PDB Chemical Component HPP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HPP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.393 1.382
C1 C6 1.393 1.383
C1 C7 1.505 1.506
C2 C3 1.386 1.382
C2 H2 1.104 1.080
C3 C4 1.380 1.387
C3 H3 1.103 1.080
C4 O4 1.381 1.358
C4 C5 1.382 1.386
O4 HO4 0.950 0.967
C5 C6 1.382 1.381
C5 H5 1.103 1.081
C6 H6 1.103 1.080
C7 C8 1.520 1.529
C7 H71 1.115 1.088
C7 H72 1.115 1.090
C8 C9 1.521 1.507
C8 H81 1.114 1.088
C8 H82 1.116 1.090
C9 O1 1.254 1.208
C9 O2 1.247 1.342
O2 HO2 0.950 0.967

Bond Angles for HPP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 118.0 120.1
C2 C1 C7 121.3 119.9
C1 C2 C3 121.3 120.0
C1 C2 H2 119.6 120.0
C6 C1 C7 120.7 120.0
C1 C6 C5 121.1 120.0
C1 C6 H6 119.8 120.0
C1 C7 C8 119.2 109.4
C1 C7 H71 108.7 109.5
C1 C7 H72 108.7 109.4
C3 C2 H2 119.0 120.0
C2 C3 C4 119.3 120.0
C2 C3 H3 120.6 120.0
C4 C3 H3 120.2 120.1
C3 C4 O4 121.0 120.1
C3 C4 C5 120.6 119.8
O4 C4 C5 118.3 120.1
C4 O4 HO4 121.0 106.8
C4 C5 C6 119.7 120.0
C4 C5 H5 120.2 120.0
C6 C5 H5 120.2 120.0
C5 C6 H6 119.0 120.0
C8 C7 H71 108.7 109.6
C8 C7 H72 108.7 109.4
C7 C8 C9 112.9 109.5
C7 C8 H81 111.0 109.6
C7 C8 H82 110.9 109.4
H71 C7 H72 101.3 109.5
C9 C8 H81 110.9 109.5
C9 C8 H82 111.0 109.4
C8 C9 O1 116.9 120.0
C8 C9 O2 120.5 120.0
H81 C8 H82 99.4 109.5
O1 C9 O2 122.6 120.0
C9 O2 HO2 120.6 120.0

Torsion Angles for HPP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 180.1 180.4
C2 C1 C6 C5 359.6 359.5
C2 C1 C6 H6 179.6 179.9
C2 C1 C7 C8 89.3 90.1
C2 C1 C7 H71 214.6 330.0
C2 C1 C7 H72 324.0 210.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 359.8 360.0
C1 C2 C3 H3 179.9 179.9
C2 C1 C6 C7 179.9 179.6
C6 C1 C2 C3 0.3 0.3
C6 C1 C2 H2 180.3 180.3
C6 C1 C7 C8 269.2 269.8
C6 C1 C7 H71 34.5 149.6
C6 C1 C7 H72 143.9 29.6
C4 C5 C6 C1 0.4 0.4
C1 C6 C5 H5 180.4 180.3
C5 C6 C1 H6 180.1 179.6
C2 C1 C7 C6 180.1 180.4
C7 C1 C2 C3 180.1 180.0
C7 C1 C2 H2 0.2 359.9
C7 C1 C6 C5 179.7 179.8
C7 C1 C6 H6 359.7 0.3
C8 C7 C1 H71 234.7 120.1
C8 C7 C1 H72 125.3 240.1
C1 C7 C8 C9 304.5 180.0
C1 C7 C8 H81 69.8 59.9
C1 C7 C8 H82 179.3 299.9
H71 C7 C1 H72 250.6 120.0
C3 C2 C1 C6 0.3 0.3
C3 C2 C1 C7 180.1 180.0
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 O4 179.7 180.0
C2 C3 C4 C5 0.2 359.9
H2 C2 C1 C6 180.3 180.3
H2 C2 C1 C7 0.2 359.9
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 179.8 180.0
H2 C2 C3 H3 359.8 360.0
C4 C3 C2 H2 179.8 180.0
C2 C3 C4 H3 180.0 180.0
O4 C4 C3 C5 179.5 180.0
C3 C4 O4 HO4 180.0 89.9
C3 C4 C5 C6 359.7 359.8
C3 C4 C5 H5 179.7 180.0
H3 C3 C2 H2 359.8 360.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 O4 359.7 0.0
H3 C3 C4 C5 180.2 180.0
O4 C4 C3 H3 359.7 0.0
C3 C4 O4 C5 180.4 180.0
O4 C4 C5 C6 180.1 179.8
O4 C4 C5 H5 0.1 359.9
C1 C6 C5 C4 0.4 0.4
C5 C4 C3 H3 180.2 180.0
C3 C4 C5 O4 179.6 180.0
C5 C4 O4 HO4 359.5 270.0
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 H6 180.5 180.0
HO4 O4 C4 C5 359.5 270.0
C5 C6 C1 C7 179.7 179.8
C1 C6 C5 H6 179.9 180.4
C4 C5 C6 H5 180.0 180.1
C4 C5 H5 C6 180.0 179.9
H5 C5 C6 H6 0.4 359.9
H6 C6 C1 C7 359.7 0.3
C1 C6 H6 C5 180.0 179.6
H6 C6 C5 H5 0.4 359.9
C1 C7 C8 H71 125.3 239.9
C1 C7 C8 H72 234.7 119.9
H71 C7 C8 H72 109.4 240.0
C9 C8 C7 H81 234.7 120.1
C9 C8 C7 H82 125.2 240.1
C7 C8 C9 O1 98.3 360.0
C7 C8 C9 O2 278.8 179.9
H81 C8 C7 H82 250.5 120.0
C1 C7 H71 C8 228.8 120.0
C1 C7 H71 H72 114.4 240.0
C8 C7 H71 H72 245.6 120.0
H71 C7 C8 C9 179.2 300.1
H71 C7 C8 H81 304.5 180.0
H71 C7 C8 H82 54.0 60.0
C1 C7 H72 C8 131.2 240.1
C1 C7 H72 H71 245.6 120.0
C8 C7 H72 H71 114.4 239.9
H72 C7 C8 C9 69.8 60.1
H72 C7 C8 H81 195.1 300.0
H72 C7 C8 H82 304.6 180.0
C9 C8 C7 H71 179.2 300.1
C9 C8 C7 H72 69.8 60.1
C7 C8 C9 H81 125.3 239.9
C7 C8 C9 H82 234.8 119.9
H81 C8 C9 H82 109.5 240.0
O1 C9 C8 O2 179.5 180.1
C8 C9 O2 HO2 180.0 180.0
H81 C8 C7 H71 304.5 180.0
H81 C8 C7 H72 195.1 300.0
C7 C8 H81 C9 233.7 120.1
C7 C8 H81 H82 116.8 240.0
C9 C8 H81 H82 243.1 119.9
H81 C8 C9 O1 333.0 120.1
H81 C8 C9 O2 153.5 300.0
H82 C8 C7 H71 54.0 60.0
H82 C8 C7 H72 304.6 180.0
C7 C8 H82 C9 126.3 240.1
C7 C8 H82 H81 243.1 120.1
C9 C8 H82 H81 116.8 240.0
H82 C8 C9 O1 223.4 240.1
H82 C8 C9 O2 44.0 60.0
O1 C9 C8 H81 333.0 120.1
O1 C9 C8 H82 223.4 240.1
C8 C9 O1 O2 180.6 179.9
O1 C9 O2 HO2 0.6 359.9
O2 C9 C8 H81 153.5 300.0
O2 C9 C8 H82 44.0 60.0
C8 C9 O2 O1 179.4 180.1