PDB Chemical Component HNH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HNH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.325 |
1.319 |
| N1 |
C6 |
1.341 |
1.323 |
| C2 |
C3 |
1.382 |
1.393 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
C4 |
1.380 |
1.401 |
| C3 |
C7 |
1.491 |
1.480 |
| C4 |
C5 |
1.381 |
1.381 |
| C4 |
H4 |
1.080 |
1.080 |
| C5 |
C6 |
1.384 |
1.390 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
O6 |
1.351 |
1.356 |
| C7 |
C8 |
1.322 |
1.326 |
| C7 |
N11 |
1.315 |
1.388 |
| C8 |
C9 |
1.508 |
1.512 |
| C8 |
H8 |
1.080 |
1.080 |
| C9 |
C10 |
1.520 |
1.540 |
| C10 |
N11 |
1.447 |
1.470 |
| N11 |
C12 |
1.448 |
1.465 |
| C12 |
H12 |
1.100 |
1.090 |
| C12 |
H12A |
1.100 |
1.090 |
| C12 |
H12B |
1.101 |
1.090 |
| O6 |
H81 |
0.949 |
0.967 |
| C9 |
H9 |
1.100 |
1.090 |
| C9 |
H101 |
1.100 |
1.091 |
| C10 |
H10 |
1.100 |
1.090 |
| C10 |
H121 |
1.100 |
1.091 |
Bond Angles for HNH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
121.2 |
121.8 |
| N1 |
C2 |
C3 |
120.5 |
120.6 |
| N1 |
C2 |
H2 |
119.7 |
119.7 |
| N1 |
C6 |
C5 |
120.4 |
120.9 |
| N1 |
C6 |
O6 |
119.3 |
119.5 |
| C3 |
C2 |
H2 |
119.7 |
119.7 |
| C2 |
C3 |
C4 |
119.7 |
119.1 |
| C2 |
C3 |
C7 |
119.7 |
120.5 |
| C4 |
C3 |
C7 |
120.6 |
120.5 |
| C3 |
C4 |
C5 |
118.8 |
118.3 |
| C3 |
C4 |
H4 |
120.6 |
120.8 |
| C3 |
C7 |
C8 |
125.5 |
123.3 |
| C3 |
C7 |
N11 |
125.4 |
123.2 |
| C5 |
C4 |
H4 |
120.6 |
120.9 |
| C4 |
C5 |
C6 |
119.3 |
119.3 |
| C4 |
C5 |
H5 |
120.3 |
120.4 |
| C6 |
C5 |
H5 |
120.4 |
120.3 |
| C5 |
C6 |
O6 |
120.3 |
119.6 |
| C6 |
O6 |
H81 |
109.5 |
114.1 |
| C8 |
C7 |
N11 |
109.2 |
113.5 |
| C7 |
C8 |
C9 |
110.0 |
109.0 |
| C7 |
C8 |
H8 |
125.0 |
125.5 |
| C7 |
N11 |
C10 |
116.4 |
109.3 |
| C7 |
N11 |
C12 |
125.4 |
125.3 |
| C9 |
C8 |
H8 |
125.0 |
125.5 |
| C8 |
C9 |
C10 |
104.3 |
104.1 |
| C8 |
C9 |
H9 |
111.2 |
110.5 |
| C8 |
C9 |
H101 |
111.2 |
110.5 |
| C9 |
C10 |
N11 |
100.1 |
104.2 |
| C10 |
C9 |
H9 |
111.2 |
110.5 |
| C10 |
C9 |
H101 |
111.3 |
110.5 |
| C9 |
C10 |
H10 |
112.7 |
110.5 |
| C9 |
C10 |
H121 |
112.7 |
110.5 |
| C10 |
N11 |
C12 |
118.3 |
125.4 |
| N11 |
C10 |
H10 |
112.7 |
110.7 |
| N11 |
C10 |
H121 |
112.7 |
110.2 |
| N11 |
C12 |
H12 |
109.5 |
109.5 |
| N11 |
C12 |
H12A |
109.5 |
109.4 |
| N11 |
C12 |
H12B |
109.5 |
109.4 |
| H12 |
C12 |
H12A |
109.4 |
109.5 |
| H12 |
C12 |
H12B |
109.5 |
109.5 |
| H12A |
C12 |
H12B |
109.5 |
109.5 |
| H9 |
C9 |
H101 |
107.6 |
110.5 |
| H10 |
C10 |
H121 |
106.1 |
110.5 |
Torsion Angles for HNH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
C5 |
359.4 |
0.0 |
| C2 |
N1 |
C6 |
O6 |
179.7 |
180.1 |
| C3 |
C2 |
N1 |
H2 |
180.0 |
179.9 |
| N1 |
C2 |
C3 |
C4 |
359.6 |
0.1 |
| N1 |
C2 |
C3 |
C7 |
179.9 |
180.0 |
| C6 |
N1 |
C2 |
C3 |
0.6 |
359.9 |
| C6 |
N1 |
C2 |
H2 |
180.6 |
180.1 |
| C4 |
C5 |
C6 |
N1 |
0.4 |
360.0 |
| N1 |
C6 |
C5 |
H5 |
180.4 |
180.0 |
| C5 |
C6 |
N1 |
O6 |
179.7 |
180.0 |
| N1 |
C6 |
O6 |
H81 |
360.0 |
90.0 |
| C3 |
C2 |
N1 |
C6 |
0.6 |
359.9 |
| N1 |
C2 |
C3 |
H2 |
180.0 |
180.1 |
| C4 |
C3 |
C2 |
C7 |
179.7 |
180.1 |
| C2 |
C3 |
C4 |
C5 |
0.2 |
359.9 |
| C2 |
C3 |
C4 |
H4 |
180.2 |
180.0 |
| C2 |
C3 |
C7 |
C8 |
246.5 |
313.2 |
| C2 |
C3 |
C7 |
N11 |
66.5 |
132.9 |
| H2 |
C2 |
N1 |
C6 |
180.6 |
180.1 |
| N1 |
C2 |
H2 |
C3 |
180.0 |
179.9 |
| H2 |
C2 |
C3 |
C4 |
179.6 |
180.0 |
| H2 |
C2 |
C3 |
C7 |
359.9 |
359.9 |
| C4 |
C3 |
C2 |
H2 |
179.6 |
180.0 |
| C2 |
C3 |
C4 |
C7 |
180.3 |
179.9 |
| C4 |
C3 |
C7 |
C8 |
66.9 |
133.1 |
| C4 |
C3 |
C7 |
N11 |
246.8 |
312.8 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
| C3 |
C4 |
C5 |
C6 |
359.8 |
0.1 |
| C3 |
C4 |
C5 |
H5 |
179.8 |
180.0 |
| C7 |
C3 |
C2 |
H2 |
359.9 |
359.9 |
| C2 |
C3 |
C7 |
C4 |
179.7 |
180.1 |
| C7 |
C3 |
C4 |
C5 |
179.9 |
180.0 |
| C7 |
C3 |
C4 |
H4 |
359.9 |
0.1 |
| C8 |
C7 |
C3 |
N11 |
180.0 |
180.3 |
| C3 |
C7 |
C8 |
C9 |
179.9 |
180.0 |
| C3 |
C7 |
C8 |
H8 |
359.9 |
360.0 |
| C3 |
C7 |
N11 |
C10 |
180.2 |
179.8 |
| C3 |
C7 |
N11 |
C12 |
0.3 |
0.1 |
| N1 |
C6 |
C5 |
C4 |
0.4 |
360.0 |
| C5 |
C4 |
C3 |
C7 |
179.9 |
180.0 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
| C4 |
C5 |
C6 |
O6 |
180.1 |
179.9 |
| H4 |
C4 |
C3 |
C7 |
359.9 |
0.1 |
| C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
| H4 |
C4 |
C5 |
C6 |
179.8 |
180.0 |
| H4 |
C4 |
C5 |
H5 |
359.8 |
359.9 |
| N1 |
C6 |
C5 |
O6 |
180.3 |
180.0 |
| C6 |
C5 |
C4 |
H4 |
179.8 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
| C5 |
C6 |
O6 |
H81 |
180.3 |
270.0 |
| H5 |
C5 |
C4 |
H4 |
359.8 |
359.9 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
180.1 |
| H5 |
C5 |
C6 |
O6 |
0.1 |
360.0 |
| N1 |
C6 |
O6 |
C5 |
179.7 |
180.0 |
| O6 |
C6 |
C5 |
H5 |
0.1 |
360.0 |
| C3 |
C7 |
C8 |
N11 |
180.0 |
179.7 |
| C8 |
C7 |
N11 |
C10 |
0.2 |
359.6 |
| C8 |
C7 |
N11 |
C12 |
180.2 |
179.8 |
| C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
| C7 |
C8 |
C9 |
C10 |
360.0 |
360.0 |
| C7 |
C8 |
C9 |
H9 |
120.0 |
118.7 |
| C7 |
C8 |
C9 |
H101 |
239.9 |
241.3 |
| C3 |
C7 |
N11 |
C8 |
180.0 |
180.3 |
| N11 |
C7 |
C8 |
C9 |
359.9 |
0.3 |
| N11 |
C7 |
C8 |
H8 |
180.0 |
180.3 |
| C9 |
C10 |
N11 |
C7 |
359.8 |
0.4 |
| C10 |
N11 |
C7 |
C12 |
179.9 |
179.8 |
| C7 |
N11 |
C10 |
H10 |
239.9 |
241.6 |
| C7 |
N11 |
C10 |
H121 |
119.8 |
119.0 |
| C7 |
N11 |
C12 |
H12 |
180.0 |
84.8 |
| C7 |
N11 |
C12 |
H12A |
300.0 |
204.8 |
| C7 |
N11 |
C12 |
H12B |
60.0 |
324.8 |
| C9 |
C8 |
C7 |
N11 |
359.9 |
0.3 |
| C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
| C8 |
C9 |
C10 |
N11 |
0.1 |
359.8 |
| C10 |
C9 |
C8 |
H9 |
240.0 |
241.3 |
| C10 |
C9 |
C8 |
H101 |
120.0 |
118.7 |
| C8 |
C9 |
C10 |
H10 |
120.1 |
118.7 |
| C8 |
C9 |
C10 |
H121 |
240.1 |
241.4 |
| H9 |
C9 |
C8 |
H101 |
240.0 |
237.3 |
| H8 |
C8 |
C7 |
N11 |
180.0 |
180.3 |
| C7 |
C8 |
H8 |
C9 |
180.0 |
180.0 |
| H8 |
C8 |
C9 |
C10 |
179.9 |
180.0 |
| H8 |
C8 |
C9 |
H9 |
300.0 |
298.7 |
| H8 |
C8 |
C9 |
H101 |
59.9 |
61.3 |
| C7 |
N11 |
C10 |
C9 |
359.8 |
0.4 |
| C10 |
C9 |
C8 |
H8 |
179.9 |
180.0 |
| C8 |
C9 |
C10 |
H9 |
120.0 |
118.7 |
| C8 |
C9 |
C10 |
H101 |
240.0 |
241.4 |
| C9 |
C10 |
N11 |
C12 |
179.8 |
180.2 |
| N11 |
C10 |
C9 |
H10 |
240.0 |
241.1 |
| N11 |
C10 |
C9 |
H121 |
120.0 |
118.4 |
| H9 |
C9 |
C10 |
H101 |
120.0 |
122.7 |
| H10 |
C10 |
C9 |
H121 |
239.9 |
237.3 |
| C7 |
N11 |
C10 |
C12 |
180.1 |
180.2 |
| N11 |
C10 |
C9 |
H9 |
240.1 |
241.1 |
| N11 |
C10 |
C9 |
H101 |
120.1 |
118.4 |
| C9 |
C10 |
N11 |
H10 |
120.0 |
118.8 |
| C9 |
C10 |
N11 |
H121 |
240.0 |
241.4 |
| C10 |
N11 |
C12 |
H12 |
0.1 |
265.1 |
| C10 |
N11 |
C12 |
H12A |
120.1 |
25.1 |
| C10 |
N11 |
C12 |
H12B |
240.1 |
145.0 |
| H10 |
C10 |
N11 |
H121 |
120.0 |
122.6 |
| C7 |
N11 |
C12 |
C10 |
179.9 |
179.7 |
| C12 |
N11 |
C10 |
H10 |
59.8 |
61.4 |
| C12 |
N11 |
C10 |
H121 |
299.7 |
298.8 |
| H12 |
C12 |
N11 |
H12A |
240.0 |
240.0 |
| H12 |
C12 |
N11 |
H12B |
120.0 |
120.1 |
| H12A |
C12 |
N11 |
H12B |
240.0 |
240.1 |
| N11 |
C12 |
H12 |
H12A |
120.0 |
120.0 |
| N11 |
C12 |
H12 |
H12B |
240.0 |
240.0 |
| H12A |
C12 |
H12 |
H12B |
120.0 |
120.0 |
| N11 |
C12 |
H12A |
H12 |
240.0 |
240.0 |
| N11 |
C12 |
H12A |
H12B |
120.0 |
119.9 |
| H12 |
C12 |
H12A |
H12B |
240.0 |
239.9 |
| N11 |
C12 |
H12B |
H12 |
120.1 |
120.0 |
| N11 |
C12 |
H12B |
H12A |
240.0 |
240.1 |
| H12 |
C12 |
H12B |
H12A |
120.0 |
120.0 |
| H9 |
C9 |
C8 |
H8 |
300.0 |
298.7 |
| C8 |
C9 |
H9 |
C10 |
244.2 |
245.3 |
| C8 |
C9 |
H9 |
H101 |
122.1 |
122.6 |
| H9 |
C9 |
C10 |
N11 |
240.1 |
241.1 |
| C10 |
C9 |
H9 |
H101 |
237.9 |
237.4 |
| H9 |
C9 |
C10 |
H10 |
0.1 |
0.0 |
| H9 |
C9 |
C10 |
H121 |
120.1 |
122.7 |
| H101 |
C9 |
C8 |
H8 |
59.9 |
61.3 |
| C8 |
C9 |
H101 |
C10 |
115.8 |
114.7 |
| C8 |
C9 |
H101 |
H9 |
237.9 |
237.3 |
| H101 |
C9 |
C10 |
N11 |
120.1 |
118.4 |
| C10 |
C9 |
H101 |
H9 |
122.1 |
122.6 |
| H101 |
C9 |
C10 |
H10 |
240.1 |
237.4 |
| H101 |
C9 |
C10 |
H121 |
0.1 |
0.0 |
| C9 |
C10 |
H10 |
N11 |
247.6 |
245.1 |
| H10 |
C10 |
C9 |
H9 |
0.1 |
0.0 |
| H10 |
C10 |
C9 |
H101 |
240.1 |
237.4 |
| C9 |
C10 |
H10 |
H121 |
123.8 |
122.7 |
| H10 |
C10 |
N11 |
C12 |
59.8 |
61.4 |
| N11 |
C10 |
H10 |
H121 |
236.2 |
237.5 |
| C9 |
C10 |
H121 |
N11 |
112.4 |
114.6 |
| H121 |
C10 |
C9 |
H9 |
120.1 |
122.7 |
| H121 |
C10 |
C9 |
H101 |
0.1 |
0.0 |
| C9 |
C10 |
H121 |
H10 |
236.2 |
237.4 |
| H121 |
C10 |
N11 |
C12 |
299.7 |
298.8 |
| N11 |
C10 |
H121 |
H10 |
123.8 |
122.7 |