PDB Chemical Component HPL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HPL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.517 1.530
C1 C6 1.532 1.530
C1 H11 1.115 1.090
C1 H12 1.115 1.090
C2 C3 1.515 1.528
C2 H21 1.115 1.090
C2 H22 1.115 1.090
C3 C4 1.510 1.530
C3 H31 1.115 1.090
C3 H32 1.115 1.090
C4 C5 1.526 1.528
C4 H41 1.115 1.090
C4 H42 1.115 1.090
C5 C12 1.498 1.529
C5 H51 1.115 1.090
C5 H52 1.116 1.090
C6 H61 1.115 1.089
C6 H62 1.115 1.090
C6 H63 1.115 1.090
C12 N13 1.453 1.464
C12 H121 1.115 1.090
C12 H122 1.115 1.090
N13 C14 1.325 1.348
N13 H13 1.020 0.971
C14 O16 1.228 1.212
C14 H14 1.103 1.080

Bond Angles for HPL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 111.3 109.5
C2 C1 H11 111.6 109.4
C2 C1 H12 111.5 109.4
C1 C2 C3 110.6 109.5
C1 C2 H21 111.8 109.5
C1 C2 H22 111.8 109.5
C6 C1 H11 111.5 109.5
C6 C1 H12 111.5 109.5
C1 C6 H61 111.5 109.5
C1 C6 H62 111.3 109.4
C1 C6 H63 111.5 109.4
H11 C1 H12 98.9 109.5
C3 C2 H21 111.8 109.5
C3 C2 H22 111.8 109.5
C2 C3 C4 110.7 109.6
C2 C3 H31 111.8 109.5
C2 C3 H32 111.7 109.5
H21 C2 H22 98.6 109.4
C4 C3 H31 111.7 109.4
C4 C3 H32 111.7 109.4
C3 C4 C5 112.3 109.6
C3 C4 H41 111.2 109.4
C3 C4 H42 111.2 109.4
H31 C3 H32 98.7 109.4
C5 C4 H41 111.2 109.5
C5 C4 H42 111.2 109.5
C4 C5 C12 113.6 109.5
C4 C5 H51 110.7 109.5
C4 C5 H52 110.7 109.5
H41 C4 H42 99.2 109.4
C12 C5 H51 110.7 109.4
C12 C5 H52 110.7 109.4
C5 C12 N13 111.1 109.6
C5 C12 H121 111.6 109.4
C5 C12 H122 111.6 109.4
H51 C5 H52 99.6 109.4
H61 C6 H62 111.5 109.5
H61 C6 H63 98.9 109.5
H62 C6 H63 111.5 109.4
N13 C12 H121 111.6 109.5
N13 C12 H122 111.6 109.5
C12 N13 C14 126.2 120.1
C12 N13 H13 122.1 120.0
H121 C12 H122 98.8 109.4
C14 N13 H13 111.7 119.9
N13 C14 O16 123.8 120.0
N13 C14 H14 122.2 120.0
O16 C14 H14 114.0 120.0

Torsion Angles for HPL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H11 125.2 120.0
C6 C1 C2 H12 234.7 240.0
C2 C1 C6 H61 54.7 180.0
C2 C1 C6 H62 180.0 300.0
C2 C1 C6 H63 305.2 60.0
H11 C1 C2 H12 109.5 120.0
C3 C2 C1 H21 125.2 240.0
C3 C2 C1 H22 234.7 120.0
C1 C2 C3 C4 138.2 180.0
C1 C2 C3 H31 12.9 300.0
C1 C2 C3 H32 263.4 60.0
H21 C2 C1 H22 109.5 240.1
C2 C1 C6 H11 234.7 240.0
C2 C1 C6 H12 125.2 120.0
C6 C1 C2 C3 316.9 180.0
C6 C1 C2 H21 191.6 300.0
C6 C1 C2 H22 82.1 60.0
H11 C1 C6 H12 250.5 239.9
H61 C6 C1 H62 234.8 240.0
H61 C6 C1 H63 109.5 120.0
H62 C6 C1 H63 234.7 240.1
C2 C1 H11 C6 125.1 120.0
C2 C1 H11 H12 242.6 240.0
H11 C1 C2 C3 191.6 60.0
H11 C1 C2 H21 66.4 180.0
H11 C1 C2 H22 316.9 300.0
C6 C1 H11 H12 117.5 120.0
H11 C1 C6 H61 180.0 300.0
H11 C1 C6 H62 305.2 60.0
H11 C1 C6 H63 70.5 179.9
C2 C1 H12 C6 234.9 240.0
C2 C1 H12 H11 117.5 120.0
H12 C1 C2 C3 82.1 300.0
H12 C1 C2 H21 316.9 60.0
H12 C1 C2 H22 207.4 180.0
C6 C1 H12 H11 242.6 240.0
H12 C1 C6 H61 289.5 60.0
H12 C1 C6 H62 54.7 180.1
H12 C1 C6 H63 180.0 300.0
C3 C2 C1 C6 316.9 180.0
C3 C2 C1 H11 191.6 60.0
C3 C2 C1 H12 82.1 300.0
C1 C2 C3 H21 234.7 120.0
C1 C2 C3 H22 125.2 240.0
H21 C2 C3 H22 250.5 120.0
C4 C3 C2 H31 125.3 240.0
C4 C3 C2 H32 234.8 120.0
C2 C3 C4 C5 180.5 180.0
C2 C3 C4 H41 55.3 300.0
C2 C3 C4 H42 305.8 60.0
H31 C3 C2 H32 109.5 240.0
H21 C2 C1 C6 191.6 300.0
H21 C2 C1 H11 66.4 180.0
H21 C2 C1 H12 316.9 60.0
C1 C2 H21 C3 124.6 239.9
C1 C2 H21 H22 242.3 119.9
C3 C2 H21 H22 117.7 240.0
H21 C2 C3 C4 263.4 60.0
H21 C2 C3 H31 138.2 180.0
H21 C2 C3 H32 28.7 300.0
H22 C2 C1 C6 82.1 60.0
H22 C2 C1 H11 316.9 300.0
H22 C2 C1 H12 207.4 180.0
C1 C2 H22 C3 235.4 120.1
C1 C2 H22 H21 117.7 240.1
C3 C2 H22 H21 242.3 120.0
H22 C2 C3 C4 12.9 300.0
H22 C2 C3 H31 247.7 60.0
H22 C2 C3 H32 138.2 180.0
C4 C3 C2 H21 263.4 60.0
C4 C3 C2 H22 12.9 300.0
C2 C3 C4 H31 234.7 120.0
C2 C3 C4 H32 125.2 240.0
H31 C3 C4 H32 250.5 119.9
C5 C4 C3 H41 125.3 240.0
C5 C4 C3 H42 234.7 120.0
C3 C4 C5 C12 29.6 180.0
C3 C4 C5 H51 264.3 300.0
C3 C4 C5 H52 154.9 60.0
H41 C4 C3 H42 109.5 240.1
H31 C3 C2 H21 138.2 180.0
H31 C3 C2 H22 247.7 60.0
C2 C3 H31 C4 124.7 239.9
C2 C3 H31 H32 242.4 120.0
C4 C3 H31 H32 117.7 240.1
H31 C3 C4 C5 305.8 60.0
H31 C3 C4 H41 180.5 180.0
H31 C3 C4 H42 71.1 299.9
H32 C3 C2 H21 28.7 300.0
H32 C3 C2 H22 138.2 180.0
C2 C3 H32 C4 235.3 120.1
C2 C3 H32 H31 117.7 240.0
C4 C3 H32 H31 242.3 119.9
H32 C3 C4 C5 55.3 300.0
H32 C3 C4 H41 290.0 60.1
H32 C3 C4 H42 180.6 180.0
C5 C4 C3 H31 305.8 60.0
C5 C4 C3 H32 55.3 300.0
C3 C4 C5 H41 234.7 120.0
C3 C4 C5 H42 125.3 240.0
H41 C4 C5 H42 250.5 120.0
C12 C5 C4 H51 125.3 240.0
C12 C5 C4 H52 234.7 120.0
C4 C5 C12 N13 127.5 180.0
C4 C5 C12 H121 2.2 300.0
C4 C5 C12 H122 252.7 60.0
H51 C5 C4 H52 109.4 240.0
H41 C4 C3 H31 180.5 180.0
H41 C4 C3 H32 290.0 60.1
C3 C4 H41 C5 125.9 239.9
C3 C4 H41 H42 242.9 119.9
C5 C4 H41 H42 117.1 240.0
H41 C4 C5 C12 154.9 60.0
H41 C4 C5 H51 29.6 180.0
H41 C4 C5 H52 280.2 300.0
H42 C4 C3 H31 71.1 299.9
H42 C4 C3 H32 180.6 180.0
C3 C4 H42 C5 234.1 120.1
C3 C4 H42 H41 117.1 240.1
C5 C4 H42 H41 242.9 120.0
H42 C4 C5 C12 264.4 300.0
H42 C4 C5 H51 139.1 60.0
H42 C4 C5 H52 29.6 180.0
C12 C5 C4 H41 154.9 60.0
C12 C5 C4 H42 264.4 300.0
C4 C5 C12 H51 234.7 120.0
C4 C5 C12 H52 125.3 240.0
H51 C5 C12 H52 250.5 119.9
N13 C12 C5 H121 125.3 240.0
N13 C12 C5 H122 234.7 120.0
C5 C12 N13 C14 121.0 180.0
C5 C12 N13 H13 301.0 -0.0
H121 C12 C5 H122 109.5 240.1
H51 C5 C4 H41 29.6 180.0
H51 C5 C4 H42 139.1 60.0
C4 C5 H51 C12 126.9 239.9
C4 C5 H51 H52 243.5 120.0
C12 C5 H51 H52 116.6 240.1
H51 C5 C12 N13 252.8 60.0
H51 C5 C12 H121 127.5 180.0
H51 C5 C12 H122 18.0 299.9
H52 C5 C4 H41 280.2 300.0
H52 C5 C4 H42 29.6 180.0
C4 C5 H52 C12 233.1 120.1
C4 C5 H52 H51 116.5 240.0
C12 C5 H52 H51 243.4 119.9
H52 C5 C12 N13 2.2 300.0
H52 C5 C12 H121 237.0 60.1
H52 C5 C12 H122 127.5 180.0
H61 C6 C1 H11 180.0 300.0
H61 C6 C1 H12 289.5 60.0
C1 C6 H61 H62 125.1 120.0
C1 C6 H61 H63 242.5 240.0
H62 C6 H61 H63 117.5 120.0
H62 C6 C1 H11 305.2 60.0
H62 C6 C1 H12 54.7 180.1
C1 C6 H62 H61 234.8 239.9
C1 C6 H62 H63 125.3 119.9
H61 C6 H62 H63 250.5 240.0
H63 C6 C1 H11 70.5 179.9
H63 C6 C1 H12 180.0 300.0
C1 C6 H63 H61 117.4 120.1
C1 C6 H63 H62 234.9 240.1
H61 C6 H63 H62 117.5 120.0
N13 C12 C5 H51 252.8 60.0
N13 C12 C5 H52 2.2 300.0
C5 C12 N13 H121 234.7 120.0
C5 C12 N13 H122 125.2 240.0
H121 C12 N13 H122 250.5 120.0
C14 N13 C12 H13 180.0 180.0
C12 N13 C14 O16 358.8 -0.0
C12 N13 C14 H14 178.8 180.0
H121 C12 C5 H51 127.5 180.0
H121 C12 C5 H52 237.0 60.1
C5 C12 H121 N13 125.0 239.9
C5 C12 H121 H122 242.5 119.9
N13 C12 H121 H122 117.5 240.0
H121 C12 N13 C14 246.2 60.0
H121 C12 N13 H13 66.2 240.0
H122 C12 C5 H51 18.0 299.9
H122 C12 C5 H52 127.5 180.0
C5 C12 H122 N13 235.1 120.1
C5 C12 H122 H121 117.5 240.1
N13 C12 H122 H121 242.5 120.0
H122 C12 N13 C14 355.7 300.0
H122 C12 N13 H13 175.7 120.0
C14 N13 C12 H121 246.2 60.0
C14 N13 C12 H122 355.7 300.0
C12 N13 C14 H13 180.0 180.0
O16 C14 N13 H14 180.0 180.0
H13 N13 C12 H121 66.2 240.0
H13 N13 C12 H122 175.7 120.0
C12 N13 H13 C14 180.0 180.0
H13 N13 C14 O16 178.8 180.0
H13 N13 C14 H14 358.8 360.0
O16 C14 N13 H13 178.8 180.0
N13 C14 O16 H14 180.0 180.0
H14 C14 N13 H13 358.8 360.0
N13 C14 H14 O16 180.0 180.0