PDB Chemical Component HNA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HNA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.438 |
1.397 |
C1 |
C6 |
1.408 |
1.393 |
C1 |
O1 |
1.381 |
1.357 |
C2 |
C3 |
1.445 |
1.409 |
C2 |
C16 |
1.517 |
1.475 |
C3 |
C4 |
1.417 |
1.390 |
C3 |
C13 |
1.517 |
1.479 |
C4 |
C5 |
1.420 |
1.387 |
C4 |
N4 |
1.433 |
1.480 |
C5 |
C6 |
1.410 |
1.379 |
C5 |
HC5 |
1.103 |
1.080 |
C6 |
HC6 |
1.104 |
1.080 |
C13 |
C14 |
1.480 |
1.479 |
C13 |
O13 |
1.229 |
1.216 |
C14 |
C15 |
1.434 |
1.409 |
C14 |
C25 |
1.422 |
1.389 |
C15 |
C16 |
1.489 |
1.476 |
C15 |
C22 |
1.440 |
1.396 |
C16 |
O16 |
1.233 |
1.217 |
C22 |
C23 |
1.419 |
1.393 |
C22 |
O22 |
1.393 |
1.356 |
C23 |
C24 |
1.415 |
1.379 |
C23 |
HC23 |
1.103 |
1.080 |
C24 |
C25 |
1.414 |
1.387 |
C24 |
HC24 |
1.103 |
1.080 |
C25 |
HC25 |
1.103 |
1.080 |
O1 |
HO1 |
0.950 |
0.967 |
O22 |
HO22 |
0.950 |
0.967 |
N4 |
O4B |
1.285 |
1.217 |
N4 |
O4A |
1.259 |
1.218 |
Bond Angles for HNA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.3 |
119.7 |
C2 |
C1 |
O1 |
121.8 |
120.2 |
C1 |
C2 |
C3 |
119.6 |
119.6 |
C1 |
C2 |
C16 |
119.8 |
120.7 |
C6 |
C1 |
O1 |
117.8 |
120.2 |
C1 |
C6 |
C5 |
119.4 |
120.4 |
C1 |
C6 |
HC6 |
120.2 |
119.8 |
C1 |
O1 |
HO1 |
121.8 |
106.8 |
C3 |
C2 |
C16 |
120.5 |
119.7 |
C2 |
C3 |
C4 |
119.0 |
119.8 |
C2 |
C3 |
C13 |
117.7 |
119.6 |
C2 |
C16 |
C15 |
120.5 |
119.2 |
C2 |
C16 |
O16 |
120.0 |
120.4 |
C4 |
C3 |
C13 |
123.2 |
120.6 |
C3 |
C4 |
C5 |
119.9 |
120.0 |
C3 |
C4 |
N4 |
126.3 |
120.0 |
C3 |
C13 |
C14 |
121.2 |
119.2 |
C3 |
C13 |
O13 |
122.1 |
120.4 |
C5 |
C4 |
N4 |
113.8 |
120.0 |
C4 |
C5 |
C6 |
121.6 |
120.5 |
C4 |
C5 |
HC5 |
119.6 |
119.7 |
C4 |
N4 |
O4B |
117.7 |
120.0 |
C4 |
N4 |
O4A |
124.4 |
120.0 |
C6 |
C5 |
HC5 |
118.8 |
119.7 |
C5 |
C6 |
HC6 |
120.4 |
119.8 |
C14 |
C13 |
O13 |
116.7 |
120.4 |
C13 |
C14 |
C15 |
121.0 |
119.6 |
C13 |
C14 |
C25 |
119.1 |
120.6 |
C15 |
C14 |
C25 |
119.9 |
119.8 |
C14 |
C15 |
C16 |
119.0 |
119.7 |
C14 |
C15 |
C22 |
119.2 |
119.6 |
C14 |
C25 |
C24 |
120.5 |
119.9 |
C14 |
C25 |
HC25 |
120.1 |
120.1 |
C16 |
C15 |
C22 |
121.8 |
120.6 |
C15 |
C16 |
O16 |
119.4 |
120.4 |
C15 |
C22 |
C23 |
119.8 |
119.6 |
C15 |
C22 |
O22 |
122.0 |
120.2 |
C23 |
C22 |
O22 |
118.2 |
120.2 |
C22 |
C23 |
C24 |
120.5 |
120.4 |
C22 |
C23 |
HC23 |
119.9 |
119.8 |
C22 |
O22 |
HO22 |
122.0 |
106.8 |
C24 |
C23 |
HC23 |
119.6 |
119.8 |
C23 |
C24 |
C25 |
120.1 |
120.6 |
C23 |
C24 |
HC24 |
120.0 |
119.7 |
C25 |
C24 |
HC24 |
119.9 |
119.7 |
C24 |
C25 |
HC25 |
119.5 |
120.0 |
O4B |
N4 |
O4A |
117.9 |
120.0 |
Torsion Angles for HNA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
O1 |
178.3 |
180.0 |
C2 |
C1 |
C6 |
C5 |
1.5 |
359.9 |
C2 |
C1 |
C6 |
HC6 |
181.5 |
180.0 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
270.0 |
C3 |
C2 |
C1 |
C16 |
177.0 |
180.1 |
C1 |
C2 |
C3 |
C4 |
3.3 |
359.9 |
C1 |
C2 |
C3 |
C13 |
179.6 |
179.9 |
C1 |
C2 |
C16 |
C15 |
179.7 |
166.1 |
C1 |
C2 |
C16 |
O16 |
358.3 |
346.4 |
C2 |
C1 |
C6 |
O1 |
181.7 |
180.0 |
C6 |
C1 |
C2 |
C3 |
357.5 |
0.1 |
C6 |
C1 |
C2 |
C16 |
180.5 |
180.1 |
C6 |
C1 |
O1 |
HO1 |
1.7 |
90.0 |
C4 |
C5 |
C6 |
C1 |
358.7 |
360.0 |
C1 |
C6 |
C5 |
HC5 |
178.7 |
180.0 |
C5 |
C6 |
C1 |
HC6 |
180.0 |
180.0 |
C2 |
C1 |
O1 |
C6 |
178.3 |
180.0 |
O1 |
C1 |
C2 |
C3 |
179.2 |
180.1 |
O1 |
C1 |
C2 |
C16 |
2.2 |
0.0 |
O1 |
C1 |
C6 |
C5 |
179.9 |
180.0 |
O1 |
C1 |
C6 |
HC6 |
359.8 |
0.0 |
C3 |
C2 |
C1 |
C6 |
357.5 |
0.1 |
C3 |
C2 |
C1 |
O1 |
179.2 |
180.1 |
C1 |
C2 |
C3 |
C16 |
183.0 |
179.9 |
C3 |
C2 |
C16 |
C15 |
2.8 |
346.1 |
C3 |
C2 |
C16 |
O16 |
181.3 |
166.3 |
C4 |
C3 |
C2 |
C13 |
183.8 |
180.0 |
C2 |
C3 |
C4 |
C5 |
356.8 |
0.0 |
C2 |
C3 |
C4 |
N4 |
179.2 |
180.1 |
C2 |
C3 |
C13 |
C14 |
3.2 |
13.7 |
C2 |
C3 |
C13 |
O13 |
180.8 |
193.6 |
C16 |
C2 |
C1 |
C6 |
180.5 |
180.1 |
C16 |
C2 |
C1 |
O1 |
2.2 |
0.0 |
C1 |
C2 |
C16 |
C3 |
176.9 |
180.1 |
C16 |
C2 |
C3 |
C4 |
180.3 |
180.0 |
C16 |
C2 |
C3 |
C13 |
356.5 |
360.0 |
C14 |
C15 |
C16 |
C2 |
358.5 |
14.2 |
C2 |
C16 |
C15 |
C22 |
179.3 |
193.5 |
C15 |
C16 |
C2 |
O16 |
181.4 |
179.8 |
C4 |
C3 |
C2 |
C16 |
180.3 |
180.0 |
C2 |
C3 |
C4 |
C13 |
176.0 |
180.0 |
C4 |
C3 |
C13 |
C14 |
179.2 |
193.7 |
C4 |
C3 |
C13 |
O13 |
356.8 |
13.7 |
C5 |
C4 |
C3 |
N4 |
177.6 |
180.0 |
C3 |
C4 |
C5 |
C6 |
2.2 |
0.0 |
C3 |
C4 |
C5 |
HC5 |
182.2 |
180.1 |
C3 |
C4 |
N4 |
O4B |
70.4 |
227.4 |
C3 |
C4 |
N4 |
O4A |
251.9 |
47.3 |
C13 |
C3 |
C2 |
C16 |
356.5 |
360.0 |
C2 |
C3 |
C13 |
C4 |
183.9 |
180.0 |
C13 |
C3 |
C4 |
C5 |
180.8 |
180.0 |
C13 |
C3 |
C4 |
N4 |
3.2 |
0.0 |
C14 |
C13 |
C3 |
O13 |
182.4 |
180.0 |
C3 |
C13 |
C14 |
C15 |
357.9 |
346.6 |
C3 |
C13 |
C14 |
C25 |
179.2 |
166.4 |
C1 |
C6 |
C5 |
C4 |
358.7 |
360.0 |
C5 |
C4 |
C3 |
C13 |
180.8 |
180.0 |
C3 |
C4 |
C5 |
N4 |
182.1 |
180.0 |
C5 |
C4 |
N4 |
O4B |
252.6 |
47.4 |
C5 |
C4 |
N4 |
O4A |
74.2 |
227.3 |
C6 |
C5 |
C4 |
HC5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
HC6 |
178.7 |
179.9 |
N4 |
C4 |
C3 |
C13 |
3.2 |
0.0 |
C3 |
C4 |
N4 |
C5 |
177.8 |
180.0 |
N4 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
N4 |
C4 |
C5 |
HC5 |
0.1 |
0.0 |
O4B |
N4 |
C4 |
O4A |
178.4 |
180.1 |
C5 |
C6 |
C1 |
O1 |
179.9 |
180.0 |
C1 |
C6 |
C5 |
HC6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
N4 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
HC5 |
180.0 |
180.0 |
HC5 |
C5 |
C4 |
N4 |
0.1 |
0.0 |
C4 |
C5 |
HC5 |
C6 |
180.0 |
180.0 |
HC5 |
C5 |
C6 |
HC6 |
358.7 |
359.9 |
HC6 |
C6 |
C1 |
O1 |
359.8 |
0.0 |
C1 |
C6 |
HC6 |
C5 |
180.0 |
180.0 |
HC6 |
C6 |
C5 |
HC5 |
358.7 |
359.9 |
C3 |
C13 |
C14 |
O13 |
177.7 |
180.0 |
C15 |
C14 |
C13 |
C25 |
178.8 |
180.2 |
C13 |
C14 |
C15 |
C16 |
1.2 |
359.5 |
C13 |
C14 |
C15 |
C22 |
180.4 |
180.2 |
C13 |
C14 |
C25 |
C24 |
179.4 |
180.1 |
C13 |
C14 |
C25 |
HC25 |
359.4 |
0.0 |
C3 |
C13 |
O13 |
C14 |
182.3 |
180.0 |
O13 |
C13 |
C14 |
C15 |
180.2 |
166.6 |
O13 |
C13 |
C14 |
C25 |
1.4 |
346.4 |
C2 |
C16 |
C15 |
C14 |
358.5 |
14.2 |
C15 |
C14 |
C13 |
O13 |
180.2 |
166.6 |
C13 |
C14 |
C15 |
C25 |
181.2 |
179.8 |
C15 |
C14 |
C25 |
C24 |
0.6 |
359.9 |
C15 |
C14 |
C25 |
HC25 |
180.6 |
179.8 |
C16 |
C15 |
C14 |
C22 |
180.8 |
179.3 |
C14 |
C15 |
C16 |
O16 |
179.9 |
194.0 |
C14 |
C15 |
C22 |
C23 |
0.5 |
359.6 |
C14 |
C15 |
C22 |
O22 |
180.5 |
179.9 |
C25 |
C14 |
C13 |
O13 |
1.4 |
346.4 |
C13 |
C14 |
C25 |
C15 |
178.8 |
180.2 |
C25 |
C14 |
C15 |
C16 |
179.9 |
179.7 |
C25 |
C14 |
C15 |
C22 |
359.2 |
0.4 |
C23 |
C24 |
C25 |
C14 |
359.9 |
360.0 |
C14 |
C25 |
C24 |
HC24 |
179.9 |
180.0 |
C24 |
C25 |
C14 |
HC25 |
180.0 |
180.1 |
C2 |
C16 |
C15 |
O16 |
178.6 |
180.2 |
C16 |
C15 |
C14 |
C25 |
179.9 |
179.7 |
C14 |
C15 |
C16 |
C22 |
179.2 |
180.7 |
C16 |
C15 |
C22 |
C23 |
179.8 |
180.3 |
C16 |
C15 |
C22 |
O22 |
359.7 |
0.6 |
C22 |
C15 |
C14 |
C25 |
359.2 |
0.4 |
C14 |
C15 |
C22 |
C16 |
180.8 |
179.3 |
C22 |
C15 |
C16 |
O16 |
0.7 |
13.3 |
C23 |
C22 |
C15 |
O22 |
180.0 |
179.7 |
C15 |
C22 |
C23 |
C24 |
360.0 |
0.2 |
C15 |
C22 |
C23 |
HC23 |
180.0 |
180.2 |
C15 |
C22 |
O22 |
HO22 |
180.0 |
269.7 |
C2 |
C16 |
O16 |
C15 |
181.4 |
179.8 |
O16 |
C16 |
C15 |
C22 |
0.7 |
13.3 |
C15 |
C22 |
C23 |
O22 |
180.0 |
180.3 |
C23 |
C22 |
O22 |
HO22 |
360.0 |
90.0 |
C24 |
C23 |
C22 |
HC23 |
180.0 |
180.0 |
C22 |
C23 |
C24 |
C25 |
359.8 |
360.0 |
C22 |
C23 |
C24 |
HC24 |
179.8 |
180.0 |
C15 |
C22 |
O22 |
C23 |
180.0 |
179.7 |
O22 |
C22 |
C23 |
C24 |
180.0 |
180.0 |
O22 |
C22 |
C23 |
HC23 |
360.0 |
360.0 |
C14 |
C25 |
C24 |
C23 |
359.9 |
360.0 |
C24 |
C23 |
C22 |
O22 |
180.0 |
180.0 |
C22 |
C23 |
C24 |
HC23 |
180.0 |
180.0 |
C25 |
C24 |
C23 |
HC24 |
180.0 |
180.0 |
C23 |
C24 |
C25 |
HC25 |
179.9 |
180.0 |
HC23 |
C23 |
C22 |
O22 |
360.0 |
360.0 |
C22 |
C23 |
HC23 |
C24 |
180.0 |
180.0 |
HC23 |
C23 |
C24 |
C25 |
179.8 |
180.0 |
HC23 |
C23 |
C24 |
HC24 |
359.8 |
360.0 |
C14 |
C25 |
C24 |
HC25 |
180.0 |
179.9 |
C25 |
C24 |
C23 |
HC23 |
179.8 |
180.0 |
C23 |
C24 |
C25 |
HC24 |
180.0 |
180.0 |
HC24 |
C24 |
C23 |
HC23 |
359.8 |
360.0 |
C23 |
C24 |
HC24 |
C25 |
180.0 |
180.0 |
HC24 |
C24 |
C25 |
HC25 |
359.9 |
0.1 |
C14 |
C25 |
HC25 |
C24 |
180.0 |
180.1 |
HC25 |
C25 |
C24 |
HC24 |
359.9 |
0.1 |
C4 |
N4 |
O4B |
O4A |
181.5 |
179.9 |
C4 |
N4 |
O4A |
O4B |
178.4 |
180.1 |