PDB Chemical Component HMU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HMU

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.430 1.346
N1 C6 1.396 1.368
N1 H1 1.020 0.969
C2 O2 1.367 1.216
C2 N3 1.439 1.345
N3 C4 1.420 1.348
N3 H2 1.019 0.970
C4 O4 1.263 1.218
C4 C5 1.505 1.415
O3 CM5 1.405 1.429
O3 H3 0.990 0.968
C5 CM5 1.568 1.508
C5 C6 1.426 1.350
CM5 HM51 1.100 1.089
CM5 HM52 1.100 1.090
C6 H6 1.061 1.080

Bond Angles for HMU

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 127.3 120.6
C2 N1 H1 106.0 119.7
N1 C2 O2 119.6 119.5
N1 C2 N3 111.7 120.9
C6 N1 H1 106.0 119.7
N1 C6 C5 121.5 119.7
N1 C6 H6 119.2 120.2
O2 C2 N3 128.7 119.6
C2 N3 C4 124.4 120.3
C2 N3 H2 118.5 119.8
C4 N3 H2 117.1 119.8
N3 C4 O4 123.7 120.3
N3 C4 C5 120.9 119.3
O4 C4 C5 115.2 120.3
C4 C5 CM5 126.3 120.4
C4 C5 C6 114.0 119.1
CM5 O3 H3 109.5 106.8
O3 CM5 C5 113.2 109.5
O3 CM5 HM51 108.5 109.5
O3 CM5 HM52 107.3 109.4
CM5 C5 C6 119.7 120.4
C5 CM5 HM51 108.5 109.5
C5 CM5 HM52 107.3 109.4
C5 C6 H6 119.2 120.1
HM51 CM5 HM52 112.1 109.5

Torsion Angles for HMU

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 H1 125.3 180.0
C2 N1 C6 C5 2.6 0.0
C2 N1 C6 H6 182.6 180.0
O2 C2 N1 N3 180.5 180.0
N1 C2 N3 C4 358.7 359.8
N1 C2 N3 H2 178.7 180.0
C2 N1 C6 H1 234.7 180.0
C6 N1 C2 O2 180.3 180.0
C6 N1 C2 N3 359.8 360.0
C4 C5 C6 N1 356.8 0.1
CM5 C5 C6 N1 177.2 180.0
C5 C6 N1 H6 180.0 180.1
C2 N1 H1 C6 137.5 180.0
H1 N1 C2 O2 55.0 360.0
H1 N1 C2 N3 234.5 180.0
H1 N1 C6 C5 127.9 180.0
H1 N1 C6 H6 307.9 360.0
O2 C2 N1 C6 180.3 180.0
O2 C2 N1 H1 55.0 360.0
N1 C2 O2 N3 179.4 180.0
O2 C2 N3 C4 178.1 179.8
O2 C2 N3 H2 358.1 0.0
N3 C2 N1 C6 359.8 360.0
N3 C2 N1 H1 234.5 180.0
N1 C2 N3 O2 180.6 180.0
C4 N3 C2 H2 180.0 179.8
C2 N3 C4 O4 184.2 180.0
C2 N3 C4 C5 0.5 0.4
C2 N3 C4 H2 180.0 180.2
O4 C4 N3 C5 183.7 179.6
N3 C4 C5 CM5 181.3 179.8
N3 C4 C5 C6 1.8 359.6
C2 N3 H2 C4 180.0 179.8
H2 N3 C4 O4 4.2 359.8
H2 N3 C4 C5 180.5 180.2
O4 C4 N3 H2 4.2 359.8
N3 C4 O4 C5 176.5 180.4
O4 C4 C5 CM5 357.9 0.2
O4 C4 C5 C6 178.4 180.0
N1 C6 C5 C4 356.8 0.1
C5 C4 N3 H2 180.5 180.2
N3 C4 C5 O4 183.4 179.6
O3 CM5 C5 C4 41.6 179.8
CM5 C5 C4 C6 179.5 180.2
C4 C5 CM5 HM51 162.2 59.8
C4 C5 CM5 HM52 283.5 299.7
C4 C5 C6 H6 176.8 180.2
C4 C5 CM5 O3 41.6 179.8
O3 CM5 C5 C6 221.1 0.0
C5 CM5 O3 HM51 120.6 240.0
C5 CM5 O3 HM52 241.8 119.9
HM51 CM5 O3 HM52 121.3 239.9
H3 O3 CM5 C5 147.4 180.0
H3 O3 CM5 HM51 26.8 300.0
H3 O3 CM5 HM52 265.5 60.1
N1 C6 C5 CM5 177.2 180.0
C4 C5 CM5 C6 180.5 179.8
C5 CM5 O3 H3 147.4 180.0
O3 CM5 C5 HM51 239.5 120.1
O3 CM5 C5 HM52 118.2 240.1
CM5 C5 C6 H6 357.2 0.0
HM51 CM5 C5 HM52 238.7 120.0
C5 C6 N1 H1 127.9 180.0
N1 C6 C5 H6 180.0 179.9
C4 C5 C6 CM5 179.6 180.2
C6 C5 CM5 HM51 341.7 240.0
C6 C5 CM5 HM52 102.9 119.9
HM51 CM5 O3 H3 26.8 300.0
O3 CM5 HM51 C5 123.4 240.0
O3 CM5 HM51 HM52 241.7 120.0
HM51 CM5 C5 C6 341.7 240.0
C5 CM5 HM51 HM52 118.3 240.0
HM52 CM5 O3 H3 265.5 60.1
O3 CM5 HM52 C5 238.1 119.9
O3 CM5 HM52 HM51 119.0 239.9
HM52 CM5 C5 C6 102.9 119.9
C5 CM5 HM52 HM51 240.9 120.0
H6 C6 N1 H1 307.9 360.0
N1 C6 H6 C5 180.0 180.1