PDB Chemical Component HSA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HSA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CB |
CG |
1.499 |
1.507 |
| CB |
CA |
1.536 |
1.530 |
| CB |
HB1 |
1.115 |
1.089 |
| CB |
HB2 |
1.114 |
1.090 |
| CG |
CD2 |
1.356 |
1.347 |
| CG |
ND1 |
1.379 |
1.340 |
| CD2 |
NE2 |
1.374 |
1.369 |
| CD2 |
HD2 |
1.103 |
1.080 |
| ND1 |
CE1 |
1.321 |
1.305 |
| CE1 |
NE2 |
1.320 |
1.349 |
| CE1 |
HE1 |
1.104 |
1.080 |
| NE2 |
HE2 |
1.021 |
0.970 |
| C |
OP4 |
1.424 |
1.428 |
| C |
CA |
1.523 |
1.529 |
| C |
H41 |
1.115 |
1.090 |
| C |
H42 |
1.115 |
1.090 |
| OP4 |
P |
1.595 |
1.610 |
| P |
OP1 |
1.482 |
1.479 |
| P |
OP2 |
1.588 |
1.610 |
| P |
OP3 |
1.465 |
1.610 |
| OP2 |
HO2 |
0.951 |
0.967 |
| OP3 |
HO3 |
0.951 |
0.967 |
| N |
CA |
1.365 |
1.468 |
| N |
HN1 |
1.020 |
1.009 |
| N |
HN2 |
1.020 |
1.009 |
| CA |
HA |
1.115 |
1.089 |
Bond Angles for HSA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CG |
CB |
CA |
109.2 |
109.5 |
| CG |
CB |
HB1 |
112.2 |
109.5 |
| CG |
CB |
HB2 |
112.3 |
109.5 |
| CB |
CG |
CD2 |
131.2 |
126.0 |
| CB |
CG |
ND1 |
122.8 |
126.0 |
| CA |
CB |
HB1 |
112.3 |
109.5 |
| CA |
CB |
HB2 |
112.3 |
109.4 |
| CB |
CA |
C |
118.7 |
109.5 |
| CB |
CA |
N |
121.3 |
109.5 |
| CB |
CA |
HA |
90.3 |
109.4 |
| HB1 |
CB |
HB2 |
98.2 |
109.5 |
| CD2 |
CG |
ND1 |
106.0 |
108.0 |
| CG |
CD2 |
NE2 |
107.1 |
106.8 |
| CG |
CD2 |
HD2 |
126.0 |
126.6 |
| CG |
ND1 |
CE1 |
109.6 |
109.3 |
| NE2 |
CD2 |
HD2 |
126.9 |
126.6 |
| CD2 |
NE2 |
CE1 |
109.2 |
107.2 |
| CD2 |
NE2 |
HE2 |
127.0 |
126.4 |
| ND1 |
CE1 |
NE2 |
108.2 |
108.7 |
| ND1 |
CE1 |
HE1 |
125.9 |
125.6 |
| NE2 |
CE1 |
HE1 |
125.9 |
125.6 |
| CE1 |
NE2 |
HE2 |
123.8 |
126.4 |
| OP4 |
C |
CA |
119.6 |
109.5 |
| OP4 |
C |
H41 |
108.6 |
109.5 |
| OP4 |
C |
H42 |
108.6 |
109.5 |
| C |
OP4 |
P |
122.6 |
106.8 |
| CA |
C |
H41 |
108.5 |
109.5 |
| CA |
C |
H42 |
108.5 |
109.5 |
| C |
CA |
N |
119.9 |
109.5 |
| C |
CA |
HA |
116.9 |
109.4 |
| H41 |
C |
H42 |
101.5 |
109.4 |
| OP4 |
P |
OP1 |
106.4 |
109.5 |
| OP4 |
P |
OP2 |
100.1 |
109.5 |
| OP4 |
P |
OP3 |
109.8 |
109.4 |
| OP1 |
P |
OP2 |
113.8 |
109.5 |
| OP1 |
P |
OP3 |
117.5 |
109.5 |
| OP2 |
P |
OP3 |
107.8 |
109.4 |
| P |
OP2 |
HO2 |
100.1 |
106.9 |
| P |
OP3 |
HO3 |
109.8 |
106.9 |
| CA |
N |
HN1 |
121.4 |
106.7 |
| CA |
N |
HN2 |
108.0 |
106.7 |
| N |
CA |
HA |
65.7 |
109.5 |
| HN1 |
N |
HN2 |
108.0 |
106.7 |
Torsion Angles for HSA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
CB |
CG |
HB1 |
234.8 |
120.0 |
| CA |
CB |
CG |
HB2 |
125.3 |
240.1 |
| CG |
CB |
CA |
C |
225.4 |
179.9 |
| CG |
CB |
CA |
N |
42.7 |
300.0 |
| CG |
CB |
CA |
HA |
104.2 |
60.0 |
| HB1 |
CB |
CG |
HB2 |
250.5 |
120.0 |
| CD2 |
CG |
CB |
ND1 |
182.6 |
180.4 |
| CB |
CG |
CD2 |
NE2 |
177.5 |
180.0 |
| CB |
CG |
CD2 |
HD2 |
357.5 |
359.9 |
| CB |
CG |
ND1 |
CE1 |
182.3 |
179.9 |
| CG |
CB |
CA |
HB1 |
125.2 |
239.9 |
| CG |
CB |
CA |
HB2 |
234.7 |
120.0 |
| CA |
CB |
CG |
CD2 |
252.1 |
120.1 |
| CA |
CB |
CG |
ND1 |
69.4 |
299.7 |
| HB1 |
CB |
CA |
HB2 |
109.5 |
240.0 |
| OP4 |
C |
CA |
CB |
129.3 |
180.0 |
| CB |
CA |
C |
H41 |
4.1 |
300.1 |
| CB |
CA |
C |
H42 |
254.6 |
60.0 |
| C |
CA |
CB |
N |
182.7 |
239.9 |
| C |
CA |
CB |
HA |
121.3 |
120.0 |
| CB |
CA |
N |
HN1 |
180.0 |
300.0 |
| CB |
CA |
N |
HN2 |
54.7 |
53.7 |
| N |
CA |
CB |
HA |
298.6 |
240.0 |
| CG |
CB |
HB1 |
CA |
236.5 |
120.0 |
| CG |
CB |
HB1 |
HB2 |
118.2 |
240.0 |
| HB1 |
CB |
CG |
CD2 |
17.3 |
0.0 |
| HB1 |
CB |
CG |
ND1 |
194.7 |
179.7 |
| CA |
CB |
HB1 |
HB2 |
241.7 |
120.0 |
| HB1 |
CB |
CA |
C |
100.2 |
300.0 |
| HB1 |
CB |
CA |
N |
277.5 |
60.1 |
| HB1 |
CB |
CA |
HA |
339.0 |
180.0 |
| CG |
CB |
HB2 |
CA |
123.6 |
240.0 |
| CG |
CB |
HB2 |
HB1 |
241.8 |
120.1 |
| HB2 |
CB |
CG |
CD2 |
126.8 |
240.0 |
| HB2 |
CB |
CG |
ND1 |
304.2 |
59.6 |
| CA |
CB |
HB2 |
HB1 |
118.3 |
240.0 |
| HB2 |
CB |
CA |
C |
350.7 |
60.0 |
| HB2 |
CB |
CA |
N |
168.0 |
180.0 |
| HB2 |
CB |
CA |
HA |
229.4 |
300.0 |
| CD2 |
CG |
CB |
CA |
252.1 |
120.1 |
| CD2 |
CG |
CB |
HB1 |
17.3 |
0.0 |
| CD2 |
CG |
CB |
HB2 |
126.8 |
240.0 |
| CB |
CG |
CD2 |
ND1 |
177.7 |
179.7 |
| CD2 |
CG |
ND1 |
CE1 |
0.3 |
359.6 |
| NE2 |
CD2 |
CG |
HD2 |
180.0 |
180.1 |
| CG |
CD2 |
NE2 |
CE1 |
0.0 |
359.9 |
| CG |
CD2 |
NE2 |
HE2 |
180.0 |
180.0 |
| ND1 |
CG |
CB |
CA |
69.4 |
299.7 |
| ND1 |
CG |
CB |
HB1 |
194.7 |
179.7 |
| ND1 |
CG |
CB |
HB2 |
304.2 |
59.6 |
| CB |
CG |
ND1 |
CD2 |
182.1 |
180.3 |
| ND1 |
CG |
CD2 |
NE2 |
359.8 |
0.3 |
| ND1 |
CG |
CD2 |
HD2 |
179.8 |
180.2 |
| CG |
ND1 |
CE1 |
NE2 |
359.8 |
0.4 |
| CG |
ND1 |
CE1 |
HE1 |
179.7 |
180.2 |
| NE2 |
CD2 |
CG |
ND1 |
359.8 |
0.3 |
| CG |
CD2 |
NE2 |
HD2 |
180.0 |
179.9 |
| ND1 |
CE1 |
NE2 |
CD2 |
0.1 |
359.8 |
| CD2 |
NE2 |
CE1 |
HE1 |
180.2 |
180.0 |
| CE1 |
NE2 |
CD2 |
HE2 |
180.0 |
179.9 |
| HD2 |
CD2 |
CG |
ND1 |
179.8 |
180.2 |
| CG |
CD2 |
HD2 |
NE2 |
180.0 |
180.1 |
| HD2 |
CD2 |
NE2 |
CE1 |
180.0 |
180.0 |
| HD2 |
CD2 |
NE2 |
HE2 |
0.0 |
0.1 |
| CD2 |
NE2 |
CE1 |
ND1 |
0.1 |
359.8 |
| NE2 |
CE1 |
ND1 |
HE1 |
180.0 |
180.2 |
| ND1 |
CE1 |
NE2 |
HE2 |
180.1 |
179.7 |
| CE1 |
NE2 |
CD2 |
HD2 |
180.0 |
180.0 |
| CD2 |
NE2 |
CE1 |
HE2 |
180.0 |
180.1 |
| ND1 |
CE1 |
NE2 |
HE1 |
180.0 |
179.8 |
| ND1 |
CE1 |
HE1 |
NE2 |
180.0 |
180.3 |
| HE1 |
CE1 |
NE2 |
HE2 |
0.1 |
359.9 |
| HE2 |
NE2 |
CD2 |
HD2 |
0.0 |
0.1 |
| CD2 |
NE2 |
HE2 |
CE1 |
180.0 |
179.9 |
| HE2 |
NE2 |
CE1 |
HE1 |
0.1 |
359.9 |
| CB |
CA |
C |
OP4 |
129.3 |
180.0 |
| CA |
C |
OP4 |
H41 |
234.8 |
120.1 |
| CA |
C |
OP4 |
H42 |
125.2 |
240.0 |
| OP4 |
C |
CA |
N |
312.0 |
60.0 |
| OP4 |
C |
CA |
HA |
235.8 |
300.0 |
| H41 |
C |
OP4 |
H42 |
250.4 |
119.9 |
| C |
OP4 |
P |
OP1 |
288.1 |
59.9 |
| C |
OP4 |
P |
OP2 |
169.4 |
180.0 |
| C |
OP4 |
P |
OP3 |
56.2 |
299.9 |
| C |
CA |
CB |
HB1 |
100.2 |
300.0 |
| C |
CA |
CB |
HB2 |
350.7 |
60.0 |
| CB |
CA |
C |
N |
177.3 |
120.0 |
| CB |
CA |
C |
HA |
253.5 |
240.0 |
| OP4 |
C |
CA |
H41 |
125.2 |
240.0 |
| OP4 |
C |
CA |
H42 |
234.8 |
120.0 |
| CA |
C |
OP4 |
P |
271.4 |
180.1 |
| H41 |
C |
CA |
H42 |
109.5 |
240.1 |
| C |
CA |
N |
HN1 |
357.3 |
60.0 |
| C |
CA |
N |
HN2 |
232.0 |
173.8 |
| N |
CA |
C |
HA |
76.1 |
120.0 |
| OP4 |
C |
H41 |
CA |
228.5 |
120.1 |
| OP4 |
C |
H41 |
H42 |
114.3 |
240.0 |
| H41 |
C |
OP4 |
P |
36.6 |
60.0 |
| CA |
C |
H41 |
H42 |
245.8 |
120.0 |
| H41 |
C |
CA |
N |
186.8 |
180.0 |
| H41 |
C |
CA |
HA |
110.6 |
60.0 |
| OP4 |
C |
H42 |
CA |
131.5 |
240.0 |
| OP4 |
C |
H42 |
H41 |
245.7 |
120.0 |
| H42 |
C |
OP4 |
P |
146.2 |
300.1 |
| CA |
C |
H42 |
H41 |
114.2 |
240.0 |
| H42 |
C |
CA |
N |
77.2 |
300.0 |
| H42 |
C |
CA |
HA |
1.1 |
180.0 |
| P |
OP4 |
C |
CA |
271.4 |
180.1 |
| P |
OP4 |
C |
H41 |
36.6 |
60.0 |
| P |
OP4 |
C |
H42 |
146.2 |
300.1 |
| OP1 |
P |
OP4 |
OP2 |
118.7 |
239.9 |
| OP1 |
P |
OP4 |
OP3 |
231.9 |
120.0 |
| OP2 |
P |
OP4 |
OP3 |
113.2 |
240.1 |
| OP4 |
P |
OP2 |
HO2 |
180.1 |
179.9 |
| OP4 |
P |
OP3 |
HO3 |
180.0 |
300.1 |
| OP4 |
P |
OP1 |
OP2 |
250.7 |
120.1 |
| OP4 |
P |
OP1 |
OP3 |
123.4 |
240.0 |
| OP2 |
P |
OP1 |
OP3 |
232.7 |
119.9 |
| OP1 |
P |
OP2 |
HO2 |
67.0 |
300.1 |
| OP1 |
P |
OP3 |
HO3 |
301.7 |
180.0 |
| OP4 |
P |
OP2 |
OP1 |
113.1 |
239.9 |
| OP4 |
P |
OP2 |
OP3 |
245.3 |
119.9 |
| OP1 |
P |
OP2 |
OP3 |
132.2 |
240.0 |
| OP2 |
P |
OP3 |
HO3 |
71.8 |
60.0 |
| OP4 |
P |
OP3 |
OP1 |
238.3 |
120.1 |
| OP4 |
P |
OP3 |
OP2 |
108.1 |
240.0 |
| OP1 |
P |
OP3 |
OP2 |
229.8 |
120.0 |
| OP3 |
P |
OP2 |
HO2 |
294.8 |
60.0 |
| HO2 |
OP2 |
P |
OP3 |
294.8 |
60.0 |
| N |
CA |
CB |
HB1 |
277.5 |
60.1 |
| N |
CA |
CB |
HB2 |
168.0 |
180.0 |
| CB |
CA |
N |
C |
182.7 |
239.9 |
| CB |
CA |
N |
HA |
74.5 |
120.0 |
| N |
CA |
C |
H41 |
186.8 |
180.0 |
| N |
CA |
C |
H42 |
77.2 |
300.0 |
| C |
CA |
N |
HA |
251.7 |
240.0 |
| HN1 |
N |
CA |
HN2 |
125.4 |
246.2 |
| CA |
N |
HN1 |
HN2 |
234.6 |
113.8 |
| HN1 |
N |
CA |
HA |
105.6 |
180.0 |
| CA |
N |
HN2 |
HN1 |
133.0 |
246.2 |
| HN2 |
N |
CA |
HA |
340.2 |
293.8 |
| HA |
CA |
CB |
HB1 |
339.0 |
180.0 |
| HA |
CA |
CB |
HB2 |
229.4 |
300.0 |
| CB |
CA |
HA |
C |
122.7 |
120.0 |
| CB |
CA |
HA |
N |
235.4 |
240.0 |
| HA |
CA |
C |
H41 |
110.6 |
60.0 |
| HA |
CA |
C |
H42 |
1.1 |
180.0 |
| C |
CA |
HA |
N |
112.7 |
120.0 |
| HA |
CA |
N |
HN1 |
105.6 |
180.0 |
| HA |
CA |
N |
HN2 |
340.2 |
293.8 |