PDB Chemical Component HRP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HRP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.388 |
1.442 |
N |
H |
1.020 |
1.005 |
N |
H2 |
1.020 |
1.006 |
CA |
CB |
1.437 |
1.549 |
CA |
C |
1.497 |
1.522 |
CA |
HA |
1.115 |
1.096 |
CB |
CG |
1.537 |
1.476 |
CB |
HB2 |
1.115 |
1.108 |
CB |
HB3 |
1.115 |
1.110 |
CG |
CD1 |
1.357 |
1.376 |
CG |
CD2 |
1.457 |
1.424 |
CD1 |
NE1 |
1.372 |
1.369 |
CD1 |
HD1 |
1.103 |
1.081 |
NE1 |
CE2 |
1.344 |
1.377 |
NE1 |
HE1 |
1.020 |
1.010 |
CE2 |
CZ2 |
1.401 |
1.399 |
CE2 |
CD2 |
1.416 |
1.396 |
CZ2 |
CH2 |
1.376 |
1.397 |
CZ2 |
HZ2 |
1.103 |
1.085 |
CH2 |
CZ3 |
1.432 |
1.394 |
CH2 |
HH2 |
1.103 |
1.088 |
CZ3 |
CE3 |
1.400 |
1.399 |
CZ3 |
OX |
1.246 |
1.364 |
CE3 |
CD2 |
1.445 |
1.409 |
CE3 |
HE3 |
1.103 |
1.086 |
C |
O |
1.187 |
1.226 |
C |
OXT |
1.311 |
1.354 |
OX |
HOX |
0.950 |
0.970 |
HXT |
OXT |
0.950 |
0.981 |
Bond Angles for HRP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
109.3 |
119.0 |
CA |
N |
H2 |
117.5 |
118.9 |
N |
CA |
CB |
117.5 |
110.9 |
N |
CA |
C |
106.8 |
111.0 |
N |
CA |
HA |
127.5 |
106.1 |
H |
N |
H2 |
109.4 |
120.6 |
CB |
CA |
C |
131.7 |
111.1 |
CB |
CA |
HA |
71.9 |
110.7 |
CA |
CB |
CG |
105.3 |
114.1 |
CA |
CB |
HB2 |
113.8 |
108.9 |
CA |
CB |
HB3 |
113.8 |
108.6 |
C |
CA |
HA |
96.3 |
107.0 |
CA |
C |
O |
120.2 |
122.9 |
CA |
C |
OXT |
108.0 |
114.8 |
CG |
CB |
HB2 |
113.8 |
109.7 |
CG |
CB |
HB3 |
113.8 |
111.3 |
CB |
CG |
CD1 |
125.6 |
125.8 |
CB |
CG |
CD2 |
129.2 |
126.5 |
HB2 |
CB |
HB3 |
96.7 |
103.8 |
CD1 |
CG |
CD2 |
104.9 |
107.7 |
CG |
CD1 |
NE1 |
110.9 |
108.0 |
CG |
CD1 |
HD1 |
124.1 |
131.6 |
CG |
CD2 |
CE2 |
106.6 |
107.1 |
CG |
CD2 |
CE3 |
135.0 |
134.1 |
NE1 |
CD1 |
HD1 |
125.0 |
120.4 |
CD1 |
NE1 |
CE2 |
109.4 |
110.2 |
CD1 |
NE1 |
HE1 |
126.1 |
125.0 |
CE2 |
NE1 |
HE1 |
124.5 |
124.9 |
NE1 |
CE2 |
CZ2 |
128.6 |
130.3 |
NE1 |
CE2 |
CD2 |
107.5 |
107.1 |
CZ2 |
CE2 |
CD2 |
123.1 |
122.6 |
CE2 |
CZ2 |
CH2 |
117.6 |
117.6 |
CE2 |
CZ2 |
HZ2 |
122.0 |
121.4 |
CE2 |
CD2 |
CE3 |
117.3 |
118.8 |
CH2 |
CZ2 |
HZ2 |
120.4 |
121.0 |
CZ2 |
CH2 |
CZ3 |
121.9 |
121.0 |
CZ2 |
CH2 |
HH2 |
117.0 |
119.1 |
CZ3 |
CH2 |
HH2 |
121.1 |
119.9 |
CH2 |
CZ3 |
CE3 |
119.9 |
120.8 |
CH2 |
CZ3 |
OX |
120.0 |
119.7 |
CE3 |
CZ3 |
OX |
120.1 |
119.5 |
CZ3 |
CE3 |
CD2 |
119.2 |
119.2 |
CZ3 |
CE3 |
HE3 |
118.8 |
120.3 |
CZ3 |
OX |
HOX |
120.0 |
110.2 |
CD2 |
CE3 |
HE3 |
122.0 |
120.6 |
O |
C |
OXT |
128.7 |
122.3 |
Torsion Angles for HRP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
234.7 |
166.7 |
CB |
CA |
N |
C |
160.2 |
123.9 |
CB |
CA |
N |
HA |
272.4 |
239.8 |
N |
CA |
CB |
CG |
57.9 |
177.4 |
N |
CA |
CB |
HB2 |
292.6 |
300.3 |
N |
CA |
CB |
HB3 |
183.1 |
52.7 |
C |
CA |
N |
HA |
112.2 |
115.9 |
N |
CA |
C |
O |
351.7 |
34.7 |
N |
CA |
C |
OXT |
189.7 |
214.3 |
CA |
N |
H |
H2 |
129.9 |
193.6 |
H |
N |
CA |
CB |
54.7 |
71.0 |
H |
N |
CA |
C |
254.5 |
307.1 |
H |
N |
CA |
HA |
142.4 |
191.2 |
CA |
N |
H2 |
H |
234.7 |
166.4 |
H2 |
N |
CA |
CB |
180.0 |
264.4 |
H2 |
N |
CA |
C |
19.9 |
140.4 |
H2 |
N |
CA |
HA |
267.7 |
24.6 |
CB |
CA |
N |
H |
54.7 |
71.0 |
CB |
CA |
N |
H2 |
180.0 |
264.4 |
N |
CA |
CB |
C |
205.8 |
236.1 |
N |
CA |
CB |
HA |
123.5 |
117.5 |
C |
CA |
CB |
HA |
277.8 |
241.4 |
CB |
CA |
C |
O |
195.5 |
270.9 |
CB |
CA |
C |
OXT |
33.5 |
90.5 |
CG |
CB |
CA |
HB2 |
125.3 |
237.1 |
CG |
CB |
CA |
HB3 |
234.7 |
124.8 |
CA |
CB |
CG |
CD1 |
148.0 |
270.0 |
CA |
CB |
CG |
CD2 |
320.2 |
90.0 |
HB2 |
CB |
CA |
HB3 |
109.5 |
247.6 |
C |
CA |
N |
H |
254.5 |
307.1 |
C |
CA |
N |
H2 |
19.9 |
140.4 |
N |
CA |
C |
CB |
156.2 |
123.8 |
N |
CA |
C |
HA |
227.6 |
244.7 |
CB |
CA |
C |
HA |
71.4 |
120.8 |
C |
CA |
CB |
CG |
212.1 |
301.4 |
C |
CA |
CB |
HB2 |
86.8 |
64.3 |
C |
CA |
CB |
HB3 |
337.3 |
176.6 |
O |
C |
CA |
OXT |
162.0 |
180.4 |
HA |
CA |
N |
H |
142.4 |
191.2 |
HA |
CA |
N |
H2 |
267.7 |
24.6 |
N |
CA |
HA |
CB |
248.8 |
239.7 |
N |
CA |
HA |
C |
116.9 |
118.6 |
CB |
CA |
HA |
C |
228.1 |
238.9 |
HA |
CA |
CB |
CG |
294.3 |
60.0 |
HA |
CA |
CB |
HB2 |
169.0 |
182.9 |
HA |
CA |
CB |
HB3 |
59.6 |
295.2 |
HA |
CA |
C |
O |
124.1 |
150.0 |
HA |
CA |
C |
OXT |
322.1 |
329.7 |
CG |
CB |
CA |
C |
212.1 |
301.4 |
CG |
CB |
CA |
HA |
294.3 |
60.0 |
CA |
CB |
CG |
HB2 |
234.7 |
122.4 |
CA |
CB |
CG |
HB3 |
125.3 |
236.7 |
HB2 |
CB |
CG |
HB3 |
250.5 |
114.3 |
CD1 |
CG |
CB |
CD2 |
187.8 |
180.0 |
CB |
CG |
CD1 |
NE1 |
177.4 |
180.0 |
CB |
CG |
CD1 |
HD1 |
357.4 |
0.0 |
CB |
CG |
CD2 |
CE2 |
179.5 |
180.0 |
CB |
CG |
CD2 |
CE3 |
12.6 |
360.0 |
HB2 |
CB |
CA |
C |
86.8 |
64.3 |
HB2 |
CB |
CA |
HA |
169.0 |
182.9 |
CA |
CB |
HB2 |
CG |
120.6 |
234.5 |
CA |
CB |
HB2 |
HB3 |
240.3 |
115.5 |
CG |
CB |
HB2 |
HB3 |
119.7 |
240.9 |
HB2 |
CB |
CG |
CD1 |
273.3 |
147.6 |
HB2 |
CB |
CG |
CD2 |
85.5 |
327.6 |
HB3 |
CB |
CA |
C |
337.3 |
176.6 |
HB3 |
CB |
CA |
HA |
59.6 |
295.2 |
CA |
CB |
HB3 |
CG |
239.4 |
126.4 |
CA |
CB |
HB3 |
HB2 |
119.7 |
244.3 |
CG |
CB |
HB3 |
HB2 |
240.3 |
118.0 |
HB3 |
CB |
CG |
CD1 |
22.7 |
33.3 |
HB3 |
CB |
CG |
CD2 |
194.9 |
213.3 |
CD1 |
CG |
CB |
HB2 |
273.3 |
147.6 |
CD1 |
CG |
CB |
HB3 |
22.7 |
33.3 |
CB |
CG |
CD1 |
CD2 |
173.7 |
180.0 |
CD1 |
CG |
CD2 |
CE2 |
352.9 |
360.0 |
CD1 |
CG |
CD2 |
CE3 |
186.1 |
180.0 |
NE1 |
CD1 |
CG |
HD1 |
180.0 |
179.9 |
CG |
CD1 |
NE1 |
CE2 |
1.3 |
0.0 |
CG |
CD1 |
NE1 |
HE1 |
181.3 |
180.0 |
CD2 |
CG |
CB |
HB2 |
85.5 |
327.6 |
CD2 |
CG |
CB |
HB3 |
194.9 |
213.3 |
CB |
CG |
CD2 |
CD1 |
186.6 |
180.0 |
CD2 |
CG |
CD1 |
NE1 |
3.7 |
360.0 |
CD2 |
CG |
CD1 |
HD1 |
183.7 |
180.1 |
NE1 |
CE2 |
CD2 |
CG |
8.0 |
0.1 |
CZ2 |
CE2 |
CD2 |
CG |
179.1 |
179.9 |
CE2 |
CD2 |
CG |
CE3 |
166.9 |
180.0 |
CZ3 |
CE3 |
CD2 |
CG |
174.7 |
180.0 |
CG |
CD2 |
CE3 |
HE3 |
354.7 |
0.0 |
NE1 |
CD1 |
CG |
CD2 |
3.7 |
360.0 |
CG |
CD1 |
NE1 |
HD1 |
180.0 |
180.0 |
CE2 |
NE1 |
CD1 |
HE1 |
180.0 |
180.0 |
CD1 |
NE1 |
CE2 |
CZ2 |
183.6 |
180.1 |
CD1 |
NE1 |
CE2 |
CD2 |
354.1 |
359.9 |
HD1 |
CD1 |
CG |
CD2 |
183.7 |
180.1 |
CG |
CD1 |
HD1 |
NE1 |
180.0 |
179.9 |
HD1 |
CD1 |
NE1 |
CE2 |
181.3 |
180.0 |
HD1 |
CD1 |
NE1 |
HE1 |
1.3 |
360.0 |
CG |
CD2 |
CE2 |
NE1 |
8.0 |
0.1 |
CE2 |
NE1 |
CD1 |
HD1 |
181.3 |
180.0 |
CD1 |
NE1 |
CE2 |
HE1 |
180.0 |
180.0 |
CZ2 |
CE2 |
NE1 |
CD2 |
189.5 |
180.1 |
NE1 |
CE2 |
CZ2 |
CH2 |
178.9 |
179.9 |
NE1 |
CE2 |
CZ2 |
HZ2 |
358.8 |
359.8 |
NE1 |
CE2 |
CD2 |
CE3 |
177.6 |
180.0 |
HE1 |
NE1 |
CD1 |
HD1 |
1.3 |
360.0 |
CD1 |
NE1 |
HE1 |
CE2 |
180.0 |
180.0 |
HE1 |
NE1 |
CE2 |
CZ2 |
3.6 |
0.1 |
HE1 |
NE1 |
CE2 |
CD2 |
174.1 |
179.9 |
CG |
CD2 |
CE2 |
CZ2 |
179.1 |
179.9 |
CZ2 |
CE2 |
NE1 |
HE1 |
3.6 |
0.1 |
NE1 |
CE2 |
CZ2 |
CD2 |
169.2 |
179.9 |
CZ2 |
CE2 |
CD2 |
CE3 |
348.7 |
359.9 |
CH2 |
CZ2 |
CE2 |
HZ2 |
180.0 |
180.1 |
CE2 |
CZ2 |
CH2 |
CZ3 |
354.3 |
359.9 |
CE2 |
CZ2 |
CH2 |
HH2 |
174.3 |
179.9 |
CG |
CD2 |
CE2 |
CE3 |
190.4 |
180.0 |
CD2 |
CE2 |
NE1 |
HE1 |
174.1 |
179.9 |
NE1 |
CE2 |
CD2 |
CZ2 |
188.9 |
180.1 |
CD2 |
CE2 |
CZ2 |
CH2 |
9.7 |
0.1 |
CD2 |
CE2 |
CZ2 |
HZ2 |
189.7 |
179.9 |
CZ3 |
CE3 |
CD2 |
CE2 |
8.9 |
0.1 |
CE2 |
CD2 |
CE3 |
HE3 |
188.9 |
180.0 |
CH2 |
CZ2 |
CE2 |
CD2 |
9.7 |
0.1 |
CE2 |
CZ2 |
CH2 |
HZ2 |
180.0 |
179.9 |
CZ3 |
CH2 |
CZ2 |
HH2 |
180.0 |
180.0 |
CZ2 |
CH2 |
CZ3 |
CE3 |
3.8 |
0.1 |
CZ2 |
CH2 |
CZ3 |
OX |
181.5 |
180.0 |
HZ2 |
CZ2 |
CE2 |
CD2 |
189.7 |
179.9 |
CE2 |
CZ2 |
HZ2 |
CH2 |
180.0 |
180.1 |
HZ2 |
CZ2 |
CH2 |
CZ3 |
174.3 |
180.0 |
HZ2 |
CZ2 |
CH2 |
HH2 |
354.4 |
0.1 |
CZ3 |
CH2 |
CZ2 |
HZ2 |
174.3 |
180.0 |
CZ2 |
CH2 |
CZ3 |
HH2 |
180.0 |
180.0 |
CE3 |
CZ3 |
CH2 |
OX |
182.4 |
180.1 |
CH2 |
CZ3 |
CE3 |
CD2 |
354.6 |
359.9 |
CH2 |
CZ3 |
CE3 |
HE3 |
174.6 |
180.0 |
CH2 |
CZ3 |
OX |
HOX |
180.0 |
222.8 |
HH2 |
CH2 |
CZ2 |
HZ2 |
354.4 |
0.1 |
CZ2 |
CH2 |
HH2 |
CZ3 |
180.0 |
180.0 |
HH2 |
CH2 |
CZ3 |
CE3 |
183.8 |
180.1 |
HH2 |
CH2 |
CZ3 |
OX |
1.4 |
359.9 |
CG |
CD2 |
CE3 |
CZ3 |
174.7 |
180.0 |
CE2 |
CD2 |
CE3 |
CZ3 |
8.9 |
0.1 |
CE3 |
CZ3 |
CH2 |
HH2 |
183.8 |
180.1 |
CH2 |
CZ3 |
CE3 |
OX |
177.6 |
179.9 |
CE3 |
CZ3 |
OX |
HOX |
357.6 |
42.7 |
CD2 |
CE3 |
CZ3 |
HE3 |
180.0 |
180.0 |
OX |
CZ3 |
CH2 |
HH2 |
1.4 |
359.9 |
CH2 |
CZ3 |
OX |
CE3 |
182.4 |
180.1 |
OX |
CZ3 |
CE3 |
CD2 |
177.0 |
180.1 |
OX |
CZ3 |
CE3 |
HE3 |
357.0 |
0.1 |
CG |
CD2 |
CE3 |
CE2 |
165.8 |
180.0 |
CD2 |
CE3 |
CZ3 |
OX |
177.0 |
180.1 |
CZ3 |
CE3 |
CD2 |
HE3 |
180.0 |
180.0 |
HE3 |
CE3 |
CZ3 |
OX |
357.0 |
0.1 |
CZ3 |
CE3 |
HE3 |
CD2 |
180.0 |
180.0 |
O |
C |
CA |
HA |
124.1 |
150.0 |
CA |
C |
O |
OXT |
202.2 |
179.6 |
OXT |
C |
CA |
HA |
322.1 |
329.7 |
CA |
C |
OXT |
O |
159.9 |
180.4 |