PDB Chemical Component HRG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HRG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.332 |
1.469 |
| N |
H |
1.021 |
1.009 |
| N |
H2 |
1.020 |
1.009 |
| CA |
CB |
1.527 |
1.530 |
| CA |
C |
1.547 |
1.507 |
| CA |
HA |
1.115 |
1.090 |
| CB |
CG' |
1.515 |
1.529 |
| CB |
HB1 |
1.114 |
1.090 |
| CB |
HB2 |
1.115 |
1.090 |
| CG |
CG' |
1.505 |
1.531 |
| CG |
CD |
1.524 |
1.530 |
| CG |
HG1 |
1.115 |
1.090 |
| CG |
HG2 |
1.115 |
1.090 |
| CG' |
HG'1 |
1.115 |
1.090 |
| CG' |
HG'2 |
1.115 |
1.090 |
| CD |
NE |
1.350 |
1.466 |
| CD |
HD1 |
1.115 |
1.091 |
| CD |
HD2 |
1.115 |
1.089 |
| NE |
CZ |
1.344 |
1.374 |
| NE |
HNE |
1.020 |
0.970 |
| CZ |
NH1 |
1.335 |
1.303 |
| CZ |
NH2 |
1.324 |
1.375 |
| NH1 |
HN1 |
1.021 |
0.970 |
| NH2 |
HN21 |
1.019 |
0.970 |
| NH2 |
HN22 |
1.020 |
0.969 |
| C |
O |
1.257 |
1.208 |
| C |
OXT |
1.239 |
1.342 |
| OXT |
HXT |
0.949 |
0.967 |
Bond Angles for HRG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
110.2 |
106.7 |
| CA |
N |
H2 |
112.0 |
106.7 |
| N |
CA |
CB |
110.1 |
109.5 |
| N |
CA |
C |
110.3 |
109.4 |
| N |
CA |
HA |
108.9 |
109.4 |
| H |
N |
H2 |
111.8 |
106.7 |
| CB |
CA |
C |
110.8 |
109.5 |
| CB |
CA |
HA |
108.4 |
109.5 |
| CA |
CB |
CG' |
111.5 |
109.5 |
| CA |
CB |
HB1 |
111.5 |
109.5 |
| CA |
CB |
HB2 |
111.5 |
109.5 |
| C |
CA |
HA |
108.2 |
109.5 |
| CA |
C |
O |
119.5 |
120.1 |
| CA |
C |
OXT |
118.3 |
120.0 |
| CG' |
CB |
HB1 |
111.5 |
109.5 |
| CG' |
CB |
HB2 |
111.5 |
109.5 |
| CB |
CG' |
CG |
112.7 |
109.5 |
| CB |
CG' |
HG'1 |
111.1 |
109.5 |
| CB |
CG' |
HG'2 |
111.0 |
109.5 |
| HB1 |
CB |
HB2 |
99.0 |
109.4 |
| CG' |
CG |
CD |
120.7 |
109.4 |
| CG' |
CG |
HG1 |
108.2 |
109.4 |
| CG' |
CG |
HG2 |
108.2 |
109.4 |
| CG |
CG' |
HG'1 |
111.0 |
109.5 |
| CG |
CG' |
HG'2 |
111.0 |
109.4 |
| CD |
CG |
HG1 |
108.2 |
109.5 |
| CD |
CG |
HG2 |
108.2 |
109.5 |
| CG |
CD |
NE |
110.5 |
109.4 |
| CG |
CD |
HD1 |
111.8 |
109.5 |
| CG |
CD |
HD2 |
111.8 |
109.5 |
| HG1 |
CG |
HG2 |
101.7 |
109.5 |
| HG'1 |
CG' |
HG'2 |
99.3 |
109.4 |
| NE |
CD |
HD1 |
111.8 |
109.4 |
| NE |
CD |
HD2 |
111.8 |
109.5 |
| CD |
NE |
CZ |
126.2 |
120.0 |
| CD |
NE |
HNE |
106.3 |
120.0 |
| HD1 |
CD |
HD2 |
98.6 |
109.5 |
| CZ |
NE |
HNE |
106.3 |
120.0 |
| NE |
CZ |
NH1 |
121.5 |
120.0 |
| NE |
CZ |
NH2 |
119.0 |
120.0 |
| NH1 |
CZ |
NH2 |
119.5 |
120.0 |
| CZ |
NH1 |
HN1 |
42.5 |
120.0 |
| CZ |
NH2 |
HN21 |
118.9 |
120.0 |
| CZ |
NH2 |
HN22 |
108.8 |
120.0 |
| HN21 |
NH2 |
HN22 |
108.8 |
120.0 |
| O |
C |
OXT |
122.2 |
120.0 |
| C |
OXT |
HXT |
118.3 |
120.0 |
Torsion Angles for HRG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.1 |
246.2 |
| CB |
CA |
N |
C |
237.3 |
240.0 |
| CB |
CA |
N |
HA |
118.7 |
120.0 |
| N |
CA |
CB |
CG' |
278.8 |
295.0 |
| N |
CA |
CB |
HB1 |
44.0 |
55.0 |
| N |
CA |
CB |
HB2 |
153.6 |
175.0 |
| C |
CA |
N |
HA |
241.4 |
240.0 |
| N |
CA |
C |
O |
179.5 |
340.0 |
| N |
CA |
C |
OXT |
359.5 |
160.0 |
| CA |
N |
H |
H2 |
234.8 |
113.8 |
| H |
N |
CA |
CB |
179.9 |
186.2 |
| H |
N |
CA |
C |
302.6 |
306.2 |
| H |
N |
CA |
HA |
61.2 |
66.2 |
| CA |
N |
H2 |
H |
124.2 |
246.2 |
| H2 |
N |
CA |
CB |
54.8 |
300.0 |
| H2 |
N |
CA |
C |
177.5 |
60.0 |
| H2 |
N |
CA |
HA |
296.1 |
180.0 |
| CB |
CA |
N |
H |
179.9 |
186.2 |
| CB |
CA |
N |
H2 |
54.8 |
300.0 |
| N |
CA |
CB |
C |
122.3 |
120.0 |
| N |
CA |
CB |
HA |
240.9 |
240.0 |
| C |
CA |
CB |
HA |
118.6 |
120.1 |
| CB |
CA |
C |
O |
301.8 |
100.0 |
| CB |
CA |
C |
OXT |
121.8 |
280.0 |
| CG' |
CB |
CA |
HB1 |
234.7 |
239.9 |
| CG' |
CB |
CA |
HB2 |
125.2 |
120.0 |
| CA |
CB |
CG' |
CG |
106.1 |
180.0 |
| CA |
CB |
CG' |
HG'1 |
231.4 |
300.0 |
| CA |
CB |
CG' |
HG'2 |
340.9 |
60.0 |
| HB1 |
CB |
CA |
HB2 |
250.5 |
240.1 |
| C |
CA |
N |
H |
302.6 |
306.2 |
| C |
CA |
N |
H2 |
177.5 |
60.0 |
| N |
CA |
C |
CB |
237.8 |
240.0 |
| N |
CA |
C |
HA |
119.1 |
119.9 |
| CB |
CA |
C |
HA |
241.3 |
239.9 |
| C |
CA |
CB |
CG' |
156.5 |
175.0 |
| C |
CA |
CB |
HB1 |
281.7 |
295.1 |
| C |
CA |
CB |
HB2 |
31.2 |
55.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| HA |
CA |
N |
H |
61.2 |
66.2 |
| HA |
CA |
N |
H2 |
296.1 |
180.0 |
| N |
CA |
HA |
CB |
119.8 |
120.0 |
| N |
CA |
HA |
C |
240.1 |
240.1 |
| CB |
CA |
HA |
C |
120.3 |
120.1 |
| HA |
CA |
CB |
CG' |
37.8 |
55.0 |
| HA |
CA |
CB |
HB1 |
163.1 |
175.0 |
| HA |
CA |
CB |
HB2 |
272.6 |
295.0 |
| HA |
CA |
C |
O |
60.5 |
220.1 |
| HA |
CA |
C |
OXT |
240.5 |
40.1 |
| CG' |
CB |
CA |
C |
156.5 |
175.0 |
| CG' |
CB |
CA |
HA |
37.8 |
55.0 |
| CA |
CB |
CG' |
HB1 |
125.3 |
120.0 |
| CA |
CB |
CG' |
HB2 |
234.8 |
240.0 |
| HB1 |
CB |
CG' |
HB2 |
109.5 |
120.0 |
| CB |
CG' |
CG |
CD |
77.9 |
180.0 |
| CB |
CG' |
CG |
HG1 |
203.2 |
300.0 |
| CB |
CG' |
CG |
HG2 |
312.6 |
60.0 |
| CG |
CG' |
CB |
HG'1 |
234.7 |
240.0 |
| CG |
CG' |
CB |
HG'2 |
125.2 |
120.0 |
| HG'1 |
CG' |
CB |
HG'2 |
250.5 |
240.0 |
| HB1 |
CB |
CA |
C |
281.7 |
295.1 |
| HB1 |
CB |
CA |
HA |
163.1 |
175.0 |
| CA |
CB |
HB1 |
CG' |
234.8 |
240.0 |
| CA |
CB |
HB1 |
HB2 |
117.4 |
120.0 |
| CG' |
CB |
HB1 |
HB2 |
242.6 |
240.0 |
| HB1 |
CB |
CG' |
CG |
340.8 |
60.0 |
| HB1 |
CB |
CG' |
HG'1 |
106.1 |
180.0 |
| HB1 |
CB |
CG' |
HG'2 |
215.6 |
300.0 |
| HB2 |
CB |
CA |
C |
31.2 |
55.0 |
| HB2 |
CB |
CA |
HA |
272.6 |
295.0 |
| CA |
CB |
HB2 |
CG' |
125.2 |
120.0 |
| CA |
CB |
HB2 |
HB1 |
242.6 |
240.0 |
| CG' |
CB |
HB2 |
HB1 |
117.4 |
120.0 |
| HB2 |
CB |
CG' |
CG |
231.3 |
300.0 |
| HB2 |
CB |
CG' |
HG'1 |
356.6 |
60.0 |
| HB2 |
CB |
CG' |
HG'2 |
106.1 |
180.0 |
| CG |
CG' |
CB |
HB1 |
340.8 |
60.0 |
| CG |
CG' |
CB |
HB2 |
231.3 |
300.0 |
| CB |
CG' |
CG |
HG'1 |
125.3 |
120.0 |
| CB |
CG' |
CG |
HG'2 |
234.8 |
240.0 |
| CD |
CG |
CG' |
HG1 |
234.7 |
240.0 |
| CD |
CG |
CG' |
HG2 |
125.3 |
120.0 |
| CG' |
CG |
CD |
NE |
278.0 |
180.1 |
| CG' |
CG |
CD |
HD1 |
43.3 |
299.9 |
| CG' |
CG |
CD |
HD2 |
152.8 |
60.0 |
| HG1 |
CG |
CG' |
HG2 |
250.6 |
240.0 |
| HG'1 |
CG' |
CG |
HG'2 |
109.4 |
119.9 |
| CG' |
CG |
CD |
HG1 |
125.3 |
119.9 |
| CG' |
CG |
CD |
HG2 |
234.7 |
240.1 |
| CD |
CG |
CG' |
HG'1 |
312.6 |
60.0 |
| CD |
CG |
CG' |
HG'2 |
203.2 |
300.1 |
| HG1 |
CG |
CD |
HG2 |
109.5 |
120.1 |
| NE |
CD |
CG |
HD1 |
234.7 |
240.1 |
| NE |
CD |
CG |
HD2 |
125.2 |
120.1 |
| CG |
CD |
NE |
CZ |
160.6 |
180.0 |
| CG |
CD |
NE |
HNE |
35.3 |
359.9 |
| HD1 |
CD |
CG |
HD2 |
250.5 |
239.9 |
| CG' |
CG |
HG1 |
CD |
227.6 |
240.1 |
| CG' |
CG |
HG1 |
HG2 |
113.8 |
119.9 |
| HG1 |
CG |
CG' |
HG'1 |
77.9 |
180.0 |
| HG1 |
CG |
CG' |
HG'2 |
328.5 |
60.0 |
| CD |
CG |
HG1 |
HG2 |
246.2 |
239.9 |
| HG1 |
CG |
CD |
NE |
152.8 |
60.1 |
| HG1 |
CG |
CD |
HD1 |
278.0 |
180.0 |
| HG1 |
CG |
CD |
HD2 |
27.5 |
300.1 |
| CG' |
CG |
HG2 |
CD |
132.4 |
120.0 |
| CG' |
CG |
HG2 |
HG1 |
246.2 |
240.0 |
| HG2 |
CG |
CG' |
HG'1 |
187.3 |
300.0 |
| HG2 |
CG |
CG' |
HG'2 |
77.9 |
180.1 |
| CD |
CG |
HG2 |
HG1 |
113.9 |
120.1 |
| HG2 |
CG |
CD |
NE |
43.3 |
300.0 |
| HG2 |
CG |
CD |
HD1 |
168.6 |
59.9 |
| HG2 |
CG |
CD |
HD2 |
278.1 |
179.9 |
| HG'1 |
CG' |
CB |
HB1 |
106.1 |
180.0 |
| HG'1 |
CG' |
CB |
HB2 |
356.6 |
60.0 |
| CB |
CG' |
HG'1 |
CG |
233.8 |
240.0 |
| CB |
CG' |
HG'1 |
HG'2 |
116.9 |
120.1 |
| HG'1 |
CG' |
CG |
CD |
312.6 |
60.0 |
| HG'1 |
CG' |
CG |
HG1 |
77.9 |
180.0 |
| HG'1 |
CG' |
CG |
HG2 |
187.3 |
300.0 |
| CG |
CG' |
HG'1 |
HG'2 |
243.1 |
240.1 |
| HG'2 |
CG' |
CB |
HB1 |
215.6 |
300.0 |
| HG'2 |
CG' |
CB |
HB2 |
106.1 |
180.0 |
| CB |
CG' |
HG'2 |
CG |
126.2 |
120.0 |
| CB |
CG' |
HG'2 |
HG'1 |
243.0 |
239.9 |
| HG'2 |
CG' |
CG |
CD |
203.2 |
300.1 |
| HG'2 |
CG' |
CG |
HG1 |
328.5 |
60.0 |
| HG'2 |
CG' |
CG |
HG2 |
77.9 |
180.1 |
| CG |
CG' |
HG'2 |
HG'1 |
116.9 |
119.9 |
| NE |
CD |
CG |
HG1 |
152.8 |
60.1 |
| NE |
CD |
CG |
HG2 |
43.3 |
300.0 |
| CG |
CD |
NE |
HD1 |
125.3 |
119.9 |
| CG |
CD |
NE |
HD2 |
234.8 |
240.0 |
| HD1 |
CD |
NE |
HD2 |
109.5 |
120.0 |
| CZ |
NE |
CD |
HNE |
125.3 |
180.1 |
| CD |
NE |
CZ |
NH1 |
0.2 |
179.9 |
| CD |
NE |
CZ |
NH2 |
179.9 |
359.9 |
| HD1 |
CD |
CG |
HG1 |
278.0 |
180.0 |
| HD1 |
CD |
CG |
HG2 |
168.6 |
59.9 |
| CG |
CD |
HD1 |
NE |
235.5 |
240.1 |
| CG |
CD |
HD1 |
HD2 |
117.7 |
120.1 |
| NE |
CD |
HD1 |
HD2 |
242.2 |
240.0 |
| HD1 |
CD |
NE |
CZ |
35.3 |
60.1 |
| HD1 |
CD |
NE |
HNE |
270.0 |
239.9 |
| HD2 |
CD |
CG |
HG1 |
27.5 |
300.1 |
| HD2 |
CD |
CG |
HG2 |
278.1 |
179.9 |
| CG |
CD |
HD2 |
NE |
124.5 |
120.0 |
| CG |
CD |
HD2 |
HD1 |
242.3 |
240.0 |
| NE |
CD |
HD2 |
HD1 |
117.8 |
119.9 |
| HD2 |
CD |
NE |
CZ |
285.8 |
300.1 |
| HD2 |
CD |
NE |
HNE |
160.5 |
119.9 |
| CZ |
NE |
CD |
HD1 |
35.3 |
60.1 |
| CZ |
NE |
CD |
HD2 |
285.8 |
300.1 |
| CD |
NE |
CZ |
HNE |
234.7 |
179.9 |
| NH1 |
CZ |
NE |
NH2 |
180.3 |
180.0 |
| NE |
CZ |
NH1 |
HN1 |
37.3 |
179.9 |
| NE |
CZ |
NH2 |
HN21 |
180.0 |
180.0 |
| NE |
CZ |
NH2 |
HN22 |
305.3 |
0.0 |
| HNE |
NE |
CD |
HD1 |
270.0 |
239.9 |
| HNE |
NE |
CD |
HD2 |
160.5 |
119.9 |
| CD |
NE |
HNE |
CZ |
136.7 |
180.1 |
| HNE |
NE |
CZ |
NH1 |
125.5 |
0.1 |
| HNE |
NE |
CZ |
NH2 |
305.2 |
180.0 |
| NH1 |
CZ |
NE |
HNE |
125.5 |
0.1 |
| NE |
CZ |
NH1 |
NH2 |
179.7 |
180.0 |
| NH1 |
CZ |
NH2 |
HN21 |
359.8 |
0.0 |
| NH1 |
CZ |
NH2 |
HN22 |
125.0 |
180.0 |
| NH2 |
CZ |
NE |
HNE |
305.2 |
180.0 |
| NE |
CZ |
NH2 |
NH1 |
180.3 |
180.0 |
| NH2 |
CZ |
NH1 |
HN1 |
217.6 |
359.9 |
| HN21 |
NH2 |
CZ |
HN22 |
234.8 |
180.0 |
| HN1 |
NH1 |
CZ |
NH2 |
217.6 |
359.9 |
| CZ |
NH2 |
HN21 |
HN22 |
125.2 |
180.0 |
| CZ |
NH2 |
HN22 |
HN21 |
229.1 |
180.0 |
| O |
C |
CA |
HA |
60.5 |
220.1 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
0.1 |
| OXT |
C |
CA |
HA |
240.5 |
40.1 |
| CA |
C |
OXT |
O |
180.0 |
180.0 |