PDB Chemical Component HMN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HMN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1A	1.250	1.208
C1	O1B	1.240	1.342
C1	C2	1.506	1.506
O1B	HO1B	0.950	0.967
C2	O2	1.441	1.428
C2	C3	1.525	1.531
C2	HC2	1.115	1.090
O2	HO2	0.950	0.966
C3	C4	1.551	1.530
C3	HC31	1.114	1.089
C3	HC32	1.115	1.089
C4	O4	1.438	1.428
C4	C5	1.522	1.528
C4	HC4	1.116	1.090
O4	HO4	0.951	0.968
C5	N2	1.470	1.464
C5	C6	1.558	1.529
C5	HC5	1.114	1.090
N2	C10	1.327	1.348
N2	HN2	1.020	0.970
C10	O10	1.235	1.212
C10	C11	1.522	1.507
C11	H111	1.114	1.090
C11	H112	1.115	1.091
C11	H113	1.116	1.089
C6	O6	1.446	1.429
C6	C7	1.540	1.530
C6	HC6	1.116	1.089
O6	HO6	0.951	0.967
C7	O7	1.416	1.429
C7	C8	1.530	1.529
C7	HC7	1.115	1.089
O7	HO7	0.950	0.967
C8	O8	1.408	1.428
C8	C9	1.517	1.529
C8	HC8	1.115	1.090
O8	HO8	0.950	0.967
C9	O9	1.421	1.429
C9	HC91	1.116	1.090
C9	HC92	1.114	1.089
O9	HO9	0.949	0.966

Bond Angles for HMN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1A	C1	O1B	125.2	120.0
O1A	C1	C2	118.5	120.0
O1B	C1	C2	116.3	120.0
C1	O1B	HO1B	125.1	120.0
C1	C2	O2	113.1	109.5
C1	C2	C3	107.4	109.5
C1	C2	HC2	108.3	109.5
O2	C2	C3	108.9	109.5
O2	C2	HC2	106.7	109.4
C2	O2	HO2	113.1	106.7
C3	C2	HC2	112.5	109.4
C2	C3	C4	104.2	109.5
C2	C3	HC31	114.2	109.4
C2	C3	HC32	114.2	109.4
C4	C3	HC31	114.2	109.5
C4	C3	HC32	114.2	109.5
C3	C4	O4	104.2	109.5
C3	C4	C5	107.2	109.5
C3	C4	HC4	115.3	109.5
HC31	C3	HC32	96.3	109.5
O4	C4	C5	112.3	109.5
O4	C4	HC4	110.3	109.4
C4	O4	HO4	104.2	106.8
C5	C4	HC4	107.6	109.5
C4	C5	N2	106.5	109.5
C4	C5	C6	113.1	109.5
C4	C5	HC5	108.9	109.5
N2	C5	C6	109.0	109.4
N2	C5	HC5	113.1	109.4
C5	N2	C10	120.1	120.0
C5	N2	HN2	125.0	120.0
C6	C5	HC5	106.4	109.5
C5	C6	O6	106.3	109.4
C5	C6	C7	107.2	109.6
C5	C6	HC6	112.2	109.5
C10	N2	HN2	114.9	119.9
N2	C10	O10	125.2	120.0
N2	C10	C11	116.8	120.0
O10	C10	C11	118.0	120.0
C10	C11	H111	116.8	109.5
C10	C11	H112	109.5	109.4
C10	C11	H113	109.5	109.5
H111	C11	H112	109.6	109.4
H111	C11	H113	109.6	109.5
H112	C11	H113	100.6	109.4
O6	C6	C7	107.2	109.4
O6	C6	HC6	112.2	109.5
C6	O6	HO6	106.3	106.8
C7	C6	HC6	111.3	109.4
C6	C7	O7	109.2	109.4
C6	C7	C8	108.7	109.6
C6	C7	HC7	109.7	109.4
O7	C7	C8	108.0	109.4
O7	C7	HC7	110.4	109.4
C7	O7	HO7	109.2	106.7
C8	C7	HC7	110.8	109.5
C7	C8	O8	106.9	109.5
C7	C8	C9	108.5	109.5
C7	C8	HC8	112.4	109.5
O8	C8	C9	111.1	109.5
O8	C8	HC8	109.7	109.4
C8	O8	HO8	106.9	106.8
C9	C8	HC8	108.2	109.5
C8	C9	O9	111.2	109.5
C8	C9	HC91	111.6	109.4
C8	C9	HC92	111.6	109.5
O9	C9	HC91	111.6	109.4
O9	C9	HC92	111.6	109.5
C9	O9	HO9	111.2	106.9
HC91	C9	HC92	98.8	109.4

Torsion Angles for HMN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1B	C1	O1A	C2	178.9	180.0
O1A	C1	O1B	HO1B	180.0	360.0
O1A	C1	C2	O2	198.6	0.0
O1A	C1	C2	C3	78.5	240.0
O1A	C1	C2	HC2	316.7	120.0
O1A	C1	O1B	C2	181.1	180.0
O1B	C1	C2	O2	19.7	180.0
O1B	C1	C2	C3	259.5	60.0
O1B	C1	C2	HC2	137.7	300.0
O1A	C1	C2	O1B	179.0	180.0
C2	C1	O1B	HO1B	358.9	180.0
O2	C2	C1	C3	120.2	120.1
O2	C2	C1	HC2	241.9	240.0
C1	C2	O2	HO2	180.0	300.0
C3	C2	C1	HC2	121.8	120.0
C1	C2	C3	C4	196.3	180.0
C1	C2	C3	HC31	321.5	60.0
C1	C2	C3	HC32	71.1	300.0
HO1B	O1B	C1	C2	358.9	180.0
C1	C2	O2	C3	240.7	239.9
C1	C2	O2	HC2	118.9	120.0
C3	C2	O2	HC2	238.3	240.1
O2	C2	C3	C4	73.5	59.9
O2	C2	C3	HC31	198.7	299.9
O2	C2	C3	HC32	308.3	179.9
C1	C2	C3	O2	122.8	120.1
C1	C2	C3	HC2	240.9	240.0
O2	C2	C3	HC2	118.1	119.9
C3	C2	O2	HO2	299.3	60.0
C4	C3	C2	HC31	234.7	120.0
C4	C3	C2	HC32	125.2	240.0
C2	C3	C4	O4	282.5	300.0
C2	C3	C4	C5	163.3	180.0
C2	C3	C4	HC4	43.6	60.0
HC31	C3	C2	HC32	250.5	120.0
C1	C2	HC2	O2	237.9	240.0
C1	C2	HC2	C3	118.6	120.0
O2	C2	HC2	C3	240.6	240.0
HC2	C2	O2	HO2	61.1	180.0
HC2	C2	C3	C4	315.4	300.0
HC2	C2	C3	HC31	80.6	180.0
HC2	C2	C3	HC32	190.1	60.0
HO2	O2	C2	C3	299.3	60.0
HO2	O2	C2	HC2	61.1	180.0
C4	C3	C2	HC2	315.4	300.0
C2	C3	C4	HC31	125.3	240.0
C2	C3	C4	HC32	234.7	120.0
HC31	C3	C4	HC32	109.5	239.9
O4	C4	C3	C5	119.2	120.0
O4	C4	C3	HC4	238.9	240.0
C3	C4	O4	HO4	180.0	304.1
C5	C4	C3	HC4	119.7	120.0
C3	C4	C5	N2	59.1	58.6
C3	C4	C5	C6	178.9	178.5
C3	C4	C5	HC5	296.9	298.6
HC31	C3	C2	HC2	80.6	180.0
C2	C3	HC31	C4	240.2	120.0
C2	C3	HC31	HC32	120.2	240.0
C4	C3	HC31	HC32	239.9	120.0
HC31	C3	C4	O4	157.2	60.0
HC31	C3	C4	C5	38.0	300.0
HC31	C3	C4	HC4	278.3	180.0
HC32	C3	C2	HC2	190.1	60.0
C2	C3	HC32	C4	119.7	240.0
C2	C3	HC32	HC31	239.8	120.0
C4	C3	HC32	HC31	120.1	240.0
HC32	C3	C4	O4	47.7	180.1
HC32	C3	C4	C5	288.5	60.0
HC32	C3	C4	HC4	168.8	300.1
O4	C4	C3	HC31	157.2	60.0
O4	C4	C3	HC32	47.7	180.1
C3	C4	O4	C5	244.3	240.0
C3	C4	O4	HC4	124.3	120.0
C5	C4	O4	HC4	240.0	240.0
O4	C4	C5	N2	305.3	298.5
O4	C4	C5	C6	65.0	58.5
O4	C4	C5	HC5	183.0	178.6
C5	C4	C3	HC31	38.0	300.0
C5	C4	C3	HC32	288.5	60.0
C3	C4	C5	O4	113.9	120.1
C3	C4	C5	HC4	235.5	240.0
O4	C4	C5	HC4	121.6	119.9
C5	C4	O4	HO4	295.7	64.1
N2	C5	C4	C6	240.3	240.0
N2	C5	C4	HC5	122.2	119.9
C4	C5	N2	C10	227.4	251.7
C4	C5	N2	HN2	47.4	71.8
C6	C5	C4	HC5	241.9	239.9
C4	C5	C6	O6	58.8	60.0
C4	C5	C6	C7	173.3	180.0
C4	C5	C6	HC6	295.8	300.1
HC4	C4	C3	HC31	278.3	180.0
HC4	C4	C3	HC32	168.8	300.1
C3	C4	HC4	O4	242.3	240.0
C3	C4	HC4	C5	119.5	120.0
O4	C4	HC4	C5	237.2	240.0
HC4	C4	O4	HO4	55.7	184.1
HC4	C4	C5	N2	183.7	178.6
HC4	C4	C5	C6	303.4	298.5
HC4	C4	C5	HC5	61.4	58.6
HO4	O4	C4	C5	295.7	64.1
HO4	O4	C4	HC4	55.7	184.1
N2	C5	C4	HC4	183.7	178.6
C4	C5	N2	C6	122.4	120.0
C4	C5	N2	HC5	240.4	240.0
C6	C5	N2	HC5	118.1	120.0
N2	C5	C6	O6	177.1	180.0
N2	C5	C6	C7	291.5	300.0
N2	C5	C6	HC6	54.1	60.0
C10	N2	C5	HN2	180.0	179.9
C5	N2	C10	O10	351.9	0.7
C5	N2	C10	C11	172.9	180.7
C6	C5	C4	HC4	303.4	298.5
C4	C5	C6	N2	241.7	240.0
C4	C5	C6	HC5	119.5	120.1
N2	C5	C6	HC5	237.8	240.1
C6	C5	N2	C10	105.1	131.7
C6	C5	N2	HN2	285.1	311.8
O6	C6	C5	C7	245.6	240.0
O6	C6	C5	HC6	123.0	120.0
C5	C6	O6	HO6	180.0	60.0
C7	C6	C5	HC6	237.4	240.0
C5	C6	C7	O7	307.0	300.0
C5	C6	C7	C8	189.3	180.0
C5	C6	C7	HC7	68.0	59.9
HC5	C5	C4	HC4	61.4	58.6
C4	C5	HC5	N2	118.1	120.0
C4	C5	HC5	C6	237.8	239.9
N2	C5	HC5	C6	119.6	120.0
HC5	C5	N2	C10	347.0	11.7
HC5	C5	N2	HN2	167.0	191.8
HC5	C5	C6	O6	299.3	299.9
HC5	C5	C6	C7	53.7	60.0
HC5	C5	C6	HC6	176.3	180.0
C10	N2	C5	C6	105.1	131.7
C10	N2	C5	HC5	347.0	11.7
C5	N2	C10	HN2	180.0	180.1
O10	C10	N2	C11	179.0	180.1
N2	C10	C11	H111	180.0	180.1
N2	C10	C11	H112	305.3	300.0
N2	C10	C11	H113	54.7	60.0
HN2	N2	C5	C6	285.1	311.8
HN2	N2	C5	HC5	167.0	191.8
C5	N2	HN2	C10	180.0	179.9
HN2	N2	C10	O10	171.9	180.6
HN2	N2	C10	C11	352.9	0.6
O10	C10	N2	HN2	171.9	180.6
N2	C10	O10	C11	181.1	179.9
O10	C10	C11	H111	0.9	0.0
O10	C10	C11	H112	126.2	120.0
O10	C10	C11	H113	235.7	239.9
C11	C10	N2	HN2	352.9	0.6
N2	C10	C11	O10	179.0	180.1
H111	C11	C10	H112	234.7	240.0
H111	C11	C10	H113	125.3	120.1
H112	C11	C10	H113	250.6	240.0
C10	C11	H111	H112	125.3	120.0
C10	C11	H111	H113	234.8	239.9
H112	C11	H111	H113	109.5	120.0
C10	C11	H112	H111	230.6	240.0
C10	C11	H112	H113	115.3	120.0
H111	C11	H112	H113	244.6	240.0
C10	C11	H113	H111	129.3	120.1
C10	C11	H113	H112	244.7	240.0
H111	C11	H113	H112	115.4	120.0
O6	C6	C5	HC5	299.3	299.9
C5	C6	O6	C7	114.4	120.1
C5	C6	O6	HC6	237.0	240.0
C7	C6	O6	HC6	122.6	119.9
O6	C6	C7	O7	60.8	60.1
O6	C6	C7	C8	303.2	300.0
O6	C6	C7	HC7	181.9	179.9
C7	C6	C5	HC5	53.7	60.0
C5	C6	C7	O6	246.2	240.0
C5	C6	C7	HC6	123.1	120.1
O6	C6	C7	HC6	236.9	240.1
C7	C6	O6	HO6	65.6	299.9
O7	C7	C6	C8	117.6	120.0
O7	C7	C6	HC7	238.9	240.1
C6	C7	O7	HO7	180.0	300.0
C8	C7	C6	HC7	121.3	120.1
C6	C7	C8	O8	309.7	300.0
C6	C7	C8	C9	189.8	180.0
C6	C7	C8	HC8	70.1	59.9
HC6	C6	C5	HC5	176.3	180.0
C5	C6	HC6	O6	119.6	120.0
C5	C6	HC6	C7	239.8	239.9
O6	C6	HC6	C7	120.2	119.9
HC6	C6	O6	HO6	303.0	180.0
HC6	C6	C7	O7	183.8	180.0
HC6	C6	C7	C8	66.2	60.0
HC6	C6	C7	HC7	304.9	299.9
HO6	O6	C6	C7	65.6	299.9
HO6	O6	C6	HC6	303.0	180.0
O7	C7	C6	HC6	183.8	180.0
C6	C7	O7	C8	241.9	239.9
C6	C7	O7	HC7	120.6	119.9
C8	C7	O7	HC7	238.7	240.0
O7	C7	C8	O8	191.3	180.0
O7	C7	C8	C9	71.4	60.0
O7	C7	C8	HC8	311.8	299.9
C8	C7	C6	HC6	66.2	60.0
C6	C7	C8	O7	118.4	120.0
C6	C7	C8	HC7	239.4	239.9
O7	C7	C8	HC7	121.0	119.9
C8	C7	O7	HO7	298.1	60.1
O8	C8	C7	C9	120.0	120.0
O8	C8	C7	HC8	239.6	240.1
C7	C8	O8	HO8	180.0	300.0
C9	C8	C7	HC8	119.6	120.1
C7	C8	C9	O9	64.4	180.0
C7	C8	C9	HC91	189.7	300.0
C7	C8	C9	HC92	299.1	59.9
HC7	C7	C6	HC6	304.9	299.9
C6	C7	HC7	O7	239.6	240.1
C6	C7	HC7	C8	120.0	120.1
O7	C7	HC7	C8	240.4	240.0
HC7	C7	O7	HO7	59.4	180.1
HC7	C7	C8	O8	70.3	60.1
HC7	C7	C8	C9	310.3	300.1
HC7	C7	C8	HC8	190.7	180.0
HO7	O7	C7	C8	298.1	60.1
HO7	O7	C7	HC7	59.4	180.1
O8	C8	C7	HC7	70.3	60.1
C7	C8	O8	C9	241.7	239.9
C7	C8	O8	HC8	122.1	119.9
C9	C8	O8	HC8	240.4	240.0
O8	C8	C9	O9	307.2	60.0
O8	C8	C9	HC91	72.4	180.0
O8	C8	C9	HC92	181.8	299.9
C9	C8	C7	HC7	310.3	300.1
C7	C8	C9	O8	117.3	120.0
C7	C8	C9	HC8	237.8	239.9
O8	C8	C9	HC8	120.5	119.9
C9	C8	O8	HO8	298.3	60.0
O9	C9	C8	HC91	234.8	240.0
O9	C9	C8	HC92	125.3	120.1
C8	C9	O9	HO9	180.0	180.0
HC91	C9	C8	HC92	250.6	240.0
HC8	C8	C7	HC7	190.7	180.0
C7	C8	HC8	O8	241.2	240.1
C7	C8	HC8	C9	119.8	120.1
O8	C8	HC8	C9	238.6	240.0
HC8	C8	O8	HO8	57.9	180.0
HC8	C8	C9	O9	186.6	300.1
HC8	C8	C9	HC91	311.9	60.0
HC8	C8	C9	HC92	61.3	180.0
HO8	O8	C8	C9	298.3	60.0
HO8	O8	C8	HC8	57.9	180.0
O9	C9	C8	HC8	186.6	300.1
C8	C9	O9	HC91	125.2	120.0
C8	C9	O9	HC92	234.7	239.9
HC91	C9	O9	HC92	109.4	119.9
HC91	C9	C8	HC8	311.9	60.0
C8	C9	HC91	O9	234.9	240.0
C8	C9	HC91	HC92	117.5	120.0
O9	C9	HC91	HC92	242.5	240.0
HC91	C9	O9	HO9	54.7	60.1
HC92	C9	C8	HC8	61.3	180.0
C8	C9	HC92	O9	125.1	120.1
C8	C9	HC92	HC91	242.5	240.1
O9	C9	HC92	HC91	117.4	119.9
HC92	C9	O9	HO9	305.3	300.1
HO9	O9	C9	HC91	54.7	60.1
HO9	O9	C9	HC92	305.3	300.1