PDB Chemical Component HNT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HNT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.530	1.530
C1	C8A	1.530	1.508
C1	H11	1.100	1.090
C1	H12	1.099	1.090
C2	C22	1.530	1.531
C2	N41	1.471	1.470
C2	H2	1.100	1.089
O2	N1	1.421	1.217
C4	C4A	1.531	1.506
C4	N41	1.473	1.463
C4	H41A	1.100	1.090
C4	H42	1.100	1.090
C5	C6	1.390	1.380
C5	C4A	1.394	1.386
C5	H5	1.080	1.080
C6	C7	1.392	1.383
C6	N1	1.333	1.481
C7	C8	1.392	1.381
C7	H7	1.080	1.080
C8	C8A	1.390	1.385
C8	H8	1.080	1.080
O22	C22	1.429	1.429
O22	H22	0.950	0.967
C22	H221	1.100	1.089
C22	H222	1.100	1.090
C8A	C4A	1.392	1.379
N1	O3	1.421	1.219
N41	H41	1.000	1.009

Bond Angles for HNT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C8A	108.3	109.5
C2	C1	H11	110.1	109.5
C2	C1	H12	109.8	109.5
C1	C2	C22	110.6	109.6
C1	C2	N41	110.2	108.8
C1	C2	H2	109.0	109.6
C8A	C1	H11	110.1	109.5
C8A	C1	H12	109.9	109.5
C1	C8A	C8	118.4	119.0
C1	C8A	C4A	121.8	121.0
H11	C1	H12	108.6	109.5
C22	C2	N41	111.7	109.6
C22	C2	H2	107.4	109.6
C2	C22	O22	109.4	109.4
C2	C22	H221	109.5	109.5
C2	C22	H222	109.5	109.5
N41	C2	H2	107.8	109.6
C2	N41	C4	111.9	106.7
C2	N41	H41	108.7	106.8
O2	N1	C6	120.7	120.0
O2	N1	O3	119.1	120.0
C4A	C4	N41	110.7	110.9
C4A	C4	H41A	108.8	109.2
C4A	C4	H42	109.0	109.2
C4	C4A	C5	118.2	118.8
C4	C4A	C8A	122.2	121.5
N41	C4	H41A	108.8	109.1
N41	C4	H42	109.1	109.2
C4	N41	H41	108.7	106.8
H41A	C4	H42	110.5	109.2
C6	C5	C4A	120.8	120.3
C6	C5	H5	119.6	119.9
C5	C6	C7	119.3	120.0
C5	C6	N1	120.5	120.0
C4A	C5	H5	119.6	119.8
C5	C4A	C8A	119.6	119.7
C7	C6	N1	120.1	120.0
C6	C7	C8	120.2	119.8
C6	C7	H7	119.9	120.1
C6	N1	O3	120.3	120.0
C8	C7	H7	119.9	120.1
C7	C8	C8A	120.3	120.2
C7	C8	H8	119.8	119.9
C8A	C8	H8	119.9	119.9
C8	C8A	C4A	119.8	120.0
C22	O22	H22	109.5	106.8
O22	C22	H221	109.5	109.5
O22	C22	H222	109.5	109.5
H221	C22	H222	109.5	109.5

Torsion Angles for HNT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C8A	C1	C2	H11	239.5	240.0
C8A	C1	C2	H12	120.0	120.0
C2	C1	C8A	C8	159.9	164.5
C2	C1	C8A	C4A	340.1	344.6
H11	C1	C2	H12	240.5	240.0
C22	C2	C1	N41	124.0	119.9
C22	C2	C1	H2	242.1	239.7
C1	C2	C22	O22	163.6	175.3
C1	C2	C22	H221	43.6	55.3
C1	C2	C22	H222	283.6	295.3
N41	C2	C1	H2	118.1	119.9
C1	C2	N41	C4	290.0	285.7
C1	C2	N41	H41	50.0	171.7
C2	C1	C8A	H11	120.5	120.0
C2	C1	C8A	H12	240.0	240.0
C8A	C1	C2	C22	176.7	171.6
C8A	C1	C2	N41	52.7	51.8
C8A	C1	C2	H2	294.6	291.9
H11	C1	C8A	H12	119.6	120.0
C4	C4A	C8A	C1	0.6	0.2
C5	C4A	C8A	C1	180.0	180.1
C7	C8	C8A	C1	180.1	179.9
C1	C8A	C8	H8	0.0	359.9
C8	C8A	C1	C4A	179.8	180.0
C2	C1	H11	C8A	240.6	240.0
C2	C1	H11	H12	120.3	120.0
H11	C1	C2	C22	297.2	291.6
H11	C1	C2	N41	173.2	171.8
H11	C1	C2	H2	55.1	51.9
C8A	C1	H11	H12	239.7	240.0
H11	C1	C8A	C8	39.5	44.6
H11	C1	C8A	C4A	219.6	224.6
C2	C1	H12	C8A	119.0	120.0
C2	C1	H12	H11	239.5	240.0
H12	C1	C2	C22	56.7	51.6
H12	C1	C2	N41	292.7	291.8
H12	C1	C2	H2	174.6	171.9
C8A	C1	H12	H11	120.5	120.0
H12	C1	C8A	C8	279.9	284.5
H12	C1	C8A	C4A	100.1	104.6
C22	C2	C1	C8A	176.7	171.6
C22	C2	C1	H11	297.2	291.6
C22	C2	C1	H12	56.7	51.6
C1	C2	C22	N41	236.9	240.6
C1	C2	C22	H2	118.8	120.3
N41	C2	C22	H2	242.0	239.7
C22	C2	N41	C4	166.7	165.8
C22	C2	N41	H41	286.6	51.9
C2	C22	O22	H22	136.3	180.0
O22	C22	C2	H221	120.0	120.0
O22	C22	C2	H222	240.0	240.0
H221	C22	C2	H222	120.0	120.0
N41	C2	C1	C8A	52.7	51.8
N41	C2	C1	H11	173.2	171.8
N41	C2	C1	H12	292.7	291.8
C1	C2	N41	C22	123.4	119.8
C1	C2	N41	H2	241.2	240.1
C22	C2	N41	H2	117.8	120.3
N41	C2	C22	O22	286.7	294.7
N41	C2	C22	H221	166.7	174.7
N41	C2	C22	H222	46.7	54.7
C4A	C4	N41	C2	46.8	56.2
C2	N41	C4	H41A	287.3	295.8
C2	N41	C4	H42	166.7	176.6
C4	N41	C2	H41	240.0	113.9
H2	C2	C1	C8A	294.6	291.9
H2	C2	C1	H11	55.1	51.9
H2	C2	C1	H12	174.6	171.9
C1	C2	H2	C22	240.1	239.7
C1	C2	H2	N41	119.6	119.4
C22	C2	H2	N41	239.5	239.7
H2	C2	C22	O22	44.8	55.0
H2	C2	C22	H221	284.8	295.0
H2	C2	C22	H222	164.8	175.0
H2	C2	N41	C4	48.9	45.5
H2	C2	N41	H41	168.8	291.6
C5	C6	N1	O2	3.5	180.0
C7	C6	N1	O2	180.4	360.0
C6	N1	O2	O3	179.9	180.0
C1	C8A	C4A	C4	0.6	0.2
C2	N41	C4	C4A	46.8	56.2
N41	C4	C4A	H41A	240.5	239.7
N41	C4	C4A	H42	120.0	120.4
C4A	C4	N41	H41	286.8	170.2
H41A	C4	C4A	H42	239.5	240.7
C6	C5	C4A	C4	179.4	179.8
C4	C4A	C5	H5	359.4	359.8
C5	C4A	C4	C8A	180.6	180.1
C8	C8A	C4A	C4	180.8	180.2
C4	N41	C2	H2	48.9	45.5
C2	N41	C4	H41	120.0	246.0
C4A	C4	N41	H41A	119.5	120.4
C4A	C4	N41	H42	240.0	239.6
N41	C4	C4A	C5	167.6	159.4
N41	C4	C4A	C8A	347.0	339.4
H41A	C4	N41	H42	120.5	119.2
C4A	C4	H41A	N41	239.3	238.6
C4A	C4	H41A	H42	119.6	119.4
H41A	C4	C4A	C5	287.1	279.7
H41A	C4	C4A	C8A	106.5	99.7
N41	C4	H41A	H42	240.3	240.8
H41A	C4	N41	H41	167.3	49.8
C4A	C4	H42	N41	121.0	121.4
C4A	C4	H42	H41A	240.5	240.6
H42	C4	C4A	C5	47.6	39.1
H42	C4	C4A	C8A	227.0	219.0
N41	C4	H42	H41A	119.5	119.2
H42	C4	N41	H41	46.8	290.6
O2	N1	C6	C5	3.5	180.0
C4	C4A	C5	C6	179.4	179.8
C4A	C5	C6	H5	180.0	180.0
C6	C5	C4A	C8A	360.0	359.9
C7	C6	C5	N1	183.1	180.0
C5	C6	C7	C8	0.3	0.1
C5	C6	C7	H7	180.3	180.1
C5	C6	N1	O3	183.4	359.9
C1	C8A	C4A	C5	180.0	180.1
C5	C4A	C4	N41	167.6	159.4
C5	C4A	C4	H41A	287.1	279.7
C5	C4A	C4	H42	47.6	39.1
C4	C4A	C5	C8A	179.4	179.9
C6	C5	C4A	H5	180.0	180.0
C4A	C5	C6	C7	359.8	0.0
C4A	C5	C6	N1	176.7	180.0
C8	C8A	C4A	C5	0.2	0.2
C6	C5	H5	C4A	180.0	180.0
H5	C5	C6	C7	179.8	180.0
H5	C5	C6	N1	356.7	0.0
H5	C5	C4A	C8A	180.0	179.9
O2	N1	C6	C7	180.4	360.0
C7	C6	C5	C4A	359.8	0.0
C7	C6	C5	H5	179.8	180.0
C5	C6	C7	N1	176.9	180.0
C7	C6	N1	O3	0.3	180.0
C8	C7	C6	H7	180.0	180.0
C6	C7	C8	C8A	359.9	360.0
C6	C7	C8	H8	179.9	180.0
O2	N1	C6	O3	180.1	180.0
N1	C6	C5	C4A	176.7	180.0
N1	C6	C5	H5	356.7	0.0
C5	C6	N1	C7	183.1	180.0
N1	C6	C7	C8	183.4	180.0
N1	C6	C7	H7	3.4	0.0
C1	C8A	C8	C7	180.1	179.9
C8	C7	C6	N1	183.4	180.0
C6	C7	C8	H7	180.0	180.0
C8A	C8	C7	H8	180.0	180.0
C7	C8	C8A	C4A	359.9	359.9
H7	C7	C6	N1	3.4	0.0
C6	C7	H7	C8	180.0	180.0
H7	C7	C8	C8A	179.8	180.0
H7	C7	C8	H8	359.9	0.0
C8	C8A	C1	H11	39.5	44.6
C8	C8A	C1	H12	279.9	284.5
C1	C8A	C8	C4A	180.2	180.0
C4	C4A	C8A	C8	180.8	180.2
C5	C4A	C8A	C8	0.2	0.2
C8A	C8	C7	H7	179.8	180.0
C7	C8	C8A	H8	180.0	180.0
H8	C8	C7	H7	359.9	0.0
C7	C8	H8	C8A	180.0	180.0
H8	C8	C8A	C4A	179.9	179.9
O22	C22	C2	N41	286.7	294.7
O22	C22	C2	H2	44.8	55.0
C2	C22	O22	H221	240.0	240.0
C2	C22	O22	H222	120.0	120.0
H221	C22	O22	H222	240.0	240.0
H22	O22	C22	H221	256.4	300.0
H22	O22	C22	H222	16.4	60.0
H221	C22	C2	N41	166.7	174.7
H221	C22	C2	H2	284.8	295.0
C2	C22	H221	O22	120.0	120.0
C2	C22	H221	H222	240.0	240.0
H221	C22	O22	H22	256.4	300.0
O22	C22	H221	H222	120.0	120.0
H222	C22	C2	N41	46.7	54.7
H222	C22	C2	H2	164.8	175.0
C2	C22	H222	O22	240.0	240.0
C2	C22	H222	H221	120.0	120.0
H222	C22	O22	H22	16.4	60.0
O22	C22	H222	H221	240.0	240.0
C4A	C8A	C1	H11	219.6	224.6
C4A	C8A	C1	H12	100.1	104.6
C1	C8A	C4A	C8	179.8	180.0
C8A	C4A	C4	N41	347.0	339.4
C8A	C4A	C4	H41A	106.5	99.7
C8A	C4A	C4	H42	227.0	219.0
C4	C4A	C8A	C5	180.6	180.1
C8A	C4A	C5	H5	180.0	179.9
C4A	C8A	C8	H8	179.9	179.9
O2	N1	O3	C6	179.9	180.0
H41	N41	C2	H2	168.8	291.6
C2	N41	H41	C4	238.0	113.9
H41	N41	C4	H41A	167.3	49.8
H41	N41	C4	H42	46.8	290.6