
C1 |
O1 |
HO1 |
134.2 |
180.0 |
C3 |
C2 |
C1 |
H2 |
124.1 |
118.8 |
O2 |
C2 |
C1 |
H2 |
239.3 |
237.4 |
C1 |
C2 |
O2 |
HO2 |
301.8 |
61.6 |
O4 |
C1 |
H1 |
O1 |
237.0 |
239.0 |
O4 |
C1 |
H1 |
C2 |
118.0 |
118.0 |
C2 |
C1 |
H1 |
O1 |
119.0 |
121.0 |
H1 |
C1 |
O1 |
HO1 |
258.5 |
300.9 |
H1 |
C1 |
C2 |
O2 |
281.7 |
240.2 |
H1 |
C1 |
C2 |
H2 |
42.4 |
2.8 |
C4 |
O4 |
C1 |
O1 |
73.9 |
93.0 |
C4 |
O4 |
C1 |
C2 |
318.0 |
333.5 |
C4 |
O4 |
C1 |
H1 |
193.8 |
214.0 |
O4 |
C4 |
C3 |
H3 |
130.8 |
81.2 |
C5 |
C4 |
O4 |
H4 |
241.2 |
237.1 |
C3 |
C2 |
C1 |
O1 |
286.1 |
242.6 |
C3 |
C2 |
C1 |
H1 |
166.5 |
121.6 |
C1 |
C2 |
C3 |
H2 |
233.7 |
241.2 |
O4 |
C4 |
C3 |
C2 |
8.9 |
323.0 |
O2 |
C2 |
C3 |
H2 |
121.2 |
122.6 |
C3 |
C2 |
O2 |
HO2 |
48.1 |
176.3 |
O2 |
C2 |
C1 |
O1 |
41.2 |
1.2 |
O2 |
C2 |
C1 |
H1 |
281.7 |
240.2 |
C1 |
C2 |
O2 |
H2 |
127.7 |
122.6 |
C3 |
C2 |
O2 |
H2 |
233.9 |
237.3 |
H2 |
C2 |
C1 |
O1 |
161.9 |
123.8 |
H2 |
C2 |
C1 |
H1 |
42.4 |
2.8 |
C1 |
C2 |
H2 |
O2 |
238.7 |
237.4 |
H2 |
C2 |
O2 |
HO2 |
174.1 |
298.9 |
HO2 |
O2 |
C2 |
H2 |
174.1 |
298.9 |
O4 |
C4 |
C3 |
H4 |
238.8 |
241.5 |
C4 |
C3 |
C2 |
H2 |
94.4 |
139.6 |
O3 |
C3 |
C4 |
H3 |
120.9 |
123.6 |
C4 |
C3 |
O3 |
HO3 |
345.7 |
174.2 |
O4 |
C4 |
C3 |
O3 |
251.6 |
204.8 |
O3 |
C3 |
C2 |
H2 |
208.2 |
257.8 |
C4 |
C3 |
O3 |
H3 |
235.0 |
236.3 |
H3 |
C3 |
C2 |
H2 |
329.6 |
21.4 |
H3 |
C3 |
O3 |
HO3 |
110.6 |
297.9 |
HO3 |
O3 |
C3 |
H3 |
110.6 |
297.9 |
O4 |
C4 |
C5 |
H4 |
121.2 |
122.9 |
C5 |
C4 |
C3 |
H3 |
10.8 |
322.7 |
O4 |
C4 |
H4 |
C3 |
118.9 |
114.1 |
H4 |
C4 |
C3 |
H3 |
252.0 |
199.7 |
O5 |
C5 |
C4 |
H4 |
305.4 |
303.5 |
H51 |
C5 |
O5 |
H52 |
118.1 |
120.0 |
H51 |
C5 |
C4 |
H4 |
65.4 |
63.5 |
O5 |
C5 |
H51 |
H52 |
237.9 |
240.0 |
H52 |
C5 |
C4 |
H4 |
183.5 |
183.5 |
O5 |
C5 |
H52 |
H51 |
121.3 |
120.0 |
P' |
O5 |
C5 |
H51 |
10.0 |
60.0 |
P' |
O5 |
C5 |
H52 |
252.0 |
300.0 |
O1X |
P' |
O2X |
HO2X |
50.8 |
180.0 |
O3X |
P' |
O2X |
HO2X |
286.4 |
300.0 |
HO1 |
O1 |
C1 |
H1 |
258.5 |
300.9 |