PDB Chemical Component HMC

Ideal Model

Chemical Description

Name 5-HYDROXYMETHYL-CHONDURITOL
Formula C7 H12 O5
Formal charge 0
Molecular weight 176.167 g/mol
Component type NON-POLYMER

Chemical features

Atom count 24
Chiral atom count 4
Chiral atoms C1 C2 C3 C4
Observed leaving atoms O1
Bond count 24
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (1S,2S,3S,4R)-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol
Systematic name (OpenEye OEToolkits) (1S,2S,3S,4R)-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol

Chemical Descriptors

Stereo SMILES (CACTVS) OCC1=C[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
SMILES (CACTVS) OCC1=C[CH](O)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1=C([C@H]([C@@H]([C@H]([C@H]1O)O)O)O)CO
InChI descriptor InChI=1S/C7H12O5/c8-2-3-1-4(9)6(11)7(12)5(3)10/h1,4-12H,2H2/t4-,5+,6-,7-/m0/s1
InChIKey descriptor PJPGMULJEYSZBS-VZFHVOOUSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1CPU
Processing site RCSB