PDB Chemical Component HPA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HPA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.370 |
1.357 |
N1 |
C6 |
1.413 |
1.352 |
N1 |
HN1 |
1.019 |
0.970 |
C2 |
N3 |
1.338 |
1.302 |
C2 |
H2 |
1.104 |
1.080 |
N3 |
C4 |
1.388 |
1.348 |
C4 |
C5 |
1.372 |
1.396 |
C4 |
N9 |
1.396 |
1.343 |
C5 |
C6 |
1.406 |
1.407 |
C5 |
N7 |
1.362 |
1.378 |
C6 |
O6 |
1.245 |
1.220 |
N7 |
C8 |
1.367 |
1.350 |
N7 |
HN7 |
1.019 |
0.970 |
C8 |
N9 |
1.374 |
1.306 |
C8 |
H8 |
1.103 |
1.079 |
Bond Angles for HPA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
126.6 |
120.3 |
C2 |
N1 |
HN1 |
114.9 |
119.8 |
N1 |
C2 |
N3 |
121.8 |
122.3 |
N1 |
C2 |
H2 |
120.3 |
118.9 |
C6 |
N1 |
HN1 |
118.5 |
119.9 |
N1 |
C6 |
C5 |
111.4 |
118.3 |
N1 |
C6 |
O6 |
122.1 |
120.8 |
N3 |
C2 |
H2 |
117.9 |
118.8 |
C2 |
N3 |
C4 |
112.9 |
121.1 |
N3 |
C4 |
C5 |
127.7 |
119.2 |
N3 |
C4 |
N9 |
125.3 |
133.9 |
C5 |
C4 |
N9 |
106.9 |
106.9 |
C4 |
C5 |
C6 |
119.6 |
118.9 |
C4 |
C5 |
N7 |
110.6 |
106.3 |
C4 |
N9 |
C8 |
106.0 |
109.8 |
C6 |
C5 |
N7 |
129.9 |
134.8 |
C5 |
C6 |
O6 |
126.5 |
120.9 |
C5 |
N7 |
C8 |
105.6 |
107.1 |
C5 |
N7 |
HN7 |
127.1 |
126.5 |
C8 |
N7 |
HN7 |
127.3 |
126.4 |
N7 |
C8 |
N9 |
110.9 |
109.9 |
N7 |
C8 |
H8 |
124.4 |
125.0 |
N9 |
C8 |
H8 |
124.7 |
125.1 |
Torsion Angles for HPA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
C2 |
N1 |
C6 |
C5 |
0.2 |
0.2 |
C2 |
N1 |
C6 |
O6 |
180.8 |
180.1 |
N3 |
C2 |
N1 |
H2 |
180.0 |
180.0 |
N1 |
C2 |
N3 |
C4 |
0.2 |
-0.0 |
C2 |
N1 |
C6 |
HN1 |
180.0 |
180.0 |
C6 |
N1 |
C2 |
N3 |
359.8 |
-0.0 |
C6 |
N1 |
C2 |
H2 |
179.7 |
180.0 |
C4 |
C5 |
C6 |
N1 |
359.9 |
359.5 |
N1 |
C6 |
C5 |
N7 |
179.5 |
180.4 |
C5 |
C6 |
N1 |
O6 |
179.4 |
180.2 |
C2 |
N1 |
HN1 |
C6 |
180.0 |
180.0 |
HN1 |
N1 |
C2 |
N3 |
179.8 |
180.0 |
HN1 |
N1 |
C2 |
H2 |
359.7 |
360.0 |
HN1 |
N1 |
C6 |
C5 |
180.1 |
180.2 |
HN1 |
N1 |
C6 |
O6 |
0.8 |
0.1 |
N3 |
C2 |
N1 |
C6 |
359.8 |
-0.0 |
N3 |
C2 |
N1 |
HN1 |
179.8 |
180.0 |
N1 |
C2 |
N3 |
H2 |
180.0 |
180.0 |
C2 |
N3 |
C4 |
C5 |
359.9 |
359.8 |
C2 |
N3 |
C4 |
N9 |
179.9 |
180.0 |
H2 |
C2 |
N1 |
C6 |
179.7 |
180.0 |
H2 |
C2 |
N1 |
HN1 |
359.7 |
360.0 |
N1 |
C2 |
H2 |
N3 |
180.0 |
180.0 |
H2 |
C2 |
N3 |
C4 |
180.2 |
180.0 |
C4 |
N3 |
C2 |
H2 |
180.2 |
180.0 |
C5 |
C4 |
N3 |
N9 |
180.0 |
179.8 |
N3 |
C4 |
C5 |
C6 |
0.1 |
0.5 |
N3 |
C4 |
C5 |
N7 |
180.4 |
179.8 |
N3 |
C4 |
N9 |
C8 |
179.5 |
180.0 |
N1 |
C6 |
C5 |
C4 |
359.9 |
359.5 |
N3 |
C4 |
C5 |
N9 |
180.0 |
180.2 |
C5 |
C4 |
N9 |
C8 |
359.5 |
0.2 |
C6 |
C5 |
C4 |
N7 |
179.6 |
180.6 |
C4 |
C5 |
C6 |
O6 |
179.2 |
179.7 |
C4 |
C5 |
N7 |
C8 |
359.8 |
0.3 |
C4 |
C5 |
N7 |
HN7 |
179.8 |
180.1 |
N3 |
C4 |
N9 |
C5 |
180.0 |
179.8 |
N9 |
C4 |
C5 |
C6 |
180.1 |
180.3 |
N9 |
C4 |
C5 |
N7 |
0.5 |
359.7 |
N7 |
C8 |
N9 |
C4 |
0.3 |
360.0 |
C4 |
N9 |
C8 |
H8 |
180.3 |
179.9 |
C5 |
C6 |
N1 |
HN1 |
180.1 |
180.2 |
N1 |
C6 |
C5 |
O6 |
180.7 |
179.8 |
C6 |
C5 |
C4 |
N9 |
180.1 |
180.3 |
C4 |
C5 |
C6 |
N7 |
180.5 |
179.2 |
C6 |
C5 |
N7 |
C8 |
180.2 |
179.6 |
C6 |
C5 |
N7 |
HN7 |
0.2 |
359.4 |
N7 |
C5 |
C4 |
N9 |
0.5 |
359.7 |
C4 |
C5 |
N7 |
C6 |
179.6 |
180.8 |
N7 |
C5 |
C6 |
O6 |
358.8 |
0.6 |
C8 |
N7 |
C5 |
HN7 |
180.0 |
180.2 |
C5 |
N7 |
C8 |
N9 |
359.9 |
359.8 |
C5 |
N7 |
C8 |
H8 |
179.9 |
179.8 |
O6 |
C6 |
N1 |
HN1 |
0.8 |
0.1 |
N1 |
C6 |
O6 |
C5 |
179.3 |
180.2 |
O6 |
C6 |
C5 |
N7 |
358.8 |
0.6 |
C4 |
N9 |
C8 |
N7 |
0.3 |
360.0 |
C5 |
N7 |
C8 |
HN7 |
180.0 |
179.8 |
N9 |
C8 |
N7 |
H8 |
180.0 |
179.9 |
C5 |
N7 |
HN7 |
C8 |
180.0 |
180.3 |
HN7 |
N7 |
C8 |
N9 |
179.9 |
180.0 |
HN7 |
N7 |
C8 |
H8 |
359.9 |
0.1 |
N9 |
C8 |
N7 |
HN7 |
179.9 |
180.0 |
N7 |
C8 |
N9 |
H8 |
180.0 |
180.1 |
H8 |
C8 |
N7 |
HN7 |
359.9 |
0.1 |
N7 |
C8 |
H8 |
N9 |
180.0 |
179.9 |