PDB Chemical Component HPS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HPS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.464 |
1.383 |
C1 |
C6 |
1.373 |
1.381 |
C1 |
H1 |
1.103 |
1.080 |
C2 |
C3 |
1.353 |
1.381 |
C2 |
H2 |
1.103 |
1.079 |
C3 |
C4 |
1.390 |
1.381 |
C3 |
H3 |
1.103 |
1.080 |
C4 |
C5 |
1.435 |
1.387 |
C4 |
H4 |
1.103 |
1.081 |
C5 |
C6 |
1.415 |
1.386 |
C5 |
O12 |
1.422 |
1.359 |
C6 |
H6 |
1.103 |
1.080 |
O12 |
P13 |
1.717 |
1.610 |
P13 |
O14 |
1.545 |
1.609 |
P13 |
O15 |
1.594 |
1.609 |
P13 |
O16 |
1.558 |
1.480 |
O14 |
H14 |
0.949 |
0.966 |
O15 |
H15 |
0.949 |
0.966 |
Bond Angles for HPS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
124.1 |
120.1 |
C2 |
C1 |
H1 |
121.4 |
120.0 |
C1 |
C2 |
C3 |
122.1 |
120.1 |
C1 |
C2 |
H2 |
123.1 |
119.9 |
C6 |
C1 |
H1 |
114.5 |
120.0 |
C1 |
C6 |
C5 |
112.6 |
120.0 |
C1 |
C6 |
H6 |
122.4 |
120.0 |
C3 |
C2 |
H2 |
114.8 |
120.0 |
C2 |
C3 |
C4 |
115.3 |
120.1 |
C2 |
C3 |
H3 |
121.1 |
120.0 |
C4 |
C3 |
H3 |
123.6 |
119.9 |
C3 |
C4 |
C5 |
122.6 |
119.9 |
C3 |
C4 |
H4 |
117.0 |
120.1 |
C5 |
C4 |
H4 |
120.4 |
120.0 |
C4 |
C5 |
C6 |
122.7 |
119.9 |
C4 |
C5 |
O12 |
115.7 |
120.0 |
C6 |
C5 |
O12 |
121.6 |
120.1 |
C5 |
C6 |
H6 |
125.0 |
120.0 |
C5 |
O12 |
P13 |
127.6 |
106.8 |
O12 |
P13 |
O14 |
112.4 |
109.5 |
O12 |
P13 |
O15 |
105.4 |
109.5 |
O12 |
P13 |
O16 |
105.0 |
109.4 |
O14 |
P13 |
O15 |
112.4 |
109.5 |
O14 |
P13 |
O16 |
112.0 |
109.5 |
P13 |
O14 |
H14 |
112.4 |
106.9 |
O15 |
P13 |
O16 |
109.2 |
109.5 |
P13 |
O15 |
H15 |
105.5 |
106.8 |
Torsion Angles for HPS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H1 |
180.1 |
179.8 |
C2 |
C1 |
C6 |
C5 |
355.3 |
0.5 |
C2 |
C1 |
C6 |
H6 |
175.3 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
2.9 |
359.9 |
C1 |
C2 |
C3 |
H3 |
182.9 |
180.0 |
C2 |
C1 |
C6 |
H1 |
179.9 |
180.2 |
C6 |
C1 |
C2 |
C3 |
358.5 |
359.8 |
C6 |
C1 |
C2 |
H2 |
178.5 |
179.8 |
C4 |
C5 |
C6 |
C1 |
9.5 |
359.5 |
C1 |
C6 |
C5 |
O12 |
191.8 |
179.8 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.5 |
C2 |
C1 |
H1 |
C6 |
180.1 |
179.9 |
H1 |
C1 |
C2 |
C3 |
178.4 |
179.9 |
H1 |
C1 |
C2 |
H2 |
358.5 |
359.9 |
H1 |
C1 |
C6 |
C5 |
175.4 |
180.3 |
H1 |
C1 |
C6 |
H6 |
355.4 |
359.8 |
C3 |
C2 |
C1 |
C6 |
358.5 |
359.8 |
C3 |
C2 |
C1 |
H1 |
178.4 |
179.9 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
C5 |
2.0 |
0.1 |
C2 |
C3 |
C4 |
H4 |
182.0 |
180.0 |
H2 |
C2 |
C1 |
C6 |
178.5 |
179.8 |
H2 |
C2 |
C1 |
H1 |
358.5 |
359.9 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
182.9 |
179.9 |
H2 |
C2 |
C3 |
H3 |
2.9 |
0.1 |
C4 |
C3 |
C2 |
H2 |
182.9 |
179.9 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
C6 |
351.2 |
0.2 |
C3 |
C4 |
C5 |
O12 |
169.0 |
179.9 |
H3 |
C3 |
C2 |
H2 |
2.9 |
0.1 |
C2 |
C3 |
H3 |
C4 |
180.0 |
179.9 |
H3 |
C3 |
C4 |
C5 |
182.0 |
180.0 |
H3 |
C3 |
C4 |
H4 |
2.0 |
359.9 |
C1 |
C6 |
C5 |
C4 |
9.5 |
359.5 |
C5 |
C4 |
C3 |
H3 |
182.0 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
O12 |
182.1 |
180.3 |
C4 |
C5 |
C6 |
H6 |
189.5 |
180.1 |
C4 |
C5 |
O12 |
P13 |
277.3 |
90.0 |
H4 |
C4 |
C3 |
H3 |
2.0 |
359.9 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.1 |
H4 |
C4 |
C5 |
C6 |
171.2 |
180.3 |
H4 |
C4 |
C5 |
O12 |
349.0 |
360.0 |
C5 |
C6 |
C1 |
H1 |
175.4 |
180.3 |
C1 |
C6 |
C5 |
H6 |
179.9 |
179.5 |
C6 |
C5 |
C4 |
H4 |
171.2 |
180.3 |
C4 |
C5 |
C6 |
O12 |
177.7 |
179.7 |
C6 |
C5 |
O12 |
P13 |
95.2 |
269.8 |
O12 |
C5 |
C4 |
H4 |
349.0 |
360.0 |
C4 |
C5 |
O12 |
C6 |
182.1 |
180.3 |
O12 |
C5 |
C6 |
H6 |
11.8 |
0.3 |
C5 |
O12 |
P13 |
O14 |
185.3 |
180.0 |
C5 |
O12 |
P13 |
O15 |
62.5 |
59.9 |
C5 |
O12 |
P13 |
O16 |
307.3 |
300.0 |
H6 |
C6 |
C1 |
H1 |
355.4 |
359.8 |
C1 |
C6 |
H6 |
C5 |
180.1 |
180.5 |
H6 |
C6 |
C5 |
O12 |
11.8 |
0.3 |
O14 |
P13 |
O12 |
O15 |
122.8 |
120.1 |
O14 |
P13 |
O12 |
O16 |
238.1 |
240.0 |
O12 |
P13 |
O14 |
H14 |
180.0 |
179.9 |
O15 |
P13 |
O12 |
O16 |
115.2 |
119.9 |
O12 |
P13 |
O15 |
H15 |
180.0 |
60.1 |
O12 |
P13 |
O14 |
O15 |
241.2 |
239.9 |
O12 |
P13 |
O14 |
O16 |
117.9 |
120.0 |
O15 |
P13 |
O14 |
O16 |
236.7 |
240.0 |
O14 |
P13 |
O15 |
H15 |
57.2 |
300.0 |
O12 |
P13 |
O15 |
O14 |
122.8 |
120.1 |
O12 |
P13 |
O15 |
O16 |
247.7 |
240.1 |
O14 |
P13 |
O15 |
O16 |
124.9 |
120.0 |
O15 |
P13 |
O14 |
H14 |
298.8 |
300.0 |
O12 |
P13 |
O16 |
O14 |
237.8 |
239.9 |
O12 |
P13 |
O16 |
O15 |
112.6 |
120.0 |
O14 |
P13 |
O16 |
O15 |
234.9 |
240.0 |
O16 |
P13 |
O14 |
H14 |
62.1 |
60.0 |
O16 |
P13 |
O15 |
H15 |
292.4 |
180.0 |
H14 |
O14 |
P13 |
O15 |
298.8 |
300.0 |
H14 |
O14 |
P13 |
O16 |
62.1 |
60.0 |
H15 |
O15 |
P13 |
O16 |
292.4 |
180.0 |